Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11d07
         (706 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    34   0.11 
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ...    31   0.61 
Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical pr...    30   1.4  
AL132862-5|CAB70227.1|  419|Caenorhabditis elegans Hypothetical ...    29   2.4  
AL132862-4|CAB60533.1|  420|Caenorhabditis elegans Hypothetical ...    29   2.4  
AF043706-2|AAB97604.2|  730|Caenorhabditis elegans Hypothetical ...    29   2.4  
Z82278-10|CAC15860.2|  390|Caenorhabditis elegans Hypothetical p...    29   4.3  
U39852-7|AAK39260.1|  240|Caenorhabditis elegans Ground-like (gr...    29   4.3  
AL132943-14|CAC14395.2|  390|Caenorhabditis elegans Hypothetical...    29   4.3  
AC006696-4|AAF39985.1|  215|Caenorhabditis elegans Hypothetical ...    28   5.7  
Z92804-5|CAD89722.2|  320|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U46675-1|AAB52645.2|  524|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    28   7.5  
Z83227-3|CAB05726.2|  241|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z54342-12|CAA91145.2|  758|Caenorhabditis elegans Hypothetical p...    27   9.9  

>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +2

Query: 74  CPPVCSPPDCRPICGPASPLLCQSSVPPTQRCYPVNPC 187
           C P C P  C+P C    PL  Q+ VP   +C P  PC
Sbjct: 372 CVPSCMPA-CQPSCTNPVPLTTQAPVPVVNQCIP--PC 406


>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
            protein C08G9.2 protein.
          Length = 2224

 Score = 31.5 bits (68), Expect = 0.61
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
 Frame = +2

Query: 77   PPVCSPPDCRPI-------CGPASPLLCQSSVPPTQRCYPVNPCINIYSC 205
            P  C+ P+CRP+       CG   PL  ++ +  T  C P++ C   Y C
Sbjct: 1255 PVKCTTPECRPVAKCIPNMCGTGEPLALENHLLAT--CSPISSCPAGYHC 1302


>Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical
           protein AC3.4 protein.
          Length = 425

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +2

Query: 71  YCPPVCSPPDCRPICGPASPLLCQSSVPPTQRCYP 175
           Y P   +P  C+P C PA    C    P   +C P
Sbjct: 119 YTPTTPAPVQCQPSCMPACEQSCVVQTPAAVQCVP 153


>Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical
           protein AC3.3 protein.
          Length = 425

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +2

Query: 71  YCPPVCSPPDCRPICGPASPLLCQSSVPPTQRCYP 175
           Y P   +P  C+P C PA    C    P   +C P
Sbjct: 119 YTPTTPAPVQCQPSCMPACEQSCVVQTPAPVQCVP 153


>AL132862-5|CAB70227.1|  419|Caenorhabditis elegans Hypothetical
           protein Y73F8A.9 protein.
          Length = 419

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 89  SPPDCRPICGPASPLLCQSSVPPTQRCYP 175
           +P  C+P C PA    C +  P T +C P
Sbjct: 124 APVQCQPSCMPACEQSCVAPAPVTVQCVP 152


>AL132862-4|CAB60533.1|  420|Caenorhabditis elegans Hypothetical
           protein Y73F8A.8 protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 89  SPPDCRPICGPASPLLCQSSVPPTQRCYP 175
           +P  C+P C PA    C +  P T +C P
Sbjct: 125 APVQCQPSCMPACEQSCVAPAPVTVQCVP 153


>AF043706-2|AAB97604.2|  730|Caenorhabditis elegans Hypothetical
           protein ZC123.1 protein.
          Length = 730

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +2

Query: 86  CSPPDCRPICGPASPLLCQSSVPPTQRCYPVNPC 187
           C PP+ +P C       C +SVPP  R  P  PC
Sbjct: 200 CCPPE-QPCCPELKLDNCLASVPPCLRACPSCPC 232


>Z82278-10|CAC15860.2|  390|Caenorhabditis elegans Hypothetical
           protein Y116F11B.2 protein.
          Length = 390

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 71  YCPPVCSPPDCRPICGPASPLLCQSSVPPTQRCY-PVNPCINIYSC 205
           +C P+   PDC  +  P++   C +    T   Y  V+ CI  ++C
Sbjct: 292 FCLPMVYNPDCYGVDNPSNTDWCYTEAEVTVNYYRDVDTCIAAFTC 337


>U39852-7|AAK39260.1|  240|Caenorhabditis elegans Ground-like (grd
           related) protein 6 protein.
          Length = 240

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/42 (35%), Positives = 17/42 (40%)
 Frame = +2

Query: 80  PVCSPPDCRPICGPASPLLCQSSVPPTQRCYPVNPCINIYSC 205
           PVC PP   P      P +C    PP   C P  P +   SC
Sbjct: 52  PVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSC 93


>AL132943-14|CAC14395.2|  390|Caenorhabditis elegans Hypothetical
           protein Y116F11B.2 protein.
          Length = 390

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 71  YCPPVCSPPDCRPICGPASPLLCQSSVPPTQRCY-PVNPCINIYSC 205
           +C P+   PDC  +  P++   C +    T   Y  V+ CI  ++C
Sbjct: 292 FCLPMVYNPDCYGVDNPSNTDWCYTEAEVTVNYYRDVDTCIAAFTC 337


>AC006696-4|AAF39985.1|  215|Caenorhabditis elegans Hypothetical
           protein W08E12.6 protein.
          Length = 215

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 80  PVCSPPDCRPICGPASPLLCQSSVP 154
           P C PP   P C P++P++     P
Sbjct: 121 PACPPPCFGPACAPSAPIIVNGPPP 145



 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 80  PVCSPPDCRPICGPASPLLCQSSVP 154
           P C PP   P C P +P++     P
Sbjct: 93  PACPPPCFGPACAPPAPIIVNGPPP 117


>Z92804-5|CAD89722.2|  320|Caenorhabditis elegans Hypothetical
           protein K05D4.8 protein.
          Length = 320

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = +1

Query: 511 NYLVI*IARLIYHVKIFYINY--EQIIAICFYFGILMSFDFMYIYSYVSTVEFCHIS--L 678
           NYL I    L + V I Y  +  E++++   YF         Y++SY+S   F  IS   
Sbjct: 140 NYLKITHETLNWIVAIGYAYFVLEKVVSFWMYFCEFEDVKVFYMFSYISMHLFLLISALA 199

Query: 679 QIGLVLNL 702
            I L+LN+
Sbjct: 200 YIPLILNI 207


>U46675-1|AAB52645.2|  524|Caenorhabditis elegans Hypothetical
           protein F35A5.4 protein.
          Length = 524

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 7/39 (17%)
 Frame = +2

Query: 74  CPPVCSPPDCRPICGPASPLLC----QSSV---PPTQRC 169
           CP +CS  +C P C P     C    Q SV   PP  RC
Sbjct: 224 CPSICSQANCIPQCMPRCLPTCIQQIQISVPLPPPAPRC 262



 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
 Frame = +2

Query: 65  MGYCPPVC-----SPPDCRPICGPASPLLCQSSVPPT--QRCYPV 178
           M  C P C      P +C P C P+    C   V P+  Q+C PV
Sbjct: 112 MPLCLPACINAIQGPTECAPQCMPSCSSNCIQQVFPSCPQQCQPV 156


>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
           related) protein 4 protein.
          Length = 210

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = +2

Query: 77  PPVCSPPDCRPICGPASPLLC-QSSVPPTQRCYPVNPC 187
           PP C PP   P+C P  PL C    + P Q C P   C
Sbjct: 27  PPPCPPPP-PPMCAP-PPLPCPPPPICPPQFCPPPPMC 62


>Z83227-3|CAB05726.2|  241|Caenorhabditis elegans Hypothetical
           protein F45B8.3 protein.
          Length = 241

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
 Frame = +2

Query: 74  CPPVCSP--PDCRPICGPA-SPLLCQSSVPPTQRCYPVNPCINI 196
           CPP  +P  P C P   P  SPL+C    P      P NPC  I
Sbjct: 110 CPPPPAPAAPCCPPPPPPTPSPLVCCKQAP-----VPENPCCQI 148


>Z54342-12|CAA91145.2|  758|Caenorhabditis elegans Hypothetical
           protein C08H9.3a protein.
          Length = 758

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/33 (27%), Positives = 21/33 (63%)
 Frame = +1

Query: 541 IYHVKIFYINYEQIIAICFYFGILMSFDFMYIY 639
           I+ + +F+I+ E+ +     + IL++F  +Y+Y
Sbjct: 168 IFLMSLFFIDTERYLMAALSYSILLNFKHIYVY 200


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,544,835
Number of Sequences: 27780
Number of extensions: 297260
Number of successful extensions: 998
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)