Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11d16
         (485 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5M7F8 Cluster: MGC99096 protein; n=3; Xenopus|Rep: MGC...    35   1.1  
UniRef50_Q07G43 Cluster: Uncharacterized protein C1orf55 homolog...    33   3.4  
UniRef50_UPI0000F2CD2C Cluster: PREDICTED: similar to cell surfa...    33   4.5  
UniRef50_Q13P72 Cluster: Putative uncharacterized protein; n=1; ...    32   7.9  
UniRef50_Q7KTH4 Cluster: CG10595-PB, isoform B; n=14; Endopteryg...    32   7.9  

>UniRef50_Q5M7F8 Cluster: MGC99096 protein; n=3; Xenopus|Rep:
           MGC99096 protein - Xenopus laevis (African clawed frog)
          Length = 155

 Score = 34.7 bits (76), Expect = 1.1
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +2

Query: 92  VDNERQDEIETFYEASQRQRDYYRGLRKAYHPLTYFSDP 208
           VD +R DE++ F+ A+++ RD+YR      H + +F  P
Sbjct: 103 VDFKRSDELKQFHRAAEQHRDHYRDKSGTAHQVPHFIIP 141


>UniRef50_Q07G43 Cluster: Uncharacterized protein C1orf55 homolog;
           n=3; Xenopus|Rep: Uncharacterized protein C1orf55
           homolog - Xenopus tropicalis (Western clawed frog)
           (Silurana tropicalis)
          Length = 468

 Score = 33.1 bits (72), Expect = 3.4
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = +2

Query: 131 EASQRQRDYYRGLRKAYHPLTYFSDPEYMWQC 226
           EA + QR   R  RK   P  YF+DPEY  QC
Sbjct: 123 EAEKEQRRLERLQRKLAEPKHYFTDPEYHKQC 154


>UniRef50_UPI0000F2CD2C Cluster: PREDICTED: similar to cell surface
           glycoprotein OX2 receptor; n=1; Monodelphis
           domestica|Rep: PREDICTED: similar to cell surface
           glycoprotein OX2 receptor - Monodelphis domestica
          Length = 410

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +2

Query: 131 EASQRQRDYYRGLRKAYHPLTYFSDPEYMWQCPAEMTPTYLSFPM 265
           E+S+ QR Y    R  + P+ +   P  +W+C +E++    S+ M
Sbjct: 289 ESSRIQRSYLVWDRSVHRPIPHQEHPSLLWKCKSELSKEQQSYQM 333


>UniRef50_Q13P72 Cluster: Putative uncharacterized protein; n=1;
            Burkholderia xenovorans LB400|Rep: Putative
            uncharacterized protein - Burkholderia xenovorans (strain
            LB400)
          Length = 1238

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = +2

Query: 143  RQRDYYRGLRKAYHPLTYFSDPEYMWQCPAEMTPTYLSFPMYHVKYKQPAVLP 301
            R +D  +GL+  + P   F    Y W   A   P    FPM    +++PA  P
Sbjct: 845  RTQDLQKGLKSQFTPNPVFRWDVYNWTRTAGAQPQLARFPMNSPAWQEPAYKP 897


>UniRef50_Q7KTH4 Cluster: CG10595-PB, isoform B; n=14;
           Endopterygota|Rep: CG10595-PB, isoform B - Drosophila
           melanogaster (Fruit fly)
          Length = 1317

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 92  VDNERQDEIETFYEASQRQRDYYRGLRKAYH 184
           VD +  D I+ FY  +QR RDYYR      H
Sbjct: 25  VDYDDLDRIDNFYLETQRYRDYYRDPHNILH 55


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,732,981
Number of Sequences: 1657284
Number of extensions: 8433494
Number of successful extensions: 22578
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22573
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)