Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11d06
(683 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 27 0.13
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 27 0.22
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 27 0.22
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 27 0.22
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 27 0.22
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 2.1
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 6.3
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 21 8.3
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 27.5 bits (58), Expect = 0.13
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 255 TDLETREPEETSVNRKSNVSENKTSRRSESPIGSPVITSNIDKIANMSKVLSNE 416
+D+E R +T++N VS+N S SE + ++ D ++ S + S+E
Sbjct: 330 SDVEERRVSKTAMNSNQIVSDNSLS-SSEEKLKQDILNLRTDISSSSSSISSSE 382
Score = 22.6 bits (46), Expect = 3.6
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +3
Query: 192 EQKSPKSLSIKSEYLEERKMETDLETREPEETSVNRKSNVSENKTSRR 335
EQK P S + + +TD E P+ +V + +KT R+
Sbjct: 1128 EQKDPVIFSTSFDSKVMTRPDTDSENWTPKMMAVEPTDKQANSKTRRQ 1175
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 26.6 bits (56), Expect = 0.22
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +3
Query: 126 DHNISIEVSHRNYNGSVRSKSP--EQKSPKSLSIKSEYLEERKMETDLETREPEETSVNR 299
D N R Y K E+K+ + +S E++ + + E RE ETS R
Sbjct: 7 DRNREYRKKDRQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNEREYREYRETSRER 66
Query: 300 KSNVSENKTSR 332
+ E + S+
Sbjct: 67 SRDRKERERSK 77
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 26.6 bits (56), Expect = 0.22
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +3
Query: 126 DHNISIEVSHRNYNGSVRSKSP--EQKSPKSLSIKSEYLEERKMETDLETREPEETSVNR 299
D N R Y K E+K+ + +S E++ + + E RE ETS R
Sbjct: 7 DRNREYRKKDRQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNEREYREYRETSRER 66
Query: 300 KSNVSENKTSR 332
+ E + S+
Sbjct: 67 SRDRKERERSK 77
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 26.6 bits (56), Expect = 0.22
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +3
Query: 126 DHNISIEVSHRNYNGSVRSKSP--EQKSPKSLSIKSEYLEERKMETDLETREPEETSVNR 299
D N R Y K E+K+ + +S E++ + + E RE ETS R
Sbjct: 7 DRNREYRKKDRQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNEREYREYRETSRER 66
Query: 300 KSNVSENKTSR 332
+ E + S+
Sbjct: 67 SRDRKERERSK 77
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 26.6 bits (56), Expect = 0.22
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +3
Query: 126 DHNISIEVSHRNYNGSVRSKSP--EQKSPKSLSIKSEYLEERKMETDLETREPEETSVNR 299
D N R Y K E+K+ + +S E++ + + E RE ETS R
Sbjct: 7 DRNREYRKKDRQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNEREYREYRETSRER 66
Query: 300 KSNVSENKTSR 332
+ E + S+
Sbjct: 67 SRDRKERERSK 77
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.4 bits (48), Expect = 2.1
Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +3
Query: 126 DHNISIEVSHRNYNG--SVRSKSPEQKSPKSLSIKSEYLEERKMETDLETREPEETSVNR 299
D N R Y + + K E+++ + +S E+R + + R+ ETS R
Sbjct: 240 DRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQRSYKNENSYRKYRETSKER 299
Query: 300 KSNVSENKTSR 332
+ E + SR
Sbjct: 300 SRDRIERERSR 310
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 59 KVLHCTTITTTTGQFPSQSN 118
+V C +TTT+G F + N
Sbjct: 136 QVFDCRYVTTTSGMFEALCN 155
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 112 VQSQLIIIFRLKYLIEIIM 168
V SQ++I+F L I I+M
Sbjct: 2 VNSQILILFILSLTITIVM 20
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,505
Number of Sequences: 438
Number of extensions: 3197
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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