Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11d11
(487 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32053| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_18394| Best HMM Match : TFIID-31kDa (HMM E-Value=0) 32 0.29
SB_25472| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_48435| Best HMM Match : Ion_trans (HMM E-Value=1.7e-11) 29 2.0
SB_50799| Best HMM Match : I-set (HMM E-Value=0) 29 2.7
SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22) 29 2.7
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 2.7
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_54886| Best HMM Match : SH3_2 (HMM E-Value=3.2e-24) 29 2.7
SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 29 2.7
SB_37150| Best HMM Match : 7tm_1 (HMM E-Value=0.011) 29 2.7
SB_48933| Best HMM Match : Drf_FH1 (HMM E-Value=1.4) 28 3.6
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 28 3.6
SB_56420| Best HMM Match : CUB (HMM E-Value=0.45) 28 3.6
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_41022| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_34975| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 4.7
SB_14136| Best HMM Match : Exonuc_X-T (HMM E-Value=6e-25) 28 4.7
SB_51982| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036) 28 4.7
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_22411| Best HMM Match : Kinesin (HMM E-Value=6.8e-17) 27 6.2
SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) 27 6.2
SB_3188| Best HMM Match : Hyd_WA (HMM E-Value=2e-13) 27 6.2
SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 27 8.2
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_35429| Best HMM Match : Laminin_EGF (HMM E-Value=5.3e-17) 27 8.2
SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2) 27 8.2
SB_3037| Best HMM Match : Homeobox (HMM E-Value=4.3e-27) 27 8.2
SB_33020| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22) 27 8.2
SB_17618| Best HMM Match : Bombolitin (HMM E-Value=2.1e-07) 27 8.2
>SB_32053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 33.1 bits (72), Expect = 0.12
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = -3
Query: 386 KRSARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVA 207
K A A+P+ V ++P +P P PPL +PAS T+ P ++ A+ SI +
Sbjct: 296 KPQAAASPKPVAKPIPASPPSTGKPSP-PPL---GESPASNTSPPLISAAKSESSIGKLQ 351
Query: 206 RTASLEP 186
++ + P
Sbjct: 352 KSLAFNP 358
>SB_18394| Best HMM Match : TFIID-31kDa (HMM E-Value=0)
Length = 326
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 368 TPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLAT 240
TP T ++ STP+ PR T +V+ +ATP A T SL T
Sbjct: 194 TPSTSTPISTSTPIVATLPR-TVAMVTQTATPIIAGQTLSLVT 235
>SB_25472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1191
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 305 TPPLVSWSATPASATNTPSLATARLPH 225
TPP+ W A PA+ +P AR+ +
Sbjct: 106 TPPITGWDALPAAGVTSPEAHLARIKY 132
>SB_48435| Best HMM Match : Ion_trans (HMM E-Value=1.7e-11)
Length = 1496
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -3
Query: 359 TVLAVAVSTPLERARPRPTP---PLV-SWSATPASATNTPSLATARL 231
++LA S E P PTP PL +W+ T +S T TPS T L
Sbjct: 1338 SILASHTSFGTESLAPSPTPSKEPLGGTWANTRSSLTTTPSFPTTSL 1384
>SB_50799| Best HMM Match : I-set (HMM E-Value=0)
Length = 1195
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 452 PQFVKHFSSRTKYTGQHRNFDCKRSARATP 363
P+F +H S+T G H F C S R P
Sbjct: 67 PEFTRHPRSQTIKQGNHVTFGCAASGRPQP 96
>SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22)
Length = 1249
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -3
Query: 263 TNTPSLATARLPHSIATVARTASLEP 186
TN +L+TA+LPHS+ +++ + + P
Sbjct: 21 TNNVTLSTAKLPHSLGSLSPSTPISP 46
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = -3
Query: 368 TPETVLAVAVSTPLERARPRP---TPPLVSWSATPASATNTPSLATARLPHSIATVARTA 198
TP T A +TP + P T P + TP AT TP+ T P + T +
Sbjct: 49 TPTTTTPPATTTPTKPTNTTPPATTTPTKPTTTTPP-ATTTPTTPTTTTPPATTTPTKPT 107
Query: 197 SLEP 186
+ P
Sbjct: 108 TTTP 111
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = -3
Query: 362 ETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVARTA 198
ET+ A A +TP A P PP+ TP TP+ A P +I TA
Sbjct: 84 ETIPAPAPTTPTSPATPASGPPI----RTPIPLKETPNPALESAPAAIPDATDTA 134
>SB_54886| Best HMM Match : SH3_2 (HMM E-Value=3.2e-24)
Length = 440
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -3
Query: 383 RSARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVAR 204
R+A P + A +P E + + P+++ + T SAT+ P L T HS+ TV +
Sbjct: 60 RAAATAPVRPIFTAHMSPAEA--DKLSAPILNGNHTVTSATSPPLLTTHAHHHSLQTVTK 117
>SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38)
Length = 2084
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -3
Query: 383 RSARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVAR 204
R+A P + A +P E + + P+++ + T SAT+ P L T HS+ TV +
Sbjct: 1607 RAAATAPVRPIFTAHMSPAEA--DKLSAPILNGNHTVTSATSPPLLTTHAHHHSLQTVTK 1664
>SB_37150| Best HMM Match : 7tm_1 (HMM E-Value=0.011)
Length = 211
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -3
Query: 380 SARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASA 264
SA+ + LA + PLE A P P P + ATPASA
Sbjct: 142 SAKTIVSSCLATLLVRPLETA-PAPAPTTPTSPATPASA 179
>SB_48933| Best HMM Match : Drf_FH1 (HMM E-Value=1.4)
Length = 611
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -3
Query: 371 ATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLP-HSIATVARTAS 195
ATP+ A+ TP + P P + ATPA TP + +P IAT + +
Sbjct: 25 ATPDQPKAIQPETPKDTPSMLPVPEI----ATPAQQPETPKDIPSMVPVPEIATSQQPET 80
Query: 194 LEP 186
++P
Sbjct: 81 IQP 83
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 28.3 bits (60), Expect = 3.6
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 362 ETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSL--ATARLPHSIATVARTA 198
ET A A +TP A P PP+ + P T TP+L A A +P + T TA
Sbjct: 33 ETTPAPAPTTPTSPATPASGPPI--RTPIPLKETPTPALESAPAAMPDATETAWGTA 87
>SB_56420| Best HMM Match : CUB (HMM E-Value=0.45)
Length = 1017
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -3
Query: 365 PETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLA 243
P+T + + P A PTPP + S +P S T S++
Sbjct: 546 PQTTASAFPTPPQTTASASPTPPQTTASVSPTSPQTTASVS 586
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 28.3 bits (60), Expect = 3.6
Identities = 25/62 (40%), Positives = 28/62 (45%)
Frame = -3
Query: 377 ARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVARTA 198
A PET A ++T E A P S T AT T SLAT L + A A TA
Sbjct: 84 ATTAPETTTASFLTTAPE-ATTAPETTTASLVTTAPEAT-TASLATTALLVTTAPEATTA 141
Query: 197 SL 192
SL
Sbjct: 142 SL 143
>SB_41022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Frame = -3
Query: 392 DCKRSARATPETVLAVAVSTPLERARPR---PTPPLVSWSATPASATNTPS 249
+C R+ P T L +TP R PT P S TP S N PS
Sbjct: 322 ECNRNP-CNPPTTLGTDHTTPSNTTGNRTKVPTTPRTSEGETPTSLANAPS 371
>SB_34975| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 909
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 452 PQFVKHFSSRTKYTGQHRNFDCKRSARATP 363
P+F +H S+T G H F C S R P
Sbjct: 584 PEFTRHPRSQTIKQGNHVAFGCAASGRPQP 613
>SB_14136| Best HMM Match : Exonuc_X-T (HMM E-Value=6e-25)
Length = 1597
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -3
Query: 362 ETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATA 237
ET+ A+ ++TP+ A P PP+ + P TP+L +A
Sbjct: 603 ETIPALTLTTPISPAIPASGPPIT--TPIPLKEAPTPALESA 642
>SB_51982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -3
Query: 365 PETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVARTASL 192
P T S+ +R+RP P+P V+ + SA S A+ + + T+SL
Sbjct: 159 PATKPTTGTSSRTDRSRPAPSPARVNQATATQSAKKVGSTASTEKQKKELSSSSTSSL 216
>SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)
Length = 362
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = -3
Query: 365 PETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVARTASLEP 186
P T+ +A +TPL P PP P AT TP L P T+ A+ P
Sbjct: 148 PPTIPFLATTTPLLMVTTSPLPP----PTIPFLATTTPLLMVTTSPLPPPTIPFLATTTP 203
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 282 CDSCFCNEHSFSCDSTPAS 226
C SC CN ++C TP S
Sbjct: 829 CSSCLCNGGMWNCTDTPCS 847
>SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 293 PVAVSVAVWLVQAVSTLRPQVPSQASLALIACSRSFCA 406
P+ ++A WL+ T +PSQ AL+AC+ CA
Sbjct: 737 PLEPALAQWLL----TREQMMPSQGPHALLACTNLICA 770
>SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3133
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 305 TPPLVSWSATPASATNTPSLATARLPH 225
TPP W A PA+ +P AR+ +
Sbjct: 2248 TPPKTGWDALPAAGDTSPEAHLARIKY 2274
>SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1574
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -2
Query: 294 GIVVCDSCFCNEHSFSCDSTPASLDSDGRPNG 199
G C C CN H+ C PA + G +G
Sbjct: 1339 GSCSCYECNCNGHAVKCRFDPAVYQASGNVSG 1370
>SB_22411| Best HMM Match : Kinesin (HMM E-Value=6.8e-17)
Length = 505
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -3
Query: 452 PQFVKHFSSRTKYTGQHRNFDCKRSARATPETVLAVAVSTPLERARPRPTPPLVS 288
PQ K+ +SR++ R KRS P + A +P TPP +S
Sbjct: 287 PQPSKNHASRSQSPAPPRGRSLKRSKSPAPGSAAAARSRSPSPARSSTSTPPTIS 341
>SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27)
Length = 522
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 362 ETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATA 237
ET+ A A +TP A P PP+ + P T TP+L +A
Sbjct: 425 ETIPAPAPTTPTSPATPASGPPI--RTPIPLKETPTPALESA 464
>SB_3188| Best HMM Match : Hyd_WA (HMM E-Value=2e-13)
Length = 1389
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 82 FEKLFYFVTNLQSLQWQNVDGD 147
+E++FY T + L W +DGD
Sbjct: 722 YEQIFYCPTRFEVLSWTRLDGD 743
>SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 27.1 bits (57), Expect = 8.2
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -3
Query: 380 SARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASA--TNTPSL 246
SA+ + L + PLE P PTP + ATPAS T TP L
Sbjct: 1211 SAKTIVSSCLNTLLVRPLETI-PAPTPTTPTSPATPASGPLTRTPIL 1256
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 362 ETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATA 237
ET+ A A +TP A P PP+ + P T TP L +A
Sbjct: 124 ETIPAPAPTTPTSPATPASGPPI--RTPIPLKETPTPELESA 163
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -3
Query: 374 RATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLP 228
+ATP+T TP +P+P + S P T TP+ + P
Sbjct: 17 KATPQTTPTPTKPTPTTHTPTKPSPTTPT-STAPTQTTPTPTTPSPTAP 64
>SB_35429| Best HMM Match : Laminin_EGF (HMM E-Value=5.3e-17)
Length = 218
Score = 27.1 bits (57), Expect = 8.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 294 GIVVCDSCFCNEHSFSCD 241
G C C CN HS CD
Sbjct: 14 GFSKCTRCKCNRHSLECD 31
>SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2)
Length = 782
Score = 27.1 bits (57), Expect = 8.2
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -3
Query: 362 ETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSL--ATARLPHSIAT 213
ET+ A A +TP A P PP+ + P T TP+L A A +P + T
Sbjct: 63 ETIPAPAPTTPTSPATPASGPPI--RTPIPLRETPTPALDSAPAAMPDATDT 112
>SB_3037| Best HMM Match : Homeobox (HMM E-Value=4.3e-27)
Length = 308
Score = 27.1 bits (57), Expect = 8.2
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -3
Query: 383 RSARATPETVLAVAVSTPL-ERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVA 207
++ R+ + L V+ P+ E TPP +SW A S+T S ATA +S ++
Sbjct: 223 QNRRSKFKKTLKVSEDNPVKEENSGSSTPPTISWQAHAPSSTE--SNATAE--NSKPVIS 278
Query: 206 RTASLEP 186
++ +EP
Sbjct: 279 QSGQVEP 285
>SB_33020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = -3
Query: 329 LERARPRPTPPLVSWSATPASATNTPSLATARLPHSI 219
+ R RP P PPL P T T R H+I
Sbjct: 139 VHRGRPSPVPPLPVNETAPTLVTTTSQPPAHRFCHNI 175
>SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22)
Length = 1197
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -3
Query: 323 RARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVART 201
R P P PP V T+ P A A +P++ T A T
Sbjct: 910 RKPPPPPPPRVDLEGAVVGDTSAPPSAVASIPNTWETSADT 950
>SB_17618| Best HMM Match : Bombolitin (HMM E-Value=2.1e-07)
Length = 670
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 125 CKLCKFVTK*NSFSNKHHSKINLLIFCFENNTE 27
CKLCK + K + + H ++N L+ C ++ E
Sbjct: 487 CKLCKIIFK-DDTEKEGHDRMNHLLLCDNSHCE 518
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,174,886
Number of Sequences: 59808
Number of extensions: 251425
Number of successful extensions: 4470
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 4326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4463
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1026164244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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