Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11d07
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.34 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   7.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   7.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 502 LFCNYLVI*IARLIYHVKIFYINYEQIIAICFYF 603
           LFC   +I    L++ + I+Y     II +C Y+
Sbjct: 267 LFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYY 300


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = +1

Query: 517 LVI*IARLIYHVKIFYINYEQIIAICFYFGILMSFDFMYIYSYVSTVEFCH 669
           LV  +A L   + IF+ +Y+        F + M+    Y  + +  +++CH
Sbjct: 151 LVTIVATLTVTI-IFFASYQYGTKTYSLFIVFMTVILPYFINLLMELQYCH 200


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = +1

Query: 517 LVI*IARLIYHVKIFYINYEQIIAICFYFGILMSFDFMYIYSYVSTVEFCH 669
           LV  +A L   + IF+ +Y+        F + M+    Y  + +  +++CH
Sbjct: 151 LVTIVATLTVTI-IFFASYQYGTKTYSLFIVFMTVILPYFINLLMELQYCH 200


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,584
Number of Sequences: 336
Number of extensions: 3264
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)