Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11d19
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.082
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    25   0.58 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   1.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   4.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.1  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   5.4  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   7.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 0.082
 Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
 Frame = -2

Query: 236 MFLPLCSINYF*SCSGSTFGNHLLQMVT*CSCNFYYCYE--NISII*CCIVLFYYSTMLL 63
           +F  LC I YF  C+   F  HLL ++  C  +F+  +    + ++ CC  +F+   +L 
Sbjct: 140 LFFLLC-IYYF-YCAFIIFTVHLLFLL--CIYHFFCAFIIFTMHLLFCCAFIFFNMHLLF 195

Query: 62  IFFENIITCYCIFL 21
           +   +  T + +FL
Sbjct: 196 LLCLDYFTLHLLFL 209



 Score = 25.0 bits (52), Expect = 0.58
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = -2

Query: 149 CSCNFYYCYENISII*CCIVLFYYSTMLLIFFENIITCYCIFL 21
           C   FYY +   ++    ++  YY  + L F   I   YC F+
Sbjct: 112 CVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFI 154



 Score = 25.0 bits (52), Expect = 0.58
 Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
 Frame = -2

Query: 236 MFLPLCSINYF*SCSGSTFGNHLL----QMVT*CSCNFYYCYENISI---I*CCIVLFYY 78
           +FLP C I YF S     F  HLL     ++  C   FYY +   ++   +  CI  FYY
Sbjct: 207 LFLP-C-IYYFYSAF-IIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYY 263

Query: 77  STMLLIFFENIITCYCIFL 21
             +L      I T + +FL
Sbjct: 264 MHLLFCCAFIIFTMHLLFL 282


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 326 ATPQDPGASPYPLQPTDKIAPLPKQ 400
           A  +  GASPY   PT  ++P P Q
Sbjct: 303 AAKKAAGASPYSGTPTPMMSPAPPQ 327


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 363 SGYGEAPGSCGVAGCCISTQG 301
           SG   AP  CG  G C++  G
Sbjct: 29  SGRNSAPSICGEHGHCVNLPG 49


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +2

Query: 479 INALYEDFTKKMSLLLKMIQHSF 547
           +N+LY++ T+K+  + K I H +
Sbjct: 217 VNSLYQNATRKVCGVWKRIPHDY 239


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 149 CSCNFYYCYEN 117
           C   FYYCY++
Sbjct: 247 CITQFYYCYDS 257


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 15/59 (25%), Positives = 25/59 (42%)
 Frame = +2

Query: 188 NLNNFKXXXXXTMAETSGIIIFMLWYIGIAYNYYVGTLPCVEMQQPATPQDPGASPYPL 364
           NL+N          E  G+ I  + ++G+ Y  Y   L  +     ATP++  +  Y L
Sbjct: 214 NLHNKICNLIDEFNECFGLQILGILFVGVIYTTYTIFLLLIFGSGSATPENNVSVVYVL 272


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 172 WLPKVEPEQL*K*LIEHN 225
           WL  VEP    K L++HN
Sbjct: 102 WLQNVEPNLRPKLLLKHN 119


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 349 FPVPASANGQDRTTAKTVKPQV 414
           F  P+S++ Q++TT ++ K  V
Sbjct: 310 FEKPSSSSNQEKTTTESAKISV 331


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 579 EIRTEFYAMGRAM 617
           E   EFYAMGR++
Sbjct: 153 EPNNEFYAMGRSL 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,686
Number of Sequences: 336
Number of extensions: 3586
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)