Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11d06
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    26   1.3  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   3.9  
AY146730-1|AAO12090.1|  131|Anopheles gambiae odorant-binding pr...    23   9.0  
AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding pr...    23   9.0  

>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
 Frame = +3

Query: 285 TSVNRKSNVSENKTSRRSESPIGSPVITSNIDKIANMSKVLSNEA-KALRQSIRSLSEDI 461
           T ++R  + S+ K   ++     +P  +   D+  ++ K L+  A K  R  I +   + 
Sbjct: 348 TRMSRGRSRSQTKRYSQTVESTNAPSRSPGPDEEPSVYKSLAEAASKMARSFIPAREPED 407

Query: 462 AKTKQEMSDQQEENVNFPYHLFL 530
             T    S ++E+N + PY  +L
Sbjct: 408 LHTTTHKSPEREDNPSQPYEAYL 430


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/46 (23%), Positives = 25/46 (54%)
 Frame = +3

Query: 363 ITSNIDKIANMSKVLSNEAKALRQSIRSLSEDIAKTKQEMSDQQEE 500
           +T+N+  + + +KVL  E + L+  +  L   + ++K  +S  + E
Sbjct: 448 LTANLATLKDETKVLLEEKEKLQTELIELKRAVDESKSALSIAESE 493


>AY146730-1|AAO12090.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP22 protein.
          Length = 131

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 174 HCHYNFYEILQSKYYDQLGLDCEGNW 97
           HC      +  + Y D+ G+D + NW
Sbjct: 47  HCFVRCIGLELNLYDDKYGVDLQANW 72


>AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding
           protein OBPjj83b protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 174 HCHYNFYEILQSKYYDQLGLDCEGNW 97
           HC      +  + Y D+ G+D + NW
Sbjct: 60  HCFVRCIGLELNLYDDKYGVDLQANW 85


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,318
Number of Sequences: 2352
Number of extensions: 10128
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)