Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11d16
         (485 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g61150.2 68418.m07672 leo1-like family protein weak similarit...    28   2.9  
At5g61150.1 68418.m07671 leo1-like family protein weak similarit...    28   2.9  
At5g41810.1 68418.m05090 expressed protein                             27   6.7  
At2g16430.2 68415.m01882 purple acid phosphatase (PAP10) identic...    27   8.9  
At2g16430.1 68415.m01881 purple acid phosphatase (PAP10) identic...    27   8.9  

>At5g61150.2 68418.m07672 leo1-like family protein weak similarity
           to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
           contains Pfam profile PF04004: Leo1-like protein;
           supporting cDNA gi|21929714|gb|AF490422.1|
          Length = 623

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +2

Query: 86  LFVDNERQDEIETFYEASQRQRDY 157
           LF DN  ++EIE+ +E ++RQ +Y
Sbjct: 14  LFGDNSEEEEIESEHECNRRQPNY 37


>At5g61150.1 68418.m07671 leo1-like family protein weak similarity
           to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
           contains Pfam profile PF04004: Leo1-like protein;
           supporting cDNA gi|21929714|gb|AF490422.1|
          Length = 625

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +2

Query: 86  LFVDNERQDEIETFYEASQRQRDY 157
           LF DN  ++EIE+ +E ++RQ +Y
Sbjct: 14  LFGDNSEEEEIESEHECNRRQPNY 37


>At5g41810.1 68418.m05090 expressed protein
          Length = 288

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 19/82 (23%), Positives = 36/82 (43%)
 Frame = +2

Query: 107 QDEIETFYEASQRQRDYYRGLRKAYHPLTYFSDPEYMWQCPAEMTPTYLSFPMYHVKYKQ 286
           Q+E  T  E  +++      L    H  T      ++W C + +   Y SF +   K + 
Sbjct: 90  QNEENTKKEEEKKKETNNNNLSNMKHKKT----SSHVWDCGSTL---YDSFELNSFKRQL 142

Query: 287 PAVLPVTLGRTLAIPALPDRTL 352
            + +  +  RT+++  LPDR +
Sbjct: 143 DSAISASSARTMSMSHLPDRRI 164


>At2g16430.2 68415.m01882 purple acid phosphatase (PAP10) identical
           to purple acid phosphatase (PAP10) GI:20257482 from
           [Arabidopsis thaliana]
          Length = 468

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 300 GKTAGCLYFTWYIGKLR*VGVISAGHCHIYSGS 202
           G+T   +Y  W++ K + V V+ AGH H Y  S
Sbjct: 332 GETMRVMYEAWFV-KYK-VDVVFAGHVHAYERS 362


>At2g16430.1 68415.m01881 purple acid phosphatase (PAP10) identical
           to purple acid phosphatase (PAP10) GI:20257482 from
           [Arabidopsis thaliana]
          Length = 348

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 300 GKTAGCLYFTWYIGKLR*VGVISAGHCHIYSGS 202
           G+T   +Y  W++ K + V V+ AGH H Y  S
Sbjct: 212 GETMRVMYEAWFV-KYK-VDVVFAGHVHAYERS 242


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,693,546
Number of Sequences: 28952
Number of extensions: 183095
Number of successful extensions: 447
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 838967680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)