BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte11d19 (684 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 28 5.4 Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 27 9.4 Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 27 9.4 >Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical protein Y57G11C.9b protein. Length = 625 Score = 28.3 bits (60), Expect = 5.4 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%) Frame = +2 Query: 272 IAYNYYVGTLPCVEMQQ---PATPQDPGASPYPLQPTDKIAPLPKQ 400 + N Y T P + QQ P PQ P A P P T + A +P+Q Sbjct: 390 VQVNSYYTTTPIQQQQQQQQPIPPQLPTAPPQPPPTTPQPAFVPRQ 435 >Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical protein W04D2.6a protein. Length = 705 Score = 27.5 bits (58), Expect = 9.4 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -3 Query: 424 CSERLVVSLFWQWCDLVRWLKRVRGSTWILWGCGLLHFNTG*GT 293 CS+ + + + ++ W KR++GS L G G HF GT Sbjct: 58 CSDEFIRKILNECGNVASW-KRIKGSNGKLQGFGFCHFTDLEGT 100 >Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical protein W04D2.6a protein. Length = 705 Score = 27.5 bits (58), Expect = 9.4 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -3 Query: 424 CSERLVVSLFWQWCDLVRWLKRVRGSTWILWGCGLLHFNTG*GT 293 CS+ + + + ++ W KR++GS L G G HF GT Sbjct: 58 CSDEFIRKILNECGNVASW-KRIKGSNGKLQGFGFCHFTDLEGT 100 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,480,189 Number of Sequences: 27780 Number of extensions: 325880 Number of successful extensions: 979 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 935 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 979 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1560745544 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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