Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11d19
         (684 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9b protein.
          Length = 625

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +2

Query: 272 IAYNYYVGTLPCVEMQQ---PATPQDPGASPYPLQPTDKIAPLPKQ 400
           +  N Y  T P  + QQ   P  PQ P A P P   T + A +P+Q
Sbjct: 390 VQVNSYYTTTPIQQQQQQQQPIPPQLPTAPPQPPPTTPQPAFVPRQ 435


>Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -3

Query: 424 CSERLVVSLFWQWCDLVRWLKRVRGSTWILWGCGLLHFNTG*GT 293
           CS+  +  +  +  ++  W KR++GS   L G G  HF    GT
Sbjct: 58  CSDEFIRKILNECGNVASW-KRIKGSNGKLQGFGFCHFTDLEGT 100


>Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -3

Query: 424 CSERLVVSLFWQWCDLVRWLKRVRGSTWILWGCGLLHFNTG*GT 293
           CS+  +  +  +  ++  W KR++GS   L G G  HF    GT
Sbjct: 58  CSDEFIRKILNECGNVASW-KRIKGSNGKLQGFGFCHFTDLEGT 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,480,189
Number of Sequences: 27780
Number of extensions: 325880
Number of successful extensions: 979
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)