Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11d19
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   0.96 
AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.        25   1.7  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    23   6.8  
AY745227-1|AAU93494.1|   99|Anopheles gambiae cytochrome P450 pr...    23   6.8  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 175  LPKVEPEQL*K*LIEHNGRNIRYYYLHALVHRDRVQLLRRY 297
            +P VEPEQL + L+ +     R+  LH L   +R     RY
Sbjct: 1523 VPYVEPEQLFELLVRNGSSGERWLRLHDLYCLNRPFFPERY 1563


>AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.
          Length = 99

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 197 CSGSTFGNHLLQMVT*CSCNFYYCYE 120
           C G  +    + +V  CSC F++C E
Sbjct: 58  CCGRGYRTQEVTVVERCSCTFHWCCE 83


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 355 RGSTWILWGCGLLHF 311
           RG  W+ W  GL HF
Sbjct: 387 RGGLWLSWEEGLQHF 401


>AY745227-1|AAU93494.1|   99|Anopheles gambiae cytochrome P450
           protein.
          Length = 99

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = -2

Query: 404 FTVLAVV-RSCPLAEAGTGKHLDPV 333
           + VLA + R C L E  TG  L+P+
Sbjct: 9   YPVLAFIERQCTLPEGSTGYKLEPL 33


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,413
Number of Sequences: 2352
Number of extensions: 14090
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)