Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11d08
         (691 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065914-1|BAC06129.1| 1464|Homo sapiens seven transmembrane hel...    32   1.7  
U31931-1|AAA92364.1|  353|Homo sapiens class II MHC mutant RJ2.2...    31   3.9  
X74301-1|CAA52354.1| 1130|Homo sapiens (MHC) class II transactiv...    31   5.1  
U18288-1|AAA88862.1|  884|Homo sapiens MHC class II transactivat...    31   5.1  
U18259-1|AAA88861.1| 1130|Homo sapiens MHC class II transactivat...    31   5.1  
EF064747-1|ABK41930.1| 1130|Homo sapiens class II, major histoco...    31   5.1  
AY699071-1|AAU06586.1| 1107|Homo sapiens CIITA IV protein.             31   5.1  
AY084054-1|AAM15723.1|  546|Homo sapiens MHC class II transactiv...    31   5.1  
AF410154-1|AAL04118.1|  932|Homo sapiens MHC2TA protein.               31   5.1  
AB067470-1|BAB67776.1| 1480|Homo sapiens KIAA1883 protein protein.     31   5.1  
D86957-1|BAA13193.1|  508|Homo sapiens KIAA0202 protein.               30   6.8  
D86425-1|BAA13087.1| 1376|Homo sapiens osteonidogen protein.           30   6.8  
AF440762-1|AAO13879.1|  562|Homo sapiens septin SEPT8_v2 protein.      30   6.8  
AF440761-1|AAO13878.1|  508|Homo sapiens septin SEPT8_v1* protein.     30   6.8  
AF179995-1|AAG09407.1|  508|Homo sapiens septin 2 protein.             30   6.8  
AB009799-1|BAA24112.1| 1376|Homo sapiens osteonidogen protein.         30   6.8  

>AB065914-1|BAC06129.1| 1464|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 1464

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +1

Query: 358 PRYL-GSWLPDRPGVTSPRCWRRAPSSPALVPRTWPGIYSDAATT 489
           PR L  SW P  PG   PR  R   +  + +PRTWP   S A  T
Sbjct: 848 PRALPSSWTPPPPG--RPRAARAGTTCRSTLPRTWPTARSPAWVT 890


>U31931-1|AAA92364.1|  353|Homo sapiens class II MHC mutant RJ2.2.5
           protein.
          Length = 353

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 23/67 (34%), Positives = 28/67 (41%)
 Frame = +1

Query: 382 PDRPGVTSPRCWRRAPSSPALVPRTWPGIYSDAATTGRRCCSTTCPPVAPLAATRRIIPS 561
           PDRPG TSP     APS+  L     P + S A  T  +   T CP    ++      P 
Sbjct: 281 PDRPGSTSP----FAPSATDLPSMPEPALTSRANMTEHKTSPTQCPAAGEVSNKLPKWPG 336

Query: 562 YLVPIPT 582
             VP  T
Sbjct: 337 REVPRKT 343


>X74301-1|CAA52354.1| 1130|Homo sapiens (MHC) class II
           transactivator protein.
          Length = 1130

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = +1

Query: 382 PDRPGVTSPRCWRRAPSSPALVPRTWPGIYSDAATTGRRCCSTTCP 519
           PDRPG TSP     APS+  L     P + S A  T  +   T CP
Sbjct: 281 PDRPGSTSP----FAPSATDLPSMPEPALTSRANMTEHKTSPTQCP 322


>U18288-1|AAA88862.1|  884|Homo sapiens MHC class II transactivator
           CIITA protein.
          Length = 884

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = +1

Query: 382 PDRPGVTSPRCWRRAPSSPALVPRTWPGIYSDAATTGRRCCSTTCP 519
           PDRPG TSP     APS+  L     P + S A  T  +   T CP
Sbjct: 233 PDRPGSTSP----FAPSATDLPSMPEPALTSRANMTEHKTSPTQCP 274


>U18259-1|AAA88861.1| 1130|Homo sapiens MHC class II transactivator
           CIITA protein.
          Length = 1130

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = +1

Query: 382 PDRPGVTSPRCWRRAPSSPALVPRTWPGIYSDAATTGRRCCSTTCP 519
           PDRPG TSP     APS+  L     P + S A  T  +   T CP
Sbjct: 281 PDRPGSTSP----FAPSATDLPSMPEPALTSRANMTEHKTSPTQCP 322


>EF064747-1|ABK41930.1| 1130|Homo sapiens class II, major
           histocompatibility complex, transactivator protein.
          Length = 1130

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = +1

Query: 382 PDRPGVTSPRCWRRAPSSPALVPRTWPGIYSDAATTGRRCCSTTCP 519
           PDRPG TSP     APS+  L     P + S A  T  +   T CP
Sbjct: 281 PDRPGSTSP----FAPSATDLPSMPEPALTSRANMTEHKTSPTQCP 322


>AY699071-1|AAU06586.1| 1107|Homo sapiens CIITA IV protein.
          Length = 1107

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = +1

Query: 382 PDRPGVTSPRCWRRAPSSPALVPRTWPGIYSDAATTGRRCCSTTCP 519
           PDRPG TSP     APS+  L     P + S A  T  +   T CP
Sbjct: 258 PDRPGSTSP----FAPSATDLPSMPEPALTSRANMTEHKTSPTQCP 299


>AY084054-1|AAM15723.1|  546|Homo sapiens MHC class II
           transactivator CIITAmed protein.
          Length = 546

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = +1

Query: 382 PDRPGVTSPRCWRRAPSSPALVPRTWPGIYSDAATTGRRCCSTTCP 519
           PDRPG TSP     APS+  L     P + S A  T  +   T CP
Sbjct: 232 PDRPGSTSP----FAPSATDLPSMPEPALTSRANMTEHKTSPTQCP 273


>AF410154-1|AAL04118.1|  932|Homo sapiens MHC2TA protein.
          Length = 932

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = +1

Query: 382 PDRPGVTSPRCWRRAPSSPALVPRTWPGIYSDAATTGRRCCSTTCP 519
           PDRPG TSP     APS+  L     P + S A  T  +   T CP
Sbjct: 281 PDRPGSTSP----FAPSATDLPSMPEPALTSRANMTEHKTSPTQCP 322


>AB067470-1|BAB67776.1| 1480|Homo sapiens KIAA1883 protein protein.
          Length = 1480

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 343 GSCSKPRYLGSWLPDRPGVTSPRCWRRAPSSPALVPRTW 459
           GS  +P +   W P  PGV +P+  +     P LV  TW
Sbjct: 566 GSPPEPLFPNDWDPLDPGVPAPQAPQAPSEVPQLVSETW 604


>D86957-1|BAA13193.1|  508|Homo sapiens KIAA0202 protein.
          Length = 508

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = -3

Query: 518 GHVVEQHRLPVVAASEYIPGHVLGTSAGLLGARLQHLGDVTPGRSGSQLPKYRGFEQLP 342
           G    + RL  VAA   +P H  G    +    L+   +  P      L  + GF+ LP
Sbjct: 52  GRSASRSRLVPVAAPALVPAHPPGAELAMAATDLERFSNAEPEPRSLSLGGHVGFDSLP 110


>D86425-1|BAA13087.1| 1376|Homo sapiens osteonidogen protein.
          Length = 1376

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -2

Query: 255 WTPTASAPLATARGRRRSENETSP--SLPYPI 166
           W PTAS+PL T+ G+R      SP  S P P+
Sbjct: 78  WAPTASSPLRTSPGKRSMWTMISPPTSRPSPL 109


>AF440762-1|AAO13879.1|  562|Homo sapiens septin SEPT8_v2 protein.
          Length = 562

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = -3

Query: 518 GHVVEQHRLPVVAASEYIPGHVLGTSAGLLGARLQHLGDVTPGRSGSQLPKYRGFEQLP 342
           G    + RL  VAA   +P H  G    +    L+   +  P      L  + GF+ LP
Sbjct: 52  GRSASRSRLVPVAAPALVPAHPPGAELAMAATDLERFSNAEPEPRSLSLGGHVGFDSLP 110


>AF440761-1|AAO13878.1|  508|Homo sapiens septin SEPT8_v1* protein.
          Length = 508

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = -3

Query: 518 GHVVEQHRLPVVAASEYIPGHVLGTSAGLLGARLQHLGDVTPGRSGSQLPKYRGFEQLP 342
           G    + RL  VAA   +P H  G    +    L+   +  P      L  + GF+ LP
Sbjct: 52  GRSASRSRLVPVAAPALVPAHPPGAELAMAATDLERFSNAEPEPRSLSLGGHVGFDSLP 110


>AF179995-1|AAG09407.1|  508|Homo sapiens septin 2 protein.
          Length = 508

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = -3

Query: 518 GHVVEQHRLPVVAASEYIPGHVLGTSAGLLGARLQHLGDVTPGRSGSQLPKYRGFEQLP 342
           G    + RL  VAA   +P H  G    +    L+   +  P      L  + GF+ LP
Sbjct: 52  GRSASRSRLVPVAAPALVPAHPPGAELAMAATDLERFSNAEPEPRSLSLGGHVGFDSLP 110


>AB009799-1|BAA24112.1| 1376|Homo sapiens osteonidogen protein.
          Length = 1376

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -2

Query: 255 WTPTASAPLATARGRRRSENETSP--SLPYPI 166
           W PTAS+PL T+ G+R      SP  S P P+
Sbjct: 78  WAPTASSPLRTSPGKRSMWTMISPPTSRPSPL 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,091,971
Number of Sequences: 237096
Number of extensions: 1883382
Number of successful extensions: 5785
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5774
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)