Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11d06
(683 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 33 0.029
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 32 0.089
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 31 0.20
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 31 0.20
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 30 0.36
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 29 0.47
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 29 0.47
SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70 |Schi... 29 0.47
SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces pombe... 29 0.63
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 29 0.63
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 29 0.63
SPAC5D6.02c |mug165||sequence orphan|Schizosaccharomyces pombe|c... 29 0.63
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 29 0.83
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 28 1.1
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 28 1.1
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 28 1.1
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 28 1.1
SPCC4G3.13c |||CUE domain protein Cue1/4 family|Schizosaccharomy... 28 1.4
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 1.4
SPBC365.13c |hba1|caf1|Ran GTPase binding protein Hba1|Schizosac... 27 1.9
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 27 1.9
SPCC31H12.03c |||transcriptional regulator|Schizosaccharomyces p... 27 1.9
SPBC359.03c |||amino acid permease, unknown 8|Schizosaccharomyce... 27 2.5
SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces... 27 2.5
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 27 2.5
SPAC140.04 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.5
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 27 2.5
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 27 3.3
SPBC3B9.03 |||signal recognition particle receptor alpha subunit... 27 3.3
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 27 3.3
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 26 4.4
SPBC359.01 ||SPBPB10D8.08|amino acid permease, unknown 7|Schizos... 26 4.4
SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces pombe... 26 4.4
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 26 4.4
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 26 5.8
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 5.8
SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|ch... 26 5.8
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 5.8
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 26 5.8
SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces... 25 7.7
SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces ... 25 7.7
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 25 7.7
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 33.5 bits (73), Expect = 0.029
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +3
Query: 147 VSHRNYN--GSVRSKSPEQKSPKSLSIKSEYLEERKMETDLETR-EPEETSVNRKSNVSE 317
++ + YN GS + E+ S S S+ S + E+ K + ++ EPEET + +VS
Sbjct: 219 INAKTYNAPGSFVYEDAEKLSQLSSSLISSFSEQPKEHSPATSKHEPEETPASPTPSVSA 278
Query: 318 NKTSRRSESPIGSPVITSNIDKIANMSKVLSNEA 419
+ TSR + + ITS D+ A + S EA
Sbjct: 279 S-TSRERSTSVAPSFITS--DQAATPDVLKSEEA 309
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 31.9 bits (69), Expect = 0.089
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Frame = +3
Query: 105 LHSPIPTDHNISIEVSHRN-YNGSVRSKSPEQKSPKSLSIKSEYLEERKMETDLETREPE 281
LHS I D + + H N S++ Q KSLSI + L++ + +T
Sbjct: 252 LHSSIMNDKYVCLVSKHNNALEDKFNSEAARQLLQKSLSIVASNLKQAENKT-------- 303
Query: 282 ETSVNRKSNVSENKTSRRSESPIGSPVITSNIDKIANMSKVLSNEAKALRQSIRSLSEDI 461
S K ++++N + + T N D K L ++ KAL + +SL E +
Sbjct: 304 -ISYEEKLSIAQNSINE---------IQTQNRDLKLETEK-LQDQIKALLERNQSLQEAL 352
Query: 462 AKTKQEMSDQQEENVNF 512
K + + +E N N+
Sbjct: 353 ETVKNDEKNLREMNANY 369
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 30.7 bits (66), Expect = 0.20
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Frame = +3
Query: 213 LSIKSEYLEERKMETDLET-------REPEETSVNRKSNVSENKTSRRSESPIGSPVITS 371
L + EYLE++K + D E EP V ++E +R + P+ + + T+
Sbjct: 513 LQKRIEYLEQQKRKADAEAIANAQPGSEPLLIDVVGPDQINEI-VARWTGIPV-TRLKTT 570
Query: 372 NIDKIANMSKVLSNEAKALRQSIRSLSEDIAKTKQEMSDQQEENVNF 512
+++ NM KVLS + +++ +++ I ++ +SD + +F
Sbjct: 571 EKERLLNMEKVLSKQVIGQNEAVTAVANAIRLSRAGLSDPNQPIASF 617
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 30.7 bits (66), Expect = 0.20
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = +3
Query: 78 QSPPQLANFLHSPIPTDHNIS-IEVSHRNYNGSVRSKSPEQKSPKSLSIKSEYLEERKME 254
+SP + A L P+ S + + +++K + K KSL K +R
Sbjct: 657 RSPSKAARVLKKPLKKRVRFSEVPTTSSVPPVEIKNKDSKPKVEKSLD-KHNMNNDRSFL 715
Query: 255 TDLETREPEETSVNRKSNVSENKTSRRSESPIG--SPVITS 371
TS++ SNV++NK+S S+ P SP+IT+
Sbjct: 716 VPSRDARNSLTSLSLHSNVAKNKSSHSSKWPTHTLSPIITT 756
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 29.9 bits (64), Expect = 0.36
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +3
Query: 189 PEQKSPKSLSIKSEYLEERKMETDLETREPEETSVNRKSNVSENKTSRRSESPIGSPVIT 368
P K KS S + K TD+ +E ET V+ K++V + RR P+I
Sbjct: 228 PSAKQNKSFSGNDSH----KSLTDIRDKENGETEVSAKNHVPHRSSRRRRRHQRLIPIIY 283
Query: 369 SNIDKIANMSKVLSN 413
++++ VL N
Sbjct: 284 ETLEQMDLRKPVLVN 298
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 29.5 bits (63), Expect = 0.47
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Frame = +3
Query: 162 YNGSVRSKSPEQKSPKSLSIKSEYLEERKMET-------DLETREPEETSVN--RKSNVS 314
Y +S ++ P S IK E + RK D +T P E +V RK+ +S
Sbjct: 171 YGNDSLGESNLEELPTSDKIKGENMGSRKKRKGFVIDSEDSDTGIPREENVTITRKTKLS 230
Query: 315 EN------KTSRRSESPIGSPVITSNIDKIANMSKVLSNEAKALRQSI-RSLSEDIAKTK 473
N T R+S+S GS + +I KVLS+ ++ S L + I ++
Sbjct: 231 SNILYSDSDTERQSDS--GSKNVARQFSRIKRKRKVLSSSSEDDESSSPEDLLKPIIRST 288
Query: 474 QEMSDQQE 497
+EM + E
Sbjct: 289 EEMENLNE 296
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 29.5 bits (63), Expect = 0.47
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 231 YLEERKMETDLETREPEETSVNRKSNVSENKTSRR-SESPIGSPVITSNIDKIANMSKVL 407
YL R+ + + EE + +SNV+EN S+ S +G TSN + + SK
Sbjct: 175 YLTYRRKRHTHDPLDFEERQLTEESNVNENAISQNPSTVQLGVSASTSNFGTLKSTSKKP 234
Query: 408 SNEAKA 425
S+++ A
Sbjct: 235 SDKSWA 240
>SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 615
Score = 29.5 bits (63), Expect = 0.47
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 285 TSVNR-KSNVSENKTSRRSESPIGS--PVITSNIDKIANMSKVLSNEAKALRQSIRSLSE 455
T+ NR SN+ + S I S PV+ + + N++K +S K++ ++SL+E
Sbjct: 56 TNYNRVSSNIYDTLKEMESLQVIHSHLPVLQKGLQECQNLNKSVSQNLKSVMDILKSLAE 115
Query: 456 D 458
D
Sbjct: 116 D 116
>SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 29.1 bits (62), Expect = 0.63
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +3
Query: 219 IKSEYLEERKMETDLETREPEETSVNRKSNVSENKTSRRSESPIGSPVITSNI 377
I S+Y+++R ETD E + + E + ++ P G+P IT ++
Sbjct: 448 IASQYMDDRAFETDEEESTEFQITTKDAMKAIELLLNYEAQQPDGNPAITISL 500
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 29.1 bits (62), Expect = 0.63
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = +3
Query: 111 SPIPTDHNISIEVSHRNYNGSVRSKSPEQKSPKSLSIKSEYLEERKMETDLETREPEETS 290
S + + + S S+RN G S+ + + S+ + + + R PE T
Sbjct: 786 SVLQSQKSTSSNTSNRNNGGYSGSRPSSEMGHRYGSMSGRSMRQVSQRSTSRARSPEPT- 844
Query: 291 VNRKSNVSENKTSRRSESPIGSPVI 365
NR S S+N R + + G P++
Sbjct: 845 -NRNSVQSKNVDPRATFTAEGEPIL 868
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 29.1 bits (62), Expect = 0.63
Identities = 25/125 (20%), Positives = 61/125 (48%)
Frame = +3
Query: 141 IEVSHRNYNGSVRSKSPEQKSPKSLSIKSEYLEERKMETDLETREPEETSVNRKSNVSEN 320
+E S + +V +K E + + +++ E +++ + LE++E + + R S+ S +
Sbjct: 137 LETSQKVEIETVETKPGEPEVKQETNLQKE---KKESKVKLESKEEKISRNLRSSSRSIS 193
Query: 321 KTSRRSESPIGSPVITSNIDKIANMSKVLSNEAKALRQSIRSLSEDIAKTKQEMSDQQEE 500
+ + +SP PVI +K S+ + ++S+ S++ A++ + M+ + E
Sbjct: 194 PVTEQPQSPKIQPVIPEKKEK----SEKKESSMTLRKRSVSPSSQNTARSPKRMATEPIE 249
Query: 501 NVNFP 515
+ P
Sbjct: 250 PASSP 254
>SPAC5D6.02c |mug165||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 300
Score = 29.1 bits (62), Expect = 0.63
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Frame = +3
Query: 99 NFLHSPIPTDHNISIEVSHRNYNGSVRSKSPEQ----KSPKSLSIKSEYLEERKMETDLE 266
++ H P T ++ V+ N + S+SPE +S S +I S + RK+
Sbjct: 32 SYFHKPSSTGLFATL-VADTNSSVPSASRSPESIASSQSNDSAAIPSYRRKRRKV----- 85
Query: 267 TREPEETSVNRKSNVSENKTSRRSESPIGSPVITSNIDKIANMSKVLSNEA 419
R+PE + + K E PVI+S ID+ AN+S++ + ++
Sbjct: 86 -RKPEIVKPTLRKRGRKPKNISTLEHDKSKPVISSLIDEDANLSQIKARKS 135
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 28.7 bits (61), Expect = 0.83
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 345 PIGSPVITSNIDKIANMSKVLSNEAKALRQSIRSLSEDIAKTKQEMSDQQ 494
P S + S+++ + K LS EAK + I L + +++TK E+SD Q
Sbjct: 701 PSKSAEVYSHLETLTKTFKNLS-EAKPIFDEIELLDKRLSETKTELSDLQ 749
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 28.3 bits (60), Expect = 1.1
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +3
Query: 207 KSLSIKSEYLEERKMETDLETREPEETS--VNRKSNVSENKTSRRSESPIGSPVITSNID 380
KS S+ L TD++ R + S K ++ ++ R SE P S +TS I
Sbjct: 176 KSSSVSLSALNNYNKTTDIKARSLDRLSDMTRPKLLLNTKRSHRSSEEPGASSPVTSPIL 235
Query: 381 KIANMSKVLSNEAKALR 431
K + ++ + KA++
Sbjct: 236 KDSQKERIQALRNKAIK 252
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 28.3 bits (60), Expect = 1.1
Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 1/128 (0%)
Frame = +3
Query: 120 PTDHNISIE-VSHRNYNGSVRSKSPEQKSPKSLSIKSEYLEERKMETDLETREPEETSVN 296
P N SI VSHR + SV SKS E ++ S +E ++ + D + T V+
Sbjct: 838 PRSRNNSISNVSHRERSNSVSSKSRETRT----SASNESDPKKSTQRDSSKKLENSTVVS 893
Query: 297 RKSNVSENKTSRRSESPIGSPVITSNIDKIANMSKVLSNEAKALRQSIRSLSEDIAKTKQ 476
+ S + +S P ++ A+ N + + + +S +Q
Sbjct: 894 GSPSSSSKSDAAKSIKPQKPEPALKPVEGTADPKSTKRNHQETEKTADTDVSSTEPVKRQ 953
Query: 477 EMSDQQEE 500
+ +D ++
Sbjct: 954 KTADVNDD 961
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 28.3 bits (60), Expect = 1.1
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 9/143 (6%)
Frame = +3
Query: 108 HSPIPTDHNISIEVSHRNYNGSVRSKSPEQKSPKSLSIKSEYLEERKMETDLETREPEET 287
H P+ + + H + + +KS E S +SL + SE + K DL +
Sbjct: 559 HEPVKVTEDSQTAI-HVSKFEDLENKSME--SEQSLQLLSESENDDKPLIDLIPLLAIKR 615
Query: 288 SVNRKSNVSEN-KTSRRSESPIGSPVITSNIDKIANMSKVLSNEA-KAL---RQSIR-SL 449
N S V E K++ S++ + ++ +S+VL E KA+ Q++R S+
Sbjct: 616 KDNLVSGVLEKGKSTSTSKTKFDTSIVDFIEKPKTEISEVLPEEKRKAICDESQTVRVSI 675
Query: 450 SEDIAKTKQ---EMSDQQEENVN 509
+ KT+ +SD++ ENVN
Sbjct: 676 DRGVTKTRDVSSPVSDEKSENVN 698
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 267 TREPEETSVNRKSNVSENKTSRRSESPIGSPV 362
TR P ETS+ S V K + RS P+ SP+
Sbjct: 445 TRNPSETSLADLSRVPSYKEATRSAVPLESPL 476
>SPCC4G3.13c |||CUE domain protein Cue1/4 family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 215
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +3
Query: 327 SRRSESPIGSPVITSNIDKIANMSKVLSNEAKALRQSIRSLSEDIAKTKQEMSDQQEENV 506
S SE S +TSN+ ++ S + SNE ++L ++ +LS I+ + S E V
Sbjct: 113 SSHSEETTPSHEVTSNVSSGSSASSLASNEHRSLIETY-NLSSRISSSDNSSSSTGNEEV 171
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/89 (19%), Positives = 36/89 (40%)
Frame = +3
Query: 276 PEETSVNRKSNVSENKTSRRSESPIGSPVITSNIDKIANMSKVLSNEAKALRQSIRSLSE 455
PEE S+N SN+++ S +P ++ + E L++ +S+
Sbjct: 390 PEEASINEHSNITDEAVSLPEPVYPNAPTSAVSVHNPTISDEAEPTERAFLKKEKPQISK 449
Query: 456 DIAKTKQEMSDQQEENVNFPYHLFLLEII 542
+ + E++ P H+ +EI+
Sbjct: 450 EKKNPNVTHEEFVEKSTALPRHINKVEIV 478
>SPBC365.13c |hba1|caf1|Ran GTPase binding protein
Hba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 399
Score = 27.5 bits (58), Expect = 1.9
Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 246 KMETDLETREPEETSVNRKSNVSENKTSRRSESPI-GSPVITSNIDKIANMSKVLSNEAK 422
KME + + + ++ KSN ++++TS+R P +++ + K + + E K
Sbjct: 4 KMENNKDESISTKNALEEKSNETKDETSKRKHDPAEEESAVSTKVSKSEPLEDKGNAEVK 63
Query: 423 ALRQSIRS 446
+++ +S
Sbjct: 64 EFKETTKS 71
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +3
Query: 333 RSESPIGSPVITSNIDKIANMSKVLSNEAKALRQSIRSLSEDIAKTKQEMSDQQEENVNF 512
R E+P SP + S + + S + K Q +RS+S+ A T+ + +EEN +
Sbjct: 399 RPETP-NSPRLNSTVIQSKWDSLGHTASPKMQTQPVRSVSQSSATTETNVKPTKEENADV 457
Query: 513 P 515
P
Sbjct: 458 P 458
>SPCC31H12.03c |||transcriptional regulator|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +3
Query: 189 PEQKSPKSLSIKSEYLEERKMETDLETREPEETSVNRKSNVSENKTSRRSES-PIGSPVI 365
PE K + + E +E + ET + ETS + + + S++S S + SP +
Sbjct: 83 PESKETSAPAAAVEIEKENESIISKETSQAPETSTGAEEHQETTEESKQSVSNEVSSPDV 142
Query: 366 TSNIDKIANMSK 401
+K+ +K
Sbjct: 143 AKEQEKLIQRAK 154
>SPBC359.03c |||amino acid permease, unknown 8|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 579
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 147 VSHRNYNGSVRSKSPEQKSPKSLSIKSEYL--EERKMETDLETREPE 281
+S ++Y+ + S PE+K+P+ K +Y+ E + ++ EPE
Sbjct: 1 MSAKDYDFDIESVLPEEKAPQVSEAKKDYISQESTVLSGQVDFVEPE 47
>SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 476
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +3
Query: 273 EPEETSVNRKSNVSENKTSRRSESPIGSPVITSNIDKIANMSKVLSNEAKA 425
+P+E S+ K+N + + S + +S SP NI K+ + ++++ K+
Sbjct: 224 KPKEVSLMGKANSNRSGHSHQPQSTQFSPPANDNISKLPSSFTIVNDPLKS 274
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 27.1 bits (57), Expect = 2.5
Identities = 23/110 (20%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Frame = +3
Query: 189 PEQKSPKSLSIKSEYLEERKMETDLETREPEETSVNRKSNVSENKTSRRS-ESPIGSPVI 365
PE + + +E E + ++E RE E + ++ VS + + ++P GS
Sbjct: 357 PELNDGFNTNNAAEINPEDDEDVEIELREEEPGFLAGQTKVSLKLSPIKVVKAPDGS--- 413
Query: 366 TSNIDKIANMSKVLSNEAKALRQSIRSLSEDIAKTKQEMSDQQEENVNFP 515
+ + A ++L+N+ + +RQ L + KQ++S ++ ++ P
Sbjct: 414 ---LSRAAMQGQILANDRREIRQKEAKLKSEQEMEKQDLSLSWQDTMSNP 460
>SPAC140.04 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 295
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 171 SVRSKSPEQKSPKS-LSIKSEYLEERKMETDLETREPEETSVNRKSNVSENKTSRR 335
+V KS Q S KS L+ +E +EE+K D + + + ++ ++N+T++R
Sbjct: 2 NVGKKSEIQVSAKSNLNFLNELIEEKKRYEDEKRKISHQKYTDKLLEANDNETTKR 57
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 27.1 bits (57), Expect = 2.5
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Frame = +3
Query: 108 HSPIPTDHNISIEVSHRNYNGSVRSKSPEQKSPKSLSIKSEYLEERKMETDLETRE---P 278
H+P P+ + S +N +++ S + ++ + S Y E+ +++ D ETR P
Sbjct: 398 HNP-PSARRLP-SASSVKFNEKLKNASKQSIQNENKASYSSY-EDSEIQNDDETRTVGTP 454
Query: 279 EET-SVNR------KSNVSENKTSRRSESPIGSPV 362
ET SV R +SN+ N + SP GSP+
Sbjct: 455 TETISVVRLRRSSSQSNIEPNGVRSPTSSPTGSPI 489
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 26.6 bits (56), Expect = 3.3
Identities = 15/86 (17%), Positives = 41/86 (47%)
Frame = +3
Query: 228 EYLEERKMETDLETREPEETSVNRKSNVSENKTSRRSESPIGSPVITSNIDKIANMSKVL 407
E + +++ D+ET + + VNR+ ++ E + + + ++++ S+
Sbjct: 550 ELAKAKQISLDIETNKAQTEQVNREYSILEATLNALQKQNKQKGEV---LEQVVAESEAA 606
Query: 408 SNEAKALRQSIRSLSEDIAKTKQEMS 485
N ++ SI+ L ++A +Q ++
Sbjct: 607 KNMVESSNASIQQLKSEVADKEQTLA 632
>SPBC3B9.03 |||signal recognition particle receptor alpha subunit
Srp101|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 213 LSIKSEYLEERKMETDLETREPEETSVNRKSNVSENKTSRRS 338
L++ E LE+R++ + E + NRKS EN+T +S
Sbjct: 91 LNLFKEKLEDRQVPNEAEVEKLFAPIFNRKSAQLENETDTKS 132
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.6 bits (56), Expect = 3.3
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 381 KIANMSKVLSNEAKALRQSIRSLSEDIAKTKQEMSDQQEENVNFPYHLFLLEIIVNK 551
K A SK+ SN+ K QSI+ D+A + + Q + ++ H + + K
Sbjct: 117 KKALSSKIKSNDNKPAVQSIQRHGPDVAAPSSQPAKDQSQQISQGSHKRTINFVQQK 173
>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2100
Score = 26.2 bits (55), Expect = 4.4
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +3
Query: 294 NRKSNVSENKTSRRSESPIGSPVITSNIDKIANMSKVLSNEAKALRQSIRSLSEDIAKTK 473
+++ E + S S G P+ + N SK+ S + + +L ED TK
Sbjct: 3 SQEQQTPETREKSSSTSESGHPISLDSKTPPPNDSKIESIVKAQILFLLSTLREDQYDTK 62
Query: 474 QEMSDQQEENVNFP--YHLFLLEII 542
E +Q N N P YH FL +I
Sbjct: 63 LEQI-RQLINKNAPRVYHHFLRRLI 86
>SPBC359.01 ||SPBPB10D8.08|amino acid permease, unknown
7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 581
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 147 VSHRNYNGSVRSKSPEQKSPK-SLSIKSEYLEERKMET 257
+SH +YN + + E+++PK S+ K + +EE + T
Sbjct: 1 MSHSDYNFDIEQNAFEKEAPKVSIERKGDVVEEEVIAT 38
>SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 659
Score = 26.2 bits (55), Expect = 4.4
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +3
Query: 165 NGSVRSKSPEQKSPKSLSIKSEYLEERKMETDLETREPEETSVNRKSNVSENKTSRRSES 344
NG+ S+ + SP ++ S +K+E + E +T++ S+V+ S S
Sbjct: 111 NGTSTSEFIDSISPPLVNETSTISSSKKLEQNYSVTEVIDTNIITSSSVT-LPISEDGSS 169
Query: 345 PIGSPVITSNIDK 383
+ I SNID+
Sbjct: 170 TSAAATIDSNIDE 182
>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 171 SVRSKSPEQKSPKSLSIKSEYLEERKM--ETDLETREPEETSVNRKSNVSENKTSRRSE 341
++ + +Q +L +KS E K E + EP E S + +NVS++ + SE
Sbjct: 274 AIEEMNGKQVGDLTLVVKSAVFREDKQNDENEKNENEPIEASESAPTNVSDSTEPKASE 332
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 25.8 bits (54), Expect = 5.8
Identities = 30/128 (23%), Positives = 51/128 (39%)
Frame = +3
Query: 126 DHNISIEVSHRNYNGSVRSKSPEQKSPKSLSIKSEYLEERKMETDLETREPEETSVNRKS 305
+H+++ S + N S S +P Q K LS L TD + T + +
Sbjct: 110 EHSVNSAHSKSSSNASPESLNPSQMMSKRLS-----LPPMSQFTDSDFVNILRTPFAQST 164
Query: 306 NVSENKTSRRSESPIGSPVITSNIDKIANMSKVLSNEAKALRQSIRSLSEDIAKTKQEMS 485
++ N +SR +E P+ + + +N L + L Q + + D A+ K
Sbjct: 165 PLNRNTSSRNTEMPL----VRKDKPDFSNGHHDLIKQITEL-QDMLDKARDQARKKSRTV 219
Query: 486 DQQEENVN 509
D E VN
Sbjct: 220 DILEGKVN 227
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 25.8 bits (54), Expect = 5.8
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 393 MSKVLSNEAKALRQSIR-SLSEDIAKTKQEMSDQQEENVNFPYHLFLLEIIVNKIHMKC 566
+S+ + K+L R ++ E I K Q + + +F H F+ +++N I M C
Sbjct: 509 LSEFVHQRQKSLTPKQRIAIQELILKFMQRNFENSLYHQSFSSHWFISRLLINPIRMLC 567
>SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 244
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +3
Query: 156 RNYNGSVRSKSPEQKSPKSLSIKSEYLEERKMETDLETREPEETSVNRKSNVSENKTSRR 335
RNY S RS+ +Q+ + Y +ER +++ + + R+ ++ S R
Sbjct: 17 RNYESS-RSRG-DQRDRDYREYRRNYRDERSSRRYEDSQRRDYSPARRRDRYERHRESVR 74
Query: 336 SESP 347
ESP
Sbjct: 75 EESP 78
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.8 bits (54), Expect = 5.8
Identities = 26/124 (20%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +3
Query: 141 IEVSHRNYNGSVRSKSPEQKSPKSLSIKSEYL----EERKMETDLETREPEETSVNRKSN 308
IEV + + S+ + EQ + ++KSE L + K++ DL E ++ S+
Sbjct: 758 IEVQNVSSQLSICNSQLEQSNHIVDNLKSENLLLTSVKDKLKADLSNLE------SKLSS 811
Query: 309 VSENKTSRRSESPIGSPVITSNIDKIANMSKVLSNEAKALRQSIRSLSEDIAK-TKQEMS 485
+ ++ +++ + T+ +D + + LSN+ + + S+D+ + T Q
Sbjct: 812 LQQDNFHMKAQIESSNQEYTATVDSMNSRILELSNDLRVANSKLSECSDDVRRLTLQNSF 871
Query: 486 DQQE 497
D +E
Sbjct: 872 DLRE 875
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 25.8 bits (54), Expect = 5.8
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +3
Query: 180 SKSPEQKSPKSLSIKSEYLEERKMETDLETREPEETSVNRKSNVSENKTSRR 335
+K PE SPK KSE +++ K + ET P S N + V N+ R
Sbjct: 182 AKEPEFSSPKPKPAKSEPVKQSKPKA-TETARPSSFSRN-EDRVKMNRMRLR 231
>SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 578
Score = 25.4 bits (53), Expect = 7.7
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 189 PEQKSPKSLSIKSEYLEERKMETDLET----REPEETSVNRKSNVSENKTSRRSES 344
PE+K + LS + + R+++ L+ P N +NVS++++ SES
Sbjct: 519 PEKKKGRVLSETEQAEKIRRLQQQLDRFAGKTSPTSPESNNAANVSDSESDNESES 574
>SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 846
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -3
Query: 399 YSYWLFYQYC*L-SLEILLGFQIFSKFYFQTH 307
YSYWL+Y Y + SL + F+ F + H
Sbjct: 571 YSYWLYYMYANMTSLNSWRKIRGFNTFVLRPH 602
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 25.4 bits (53), Expect = 7.7
Identities = 21/102 (20%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Frame = +3
Query: 210 SLSIKSEYLEERKMETDLETREPEETSVNRKSNVSENKTSRR--SESPIGSP-----VIT 368
S S+ + +++ + L+ +PE+ N ++NK S + +G+P +
Sbjct: 30 SYSLPAPVAQKKNAQIPLKASKPEDPFANLFQKKTDNKISLKELERQKVGTPDSNSTPKS 89
Query: 369 SNIDKIANMSKVLSNEAKALRQSIRSLSEDIAKTKQEMSDQQ 494
SN D N+ ++L + R + + I + K+ +S Q
Sbjct: 90 SNYDPFENL-EILHQLSNTPRDKDAVIHDKIEENKRPISQPQ 130
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,475,717
Number of Sequences: 5004
Number of extensions: 46336
Number of successful extensions: 242
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 315915086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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