Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11d14
(721 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 31 1.1
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 31 1.1
AF043702-3|AAK21496.2| 474|Caenorhabditis elegans Hypothetical ... 30 1.4
AF125954-2|AAK68175.1| 193|Caenorhabditis elegans Hypothetical ... 29 2.5
AC006769-3|AAX22281.1| 196|Caenorhabditis elegans Hypothetical ... 29 2.5
Z12017-2|CAA78048.1| 455|Caenorhabditis elegans Hypothetical pr... 29 3.3
U27312-12|AAA68255.1| 451|Caenorhabditis elegans Hypothetical p... 29 3.3
EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein. 29 3.3
AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical... 29 3.3
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 29 3.3
AF022985-13|AAB69968.1| 375|Caenorhabditis elegans Hypothetical... 29 3.3
U58738-1|AAB00602.1| 290|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81082-5|CAB03093.2| 429|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z22181-7|CAA80189.2| 62|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 30.7 bits (66), Expect = 1.1
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Frame = +1
Query: 28 STKKQIMPKTGKKLENKPEPLKSSKPE------LATDSEQNVKILKKVD---SEGSN-QK 177
+T+KQ+ P+T ++L + E K + E + E+ V + +KVD EG +K
Sbjct: 1103 TTQKQVDPETIQRLRREDEVRKRKRFEEEDRRGMIRRREERVALQEKVDRMLEEGLRLEK 1162
Query: 178 I--PPRLRRNM--ERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALEEDYFLSPEQ 345
+ R+R+ ER+EM +RR+R +EK + ER K + E++ E+
Sbjct: 1163 VREAERIRQQQEEERIEMETILISRRVREEEEEKMRL---ERLRKAEREREQERLKREEE 1219
Query: 346 TE-QYFQALSESSK 384
E + + L E+ K
Sbjct: 1220 EERKRLEQLREAEK 1233
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 30.7 bits (66), Expect = 1.1
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Frame = +1
Query: 28 STKKQIMPKTGKKLENKPEPLKSSKPE------LATDSEQNVKILKKVD---SEGSN-QK 177
+T+KQ+ P+T ++L + E K + E + E+ V + +KVD EG +K
Sbjct: 1103 TTQKQVDPETIQRLRREDEVRKRKRFEEEDRRGMIRRREERVALQEKVDRMLEEGLRLEK 1162
Query: 178 I--PPRLRRNM--ERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALEEDYFLSPEQ 345
+ R+R+ ER+EM +RR+R +EK + ER K + E++ E+
Sbjct: 1163 VREAERIRQQQEEERIEMETILISRRVREEEEEKMRL---ERLRKAEREREQERLKREEE 1219
Query: 346 TE-QYFQALSESSK 384
E + + L E+ K
Sbjct: 1220 EERKRLEQLREAEK 1233
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 30.7 bits (66), Expect = 1.1
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Frame = +1
Query: 28 STKKQIMPKTGKKLENKPEPLKSSKPE------LATDSEQNVKILKKVD---SEGSN-QK 177
+T+KQ+ P+T ++L + E K + E + E+ V + +KVD EG +K
Sbjct: 1103 TTQKQVDPETIQRLRREDEVRKRKRFEEEDRRGMIRRREERVALQEKVDRMLEEGLRLEK 1162
Query: 178 I--PPRLRRNM--ERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALEEDYFLSPEQ 345
+ R+R+ ER+EM +RR+R +EK + ER K + E++ E+
Sbjct: 1163 VREAERIRQQQEEERIEMETILISRRVREEEEEKMRL---ERLRKAEREREQERLKREEE 1219
Query: 346 TE-QYFQALSESSK 384
E + + L E+ K
Sbjct: 1220 EERKRLEQLREAEK 1233
>AF043702-3|AAK21496.2| 474|Caenorhabditis elegans Hypothetical
protein W03D8.1 protein.
Length = 474
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 28 STKKQIMPKTGKKLENKPEPLKSSKPELATDSEQNVKILKKVDSEGSN 171
STK+Q++ T K LE +P K KPE E+ + + DS N
Sbjct: 263 STKEQVLTTTRKALETTKKPEKPEKPEKPERPEKPEALPQAQDSYCGN 310
>AF125954-2|AAK68175.1| 193|Caenorhabditis elegans Hypothetical
protein C13B7.6 protein.
Length = 193
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +1
Query: 106 ELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPP 285
E EQ K L K+ G ++ +P + E+ A + + +S EKC + PP
Sbjct: 10 EKGEKDEQTAKFLHKLAENGKDRGLPDCVVAQYEKNAWEATNSDEKYKSC--EKCGMPPP 67
Query: 286 ERRDKIKSALEED 324
D K+++ E+
Sbjct: 68 PPIDGAKNSVVEE 80
>AC006769-3|AAX22281.1| 196|Caenorhabditis elegans Hypothetical
protein Y45G12C.16 protein.
Length = 196
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +1
Query: 106 ELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPP 285
E EQ K L K+ G ++ +P + E+ A + + +S EKC + PP
Sbjct: 10 EKGEKDEQTAKFLHKLAENGKDRGLPDCVVAQYEKNAWEATNSDEKYKSC--EKCGMPPP 67
Query: 286 ERRDKIKSALEED 324
D K+++ E+
Sbjct: 68 PPIDGAKNSVVEE 80
>Z12017-2|CAA78048.1| 455|Caenorhabditis elegans Hypothetical
protein R08D7.2 protein.
Length = 455
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 49 PKTGKKLENKPEPLKSSKPELATDSEQNVKILKKVDSEGSNQKIPPRL 192
P T K L+ P+P+ S+K D E K+ K ++ + QK PP L
Sbjct: 219 PSTSKLLKTAPKPVLSAKDRKKED-EVLAKLRAKYGNKNALQKKPPIL 265
>U27312-12|AAA68255.1| 451|Caenorhabditis elegans Hypothetical
protein F26A1.13 protein.
Length = 451
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/97 (20%), Positives = 43/97 (44%)
Frame = +1
Query: 28 STKKQIMPKTGKKLENKPEPLKSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNME 207
+ K + P KK+ + P PL+ S P+ + E+N + K+ ++I R +
Sbjct: 259 AVKLKPKPTWSKKVASSPSPLRLSLPKKSKKEEENHFLKKRSGRHSQLEEIQLLAIRTRQ 318
Query: 208 RVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALE 318
++E ++ + + + I+ R KI+ + E
Sbjct: 319 KIEADRITSSNSMAAAKYRQLIIVDRASRMKIEKSSE 355
>EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein.
Length = 801
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = +1
Query: 106 ELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAIL 279
E+ +D+E N K LK+V + N K + +N+ER + + + + ++C ++
Sbjct: 273 EMDSDAEDNTKTLKEVMTSFRNVKKTRKREKNVERAKKMISKKKKAKKEGRSKECNLM 330
>AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical
protein Y39B6A.14 protein.
Length = 801
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = +1
Query: 106 ELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAIL 279
E+ +D+E N K LK+V + N K + +N+ER + + + + ++C ++
Sbjct: 273 EMDSDAEDNTKTLKEVMTSFRNVKKTRKREKNVERAKKMISKKKKAKKEGRSKECNLM 330
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 130 NVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKS 309
N+K VDS + + P+ N++++E + T L L + PPERR K
Sbjct: 266 NIKSWPGVDSFPHYKAVFPQWPVNLKKLEETSCLTGNGLDVL--REILRYPPERRLTAKG 323
Query: 310 ALEEDYFL 333
AL YFL
Sbjct: 324 ALSHRYFL 331
>AF022985-13|AAB69968.1| 375|Caenorhabditis elegans Hypothetical
protein T15B7.15 protein.
Length = 375
Score = 29.1 bits (62), Expect = 3.3
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Frame = +1
Query: 34 KKQIMPKTGKKLENKPEPLKSSKPELATDSEQNVKILKKVDSEG-SNQKIPPRLRRNMER 210
KKQ M + + LE K L + E+N+K+ ++ G + +K +R +E
Sbjct: 207 KKQDMLRMEQMLEEKQSELTQEIGKTQEREEENLKLRSLLEKSGQTTEKALKDSKRRLEE 266
Query: 211 VEMLARPTARRLRSLWDEKCAILPP--ERRDKIK--SALEEDYFLSPEQTEQ 354
E + T + + +E + L + DK + ++L ED L +QT +
Sbjct: 267 SENKRKTTLEKYIQIENELNSKLDEALQNSDKCQKMTSLLEDQLLREQQTRK 318
>U58738-1|AAB00602.1| 290|Caenorhabditis elegans Hypothetical
protein F31A9.4 protein.
Length = 290
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 138 FYILFGICCQFRFRTFQWLRFIFKFLSSFRHDLLFCTL 25
F++L IC +RF+ + I + F H + FC L
Sbjct: 32 FFVLLKICSLYRFQILDFFPTIQNNKNIFSHGIKFCEL 69
>Z81082-5|CAB03093.2| 429|Caenorhabditis elegans Hypothetical
protein F42G4.2 protein.
Length = 429
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 516 KRTKRDASIEQVEKHR*RCAGESR*NIGRTETISVESRTSSK 641
K T+R + + EK + + A + T+T+S+E RTSS+
Sbjct: 86 KATRRKERVVEKEKEQPKTATIRKKKQSATQTVSIEHRTSSE 127
>Z22181-7|CAA80189.2| 62|Caenorhabditis elegans Hypothetical
protein ZK632.9 protein.
Length = 62
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 444 ASATTEMAG*FQRTGGIPLV*LHSKRTKRDASIEQVEKHR*RCAGESR 587
+S EMA F++TGG L KRTK D +E KH + G++R
Sbjct: 2 SSTAEEMAAAFEQTGGPDLTTGSGKRTKSD-RVE--HKHASQPGGDTR 46
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,792,762
Number of Sequences: 27780
Number of extensions: 362611
Number of successful extensions: 1327
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1321
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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