Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11d06
(683 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_07_0124 - 13085820-13085997,13086235-13086362,13086475-130865... 36 0.040
03_06_0222 + 32466379-32466741,32466849-32466948,32467443-324675... 33 0.16
02_02_0277 + 8489717-8491468,8491571-8491610,8491719-8491841,849... 32 0.37
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 32 0.49
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 31 0.85
02_03_0401 - 18604244-18604303,18605059-18605346,18605459-186055... 31 0.85
06_01_0318 - 2284481-2284594,2285340-2286044,2286589-2286609,228... 31 1.1
03_05_0342 + 23309476-23309598,23310176-23310413,23310755-233109... 31 1.1
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 31 1.1
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 30 2.0
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 30 2.0
05_01_0471 - 3751497-3751522,3751760-3751800,3752466-3752507,375... 29 2.6
09_03_0042 + 11842263-11842698,11842799-11842896,11843082-118432... 29 3.4
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 29 4.5
06_03_1451 + 30252366-30252373,30252621-30252867,30253441-302538... 29 4.5
05_01_0334 - 2642998-2643063,2643125-2643169,2643552-2643617,264... 29 4.5
12_02_0770 - 23007202-23007333,23007475-23007555,23007642-230077... 28 6.0
12_01_0593 + 4856934-4857053,4857145-4857271,4857931-4858136 28 6.0
06_03_0938 - 26126669-26127115,26127197-26127619,26127727-26128047 28 6.0
02_04_0606 + 24297392-24299241,24299424-24299484,24299626-24300087 28 6.0
07_03_1302 + 25618621-25620495 28 7.9
07_03_0998 - 23214548-23214567,23215424-23216120 28 7.9
06_03_0333 - 19658344-19658363,19659286-19659916 28 7.9
04_04_1107 - 30954647-30954769,30955052-30955141,30955309-309556... 28 7.9
03_05_0290 - 22791338-22791925,22792012-22793196,22793835-227939... 28 7.9
>10_07_0124 -
13085820-13085997,13086235-13086362,13086475-13086550,
13086726-13086803,13086985-13087064,13087411-13087480,
13087730-13087887,13088225-13088315,13088379-13088455,
13088612-13088686,13088798-13089071,13089911-13090041,
13090154-13090323,13090413-13090971,13091077-13091127
Length = 731
Score = 35.5 bits (78), Expect = 0.040
Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Frame = +3
Query: 264 ETREPEETSVNRKS-NVSENKTSRRSESPIGSPVITSNIDKIANMSKVLSNEAKALRQSI 440
+ +E + T+++ S ++++K RRS + G+ + N DK+A + L + + S+
Sbjct: 556 KVKELQSTTISTDSVRITKDKWPRRSTNSTGNSTVALN-DKVAML---LDDVTRKFLVSV 611
Query: 441 RSLSEDIAKTKQEMSDQQEENVNFPYHLFLLEIIVNKIHMKCDCFDVDGNNLVILATFLG 620
L + +S Q + P + L+++ + H+KC C N + +LA+
Sbjct: 612 ECLPFHEIVCFKNVSILQSALIGNPRRMVQLDLVKSHKHLKCSC--CRKNGIAVLASMHD 669
Query: 621 KPTYCPL 641
C L
Sbjct: 670 TSIMCNL 676
>03_06_0222 +
32466379-32466741,32466849-32466948,32467443-32467547,
32467627-32467789,32467995-32468115,32468625-32468705,
32468813-32468911,32468955-32468986,32468987-32469137,
32469477-32469563,32470290-32470409,32470514-32470645,
32470743-32470840,32470919-32471042,32471126-32471233,
32471822-32471957,32472751-32472861,32472963-32473026,
32473133-32473205,32473762-32473938,32474012-32474122,
32474189-32474449,32474811-32474981,32475073-32475228,
32475590-32475823,32475936-32476103,32476316-32476425,
32476513-32477041
Length = 1394
Score = 33.5 bits (73), Expect = 0.16
Identities = 31/129 (24%), Positives = 56/129 (43%)
Frame = +3
Query: 126 DHNISIEVSHRNYNGSVRSKSPEQKSPKSLSIKSEYLEERKMETDLETREPEETSVNRKS 305
DH + N + S+ + E+ P S +++ +LE+ DL R+ +++ V
Sbjct: 619 DHRTYASDADVNVSESIWQELEEEMIPSSSIVRTNWLEK---SPDL--RKYKDSCVCVVG 673
Query: 306 NVSENKTSRRSESPIGSPVITSNIDKIANMSKVLSNEAKALRQSIRSLSEDIAKTKQEMS 485
+ + R+ P+ PV+ S I I +S L + EDIA TK +S
Sbjct: 674 EAVKVRIELRN--PLQIPVVVSCISLICQLSTSLDASSAVNSVLTTGAGEDIANTKPAIS 731
Query: 486 DQQEENVNF 512
+++ NF
Sbjct: 732 TFEDDGNNF 740
>02_02_0277 +
8489717-8491468,8491571-8491610,8491719-8491841,
8491959-8492014
Length = 656
Score = 32.3 bits (70), Expect = 0.37
Identities = 24/125 (19%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Frame = +3
Query: 84 PPQLANFLHSPIPTDHNISIEVSHR--NYNGSVRSKSPEQKSPKSLSIKSEYL---EERK 248
PP FL H++ ++ R ++ + +++P K PK+ + E+RK
Sbjct: 436 PPIDVRFLDRSDSVKHHMVLDSKSRPLSHTPTYSARTPSMKKPKAKDPDKRDMTIDEKRK 495
Query: 249 METDLETREPEETSVNRKSNVSENKTSRRSESPIGSPVITSNIDKIANMSKVLSNEAKAL 428
+ +L+ PE+ V + ++N + R+ + I + + + + + + + ++N K L
Sbjct: 496 LSNNLQNLPPEKLDVVVQIIKNKNLSVRQHDDEIEVEIDSMDTETLWELDRFVANYKKNL 555
Query: 429 RQSIR 443
+ R
Sbjct: 556 SKQKR 560
>03_01_0049 +
418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 31.9 bits (69), Expect = 0.49
Identities = 35/137 (25%), Positives = 61/137 (44%)
Frame = +3
Query: 93 LANFLHSPIPTDHNISIEVSHRNYNGSVRSKSPEQKSPKSLSIKSEYLEERKMETDLETR 272
L NFL+ PT IS+ + N +G+V + KS S S + + L+ R
Sbjct: 109 LTNFLNLVDPTA--ISLPLKRCN-SGTVLQLKVQYLGAKSKS--SGVRSWKDLSPRLDDR 163
Query: 273 EPEETSVNRKSNVSENKTSRRSESPIGSPVITSNIDKIANMSKVLSNEAKALRQSIRSLS 452
P ++ KS+ S++ +R S G+P+ + D++ N + +S A +S S S
Sbjct: 164 SPTNDDIDSKSDGSDSVANRSVRSSSGNPLGGTTQDELGN--REMSFSASGSHRS--SNS 219
Query: 453 EDIAKTKQEMSDQQEEN 503
D + +S + N
Sbjct: 220 GDSTADRTNLSPRDSSN 236
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 31.1 bits (67), Expect = 0.85
Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Frame = +3
Query: 237 EERKMETDLETREPEETSVNRK-SNVSENKTSRRSE-SPIGSPVITSNIDKIANMSKVL- 407
E K++ ++ + E + +K S+V EN SE + + + +K A S+
Sbjct: 151 EHEKLQKEISSLSQENQELKKKISSVLENSDRAESEVASLKEALAQQEAEKEAAFSQCQQ 210
Query: 408 -SNEAKALRQSIRSLSEDIAKTKQEMSDQQEENVNFPYHLFLLEIIVNKIHMKCD 569
S+ +AL+ I E+ + K+EM + E LLE ++ + D
Sbjct: 211 SSDRLQALKSEILQTQEEFKRLKEEMQNGLENLSTAEERCLLLERANQNLYSELD 265
>02_03_0401 -
18604244-18604303,18605059-18605346,18605459-18605562,
18605640-18605686,18605790-18605860,18606482-18606601,
18606686-18606856,18607304-18607393,18608949-18609041,
18609141-18609461
Length = 454
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 408 SNEAKALRQSIRSLSEDIAKTKQEMSDQQEENVNFPYH 521
S + K LR SIR+ D ++++SD++ E VN+P+H
Sbjct: 118 SPKVKLLRSSIRAYHGD---AEEKLSDRKGEPVNYPFH 152
>06_01_0318 -
2284481-2284594,2285340-2286044,2286589-2286609,
2287186-2287257,2287762-2287842,2288059-2288133,
2288197-2288484
Length = 451
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/81 (22%), Positives = 32/81 (39%)
Frame = +3
Query: 153 HRNYNGSVRSKSPEQKSPKSLSIKSEYLEERKMETDLETREPEETSVNRKSNVSENKTSR 332
H + R + + S S ++ + E R ++D R S +R N +
Sbjct: 310 HDRHAREDRDRDYRRSSYSSRNVDRQGRERRDRDSDRHGRSSARRSRSRSPNRGRTEGEN 369
Query: 333 RSESPIGSPVITSNIDKIANM 395
SP G P SN+ K+ ++
Sbjct: 370 HRSSPFGRPPEPSNLAKLKDL 390
>03_05_0342 +
23309476-23309598,23310176-23310413,23310755-23310996,
23311139-23311288,23312180-23312188
Length = 253
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = +3
Query: 249 METDLETREPEETSVNRKSNVSENKTSRRSESPIGSPVITSNIDKIANMSKVLSNEAKAL 428
M D + E NR E++ S SE P G P I S K S++ S + K +
Sbjct: 114 MILDSDGSENVSLKSNRNGVSDESQESEDSEGPAGPPYILSWKSK----SRLSSLQKKII 169
Query: 429 RQSIRSLSEDI 461
++ +RS+ ++
Sbjct: 170 KEKVRSIQSEV 180
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 3/115 (2%)
Frame = +3
Query: 147 VSHRNYNGSVRSKSPEQKSPKSLSIKSEYLE---ERKMETDLETREPEETSVNRKSNVSE 317
+ H+ K ++L + LE E+K + E +E +NRK + E
Sbjct: 576 IDHQRLENEELLKRERADLQRNLQLHRHELEMEMEKKQASKERELEEKENELNRKMDFVE 635
Query: 318 NKTSRRSESPIGSPVITSNIDKIANMSKVLSNEAKALRQSIRSLSEDIAKTKQEM 482
N+ R +E + S I KI K L E + L + + L D A ++++
Sbjct: 636 NELKRAAE------LNESKIQKILLEKKQLQKEKEVLVEDRQKLETDKADIRRDI 684
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +3
Query: 150 SHRNYNGS-VRSKSPEQKSPKSLSIKSEYLEERKMETDLETREPEETSVNRKS-NVSENK 323
S +++G+ V ++ +QKS E L + K+E +TR ++ +K N++E++
Sbjct: 354 SDSSFSGAEVEARKSKQKSKHKKKHLPESLSDSKVEVGRDTRRHQKREHRKKKRNITESE 413
Query: 324 TSRRSESPI 350
+S SE I
Sbjct: 414 SSSDSEVDI 422
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/89 (21%), Positives = 43/89 (48%)
Frame = +3
Query: 84 PPQLANFLHSPIPTDHNISIEVSHRNYNGSVRSKSPEQKSPKSLSIKSEYLEERKMETDL 263
P + ++ L P P D + S+E S ++ S E + S ++ LE+ E +
Sbjct: 1105 PSEDSSALEEP-PQDDSASVEPSENTI--TLEKASEEDEGSVKPSEGNDALEKTLEEDEA 1161
Query: 264 ETREPEETSVNRKSNVSENKTSRRSESPI 350
+ PE+++ K + ++ ++++E P+
Sbjct: 1162 SAKLPEDSTTFEKPSEKDDAGTKQTEDPV 1190
>05_01_0471 - 3751497-3751522,3751760-3751800,3752466-3752507,
3753249-3753310,3753398-3753584,3753692-3753826,
3753872-3753948,3754005-3754076,3754389-3754588,
3754675-3755020,3755463-3755519,3755655-3757433,
3757539-3757720,3757943-3758072
Length = 1111
Score = 29.5 bits (63), Expect = 2.6
Identities = 38/171 (22%), Positives = 68/171 (39%), Gaps = 10/171 (5%)
Frame = +3
Query: 108 HSPIPTDHNISIEVSHRNYNGSVRSKSPEQKSPKS------LSIKSEYL-EERKMETDL- 263
H P T N S+ ++ + PEQ P+ LS ++L EE K L
Sbjct: 551 HVPEETQANASLPCPGQHVPDNASLPCPEQHVPEETQINAGLSCPDQHLPEETKFNVSLA 610
Query: 264 --ETREPEETSVNRKSNVSENKTSRRSESPIGSPVITSNIDKIANMSKVLSNEAKALRQS 437
+ PEET V + + ++ P ++ + + +S + + Q+
Sbjct: 611 YPDQHVPEETQVTAGISCPDQHVPEETQVNASLPSPNQHVPEETKATAAISCPDQHVTQA 670
Query: 438 IRSLSEDIAKTKQEMSDQQEENVNFPYHLFLLEIIVNKIHMKCDCFDVDGN 590
SLS+ K E + E+N + L++I+++ I K D D+ N
Sbjct: 671 NASLSQHEFGAKVEDNTSLEQNQG---NAELIKIVLDLI-KKTDSLDMRQN 717
>09_03_0042 +
11842263-11842698,11842799-11842896,11843082-11843217,
11843349-11843509,11843603-11843753,11843855-11843952,
11844142-11844277,11844404-11844532,11844622-11844720,
11844814-11844909,11845002-11845100,11845201-11845296,
11846394-11846628,11846752-11846873,11846993-11847114,
11847275-11847345,11847940-11848027,11848374-11848439,
11848676-11848795
Length = 852
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 228 EYLEERKMETDLETREPEETSVNRKSNVSENKTSRRSESPIGSPVITS 371
E E RK + D+E++ P E +++ + + + T+ R++ SP S
Sbjct: 396 EVCEIRKQKNDVESKHPSEVVLSQTGSANGHNTTDRTDGRNKSPKFVS 443
>12_01_0220 -
1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 8/98 (8%)
Frame = +3
Query: 72 APQSPPQLANFLHSPIPTDHNI--SIEVSHRNYNGSVR------SKSPEQKSPKSLSIKS 227
+P PP L+N L P I IE+ R +R K P + P KS
Sbjct: 55 SPAQPPPLSNLLAGPAFDAEQIWSQIELLSRPLIPHLRRQLRRLEKQPPSQPPPRTESKS 114
Query: 228 EYLEERKMETDLETREPEETSVNRKSNVSENKTSRRSE 341
EE+ E D E E +E + +V + + S E
Sbjct: 115 ADAEEKSEEEDEEDGEGDE-ELEELDDVDDEEESEEEE 151
>06_03_1451 +
30252366-30252373,30252621-30252867,30253441-30253893,
30253971-30254555
Length = 430
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +3
Query: 168 GSVRSKSPEQKSPKSLSIKSEYLEERKMETDLETREP--EETSVNRKSNVSENKTSRRSE 341
GS+ SK+ + P S S + +T++ ++ E + +S SEN +
Sbjct: 140 GSLSSKNKKDSGPDSSETNSGISSQFVFQTNVRKKDSLLAELVTDHRSLPSENDS----- 194
Query: 342 SPIGSPVITSNIDKIANMSKVLSNEA 419
IGSP + S + +AN++ LS A
Sbjct: 195 --IGSPFVLSKVMYLANINDSLSASA 218
>05_01_0334 -
2642998-2643063,2643125-2643169,2643552-2643617,
2643625-2643730,2643770-2644349,2645780-2645871,
2645969-2646035,2646126-2646231,2646628-2646708,
2646789-2647058,2647158-2648788,2648834-2649385,
2650602-2651324,2651451-2651526
Length = 1486
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/85 (29%), Positives = 38/85 (44%)
Frame = +3
Query: 108 HSPIPTDHNISIEVSHRNYNGSVRSKSPEQKSPKSLSIKSEYLEERKMETDLETREPEET 287
+SP +I V+ R+ + +PE P+ K L+ + +TR+ E
Sbjct: 592 NSPQKRTGSIQEGVTTRSKRRKLTELTPE---PEKQMYKGSILQGNPGDLKAKTRDKEAK 648
Query: 288 SVNRKSNVSENKTSRRSESPIGSPV 362
SV KSNV K SR + G+PV
Sbjct: 649 SVPAKSNVL--KISRDGDKCHGAPV 671
>12_02_0770 -
23007202-23007333,23007475-23007555,23007642-23007742,
23007855-23008455,23008742-23009365,23010294-23010377
Length = 540
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 177 RSKSPEQKSPKSLSIKSEYLEERKMETDLETREPEETSVNRKSNV-SENKTSRRSE 341
R K + + L+ K+E + RKM+ + T+E E ++ + + SE K R +
Sbjct: 436 RGKKDKLSDAEMLAKKAEAAQRRKMQVEKATKESEAEAIRKILGLDSEKKKEERKQ 491
>12_01_0593 + 4856934-4857053,4857145-4857271,4857931-4858136
Length = 150
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/46 (30%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +3
Query: 363 ITSNIDKIANMSKVLSNEAKALRQSIRSLSED--IAKTKQEMSDQQ 494
+++ +D + + +L E KAL+Q + SLS++ I + +QEM +++
Sbjct: 46 VSAEMDFLGQQNIMLDLENKALKQRLESLSQEHLIKRFQQEMFERE 91
>06_03_0938 - 26126669-26127115,26127197-26127619,26127727-26128047
Length = 396
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +3
Query: 279 EETSVNRKSNVSENKTSRRSESPIGSPVITSNIDKIANMSKVLSNEAKALRQSIRSLSED 458
E+TS++ NV T+RRS +P +P+ + + K +E +AL +R SE+
Sbjct: 65 EQTSLSLDLNVGLPSTARRSSAP-AAPIKVLVEENFLSFKK--DHEVEALEAELRRASEE 121
Query: 459 IAK 467
K
Sbjct: 122 NKK 124
>02_04_0606 + 24297392-24299241,24299424-24299484,24299626-24300087
Length = 790
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +3
Query: 132 NISIEVSHRNYNGSVRSKSPEQKSPKSLSIKSEYLEERKMETDLETREPEETSVNRKSNV 311
N+ E S N NG KSP KS + I++E LEE +E R+ + VN++ +
Sbjct: 534 NLDGEESFGNMNGGCDIKSP--KSSSAPDIQTEALEESIQ--SVEGRKTDHILVNQEESQ 589
Query: 312 SENKTSR 332
+ + +R
Sbjct: 590 LDEELTR 596
>07_03_1302 + 25618621-25620495
Length = 624
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 363 ITSNIDKIANMSKVLSNEAKALRQSIRSLSEDIAK 467
+ S I + S V SNE KAL QS+ S +I+K
Sbjct: 569 LDSKIISTLSTSLVASNEGKALLQSLPDFSAEISK 603
>07_03_0998 - 23214548-23214567,23215424-23216120
Length = 238
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 180 SKSPEQKSPKSLSIKSEYLEERKMETDLETREPEETSV 293
SKSP Q S S S+YLEE +E E +P E +
Sbjct: 3 SKSPHQSSESDDSSSSDYLEELILE---EINDPMEAEI 37
>06_03_0333 - 19658344-19658363,19659286-19659916
Length = 216
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 180 SKSPEQKSPKSLSIKSEYLEERKMETDLETREPEETSV 293
SKSP Q S S S+YLEE +E E +P E +
Sbjct: 3 SKSPHQSSESDDSSSSDYLEELILE---EINDPMEAEI 37
>04_04_1107 -
30954647-30954769,30955052-30955141,30955309-30955617,
30955732-30955842,30955945-30956379,30956452-30956610,
30957044-30957994,30959016-30959483
Length = 881
Score = 27.9 bits (59), Expect = 7.9
Identities = 26/131 (19%), Positives = 55/131 (41%), Gaps = 1/131 (0%)
Frame = +3
Query: 81 SPPQLANFLHSPIPTDHNISIEVSHRNYNGSVRSKSPEQKSPKSLSIKSEYLEERKMETD 260
SP + + L P +H+I S ++S +K+ ++S Y+E+ + E
Sbjct: 193 SPAAVQHTLARKEPVNHSIHRGESCNETLDKTTARSSSRKARLQAGVESIYIEKLQPERP 252
Query: 261 LETREPEETSVNRKSNVSENKTSRRSESPIGSPVITSNIDKIANMSKVLSNE-AKALRQS 437
++ P+ + ++V + + + P+ I+S + N+S + E A+ L Q+
Sbjct: 253 IQESTPQAQACPPSNSVRGDHA--QGQQPLVD--ISSREQRAKNVSSTMEREKAEPLNQA 308
Query: 438 IRSLSEDIAKT 470
KT
Sbjct: 309 SELKKAQAGKT 319
>03_05_0290 -
22791338-22791925,22792012-22793196,22793835-22793904,
22795918-22795979
Length = 634
Score = 27.9 bits (59), Expect = 7.9
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +3
Query: 117 IPTDHNISIEVSHR---NYNGSVRSKSPEQKSPKSLSIKSEYLEERKMETDLETREPEET 287
+PT +I+ S R N GS RS + KS KS K + L ++
Sbjct: 538 VPTSSDINSFSSLRLANNSGGSERSSGSSDINNKSCDDKSS----SKSKGSLMPKKILSK 593
Query: 288 SVNRKSNVSENKTSRRSESP 347
+ K+N SEN +S SESP
Sbjct: 594 LWSGKTNASENSSSDTSESP 613
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,299,917
Number of Sequences: 37544
Number of extensions: 243020
Number of successful extensions: 763
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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