Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11d04
(630 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81594-1|CAB04745.1| 908|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z46381-1|CAA86513.1| 437|Caenorhabditis elegans Hypothetical pr... 31 0.51
AF082012-1|AAD03024.1| 437|Caenorhabditis elegans UDP-N-acetylg... 31 0.51
Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical pr... 31 0.90
L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy c... 31 0.90
L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated p... 31 0.90
AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear recep... 31 0.90
AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear recep... 31 0.90
AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear recep... 31 0.90
AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormo... 31 0.90
AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 31 0.90
AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy... 31 0.90
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 1.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 1.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 1.2
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 1.2
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 1.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 1.6
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 30 1.6
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 29 2.1
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 29 2.1
AF039037-7|AAC48231.3| 441|Caenorhabditis elegans Nuclear hormo... 29 2.1
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 2.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 2.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 2.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 2.7
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 25 4.0
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 25 4.2
Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 28 4.8
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 28 4.8
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 28 4.8
AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical... 28 4.8
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 28 4.8
Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z78417-2|CAB01692.1| 258|Caenorhabditis elegans Hypothetical pr... 28 6.3
U53343-5|AAA96222.1| 556|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 27 8.4
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 27 8.4
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 27 8.4
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 27 8.4
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 27 8.4
AL023493-2|CAD44137.1| 909|Caenorhabditis elegans Hypothetical ... 27 8.4
AL023493-1|CAA18898.1| 947|Caenorhabditis elegans Hypothetical ... 27 8.4
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 8.4
>Z81594-1|CAB04745.1| 908|Caenorhabditis elegans Hypothetical
protein T20F10.1 protein.
Length = 908
Score = 31.9 bits (69), Expect = 0.39
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +3
Query: 162 PKPIVGKPCEPPTPSGAPPAQRAPVAPYCHCDAHSYSPRVEQYKQLLEKE-QKLCQDYEQ 338
P P +P EPP + P R + PY + + +E+ ++L Q Y++
Sbjct: 394 PPPQYNQPSEPPPKRVSSPIDRTLLEPYIKNTRRVQPCKPNMLRFYMEQHVERLLQQYKE 453
Query: 339 LRKQMVSVTNDILDHPCDD-LDSKMTTMYQATYKK 440
K+M + +++ D + +KM + Q K
Sbjct: 454 REKRMKQLEKEMVSAQLPDIMRNKMLGLLQQKESK 488
>Z46381-1|CAA86513.1| 437|Caenorhabditis elegans Hypothetical
protein M01F1.1 protein.
Length = 437
Score = 31.5 bits (68), Expect = 0.51
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 9/68 (13%)
Frame = +3
Query: 114 KMDFVTNTHNDYQWPFPKPIVGKPCEPPTPSGA---------PPAQRAPVAPYCHCDAHS 266
++ N++N WP P P++ C P A P AQ+ P+ CD S
Sbjct: 72 RLRITPNSNNPNNWPHPIPVIVFSCNRPDSVRAHVEKLIMYRPSAQQFPITVSQDCDNES 131
Query: 267 YSPRVEQY 290
VE++
Sbjct: 132 VKKEVEKF 139
>AF082012-1|AAD03024.1| 437|Caenorhabditis elegans
UDP-N-acetylglucosamine:a-3-D-mannosideb-1,
2-N-acetylglucosaminyltransferase I protein.
Length = 437
Score = 31.5 bits (68), Expect = 0.51
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 9/68 (13%)
Frame = +3
Query: 114 KMDFVTNTHNDYQWPFPKPIVGKPCEPPTPSGA---------PPAQRAPVAPYCHCDAHS 266
++ N++N WP P P++ C P A P AQ+ P+ CD S
Sbjct: 72 RLRITPNSNNPNNWPHPIPVIVFSCNRPDSVRAHVEKLIMYRPSAQQFPITVSQDCDNES 131
Query: 267 YSPRVEQY 290
VE++
Sbjct: 132 VKKEVEKF 139
>Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical
protein W04D2.1a protein.
Length = 920
Score = 30.7 bits (66), Expect = 0.90
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3
Query: 192 PPTPSGAPPAQRAPVAP----YCHCDAHSYSPRVEQYKQLLEKEQKLCQDYEQLRKQMVS 359
PP PP QR VAP DA + + R+ + ++ ++ +K+ +DYE L +++
Sbjct: 260 PPPVIRQPPPQRVVVAPPPERDWRKDAETAANRICRVLKVNQENEKMMEDYENLASDLLA 319
Query: 360 VTN 368
N
Sbjct: 320 WIN 322
>L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy
chain protein.
Length = 815
Score = 30.7 bits (66), Expect = 0.90
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +3
Query: 210 APPAQRAPVAPYCHCDAHSYSP-RVEQYKQLLEKE---QKLCQDYEQLRKQMV 356
APP + P + Y RV+ Y+QL EK+ QK+ Q+ E+LR+Q++
Sbjct: 412 APPMLTSTTGPITDEEKKKYEEERVKLYQQLDEKDDEIQKVSQELEKLRQQVL 464
>L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated
protein 116 protein.
Length = 815
Score = 30.7 bits (66), Expect = 0.90
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +3
Query: 210 APPAQRAPVAPYCHCDAHSYSP-RVEQYKQLLEKE---QKLCQDYEQLRKQMV 356
APP + P + Y RV+ Y+QL EK+ QK+ Q+ E+LR+Q++
Sbjct: 412 APPMLTSTTGPITDEEKKKYEEERVKLYQQLDEKDDEIQKVSQELEKLRQQVL 464
>AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 618
Score = 30.7 bits (66), Expect = 0.90
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 192 PPTPSGAPPAQRAPVAPYCHCDAHSYSPRVEQYKQLLEKEQKLCQDYEQLRK-QMVSVTN 368
PP+P + P + AP+ P H R +Q++Q ++Q+ Q RK M ++ +
Sbjct: 29 PPSPLTSLPQKPAPLMPSGHVTTVDQQNR-QQHQQQQRQQQQAQQQNSMARKYSMDTIQH 87
Query: 369 DILDHP 386
+ HP
Sbjct: 88 HTMQHP 93
>AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 624
Score = 30.7 bits (66), Expect = 0.90
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 192 PPTPSGAPPAQRAPVAPYCHCDAHSYSPRVEQYKQLLEKEQKLCQDYEQLRK-QMVSVTN 368
PP+P + P + AP+ P H R +Q++Q ++Q+ Q RK M ++ +
Sbjct: 31 PPSPLTSLPQKPAPLMPSGHVTTVDQQNR-QQHQQQQRQQQQAQQQNSMARKYSMDTIQH 89
Query: 369 DILDHP 386
+ HP
Sbjct: 90 HTMQHP 95
>AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 619
Score = 30.7 bits (66), Expect = 0.90
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 192 PPTPSGAPPAQRAPVAPYCHCDAHSYSPRVEQYKQLLEKEQKLCQDYEQLRK-QMVSVTN 368
PP+P + P + AP+ P H R +Q++Q ++Q+ Q RK M ++ +
Sbjct: 28 PPSPLTSLPQKPAPLMPSGHVTTVDQQNR-QQHQQQQRQQQQAQQQNSMARKYSMDTIQH 86
Query: 369 DILDHP 386
+ HP
Sbjct: 87 HTMQHP 92
>AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform d protein.
Length = 659
Score = 30.7 bits (66), Expect = 0.90
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 192 PPTPSGAPPAQRAPVAPYCHCDAHSYSPRVEQYKQLLEKEQKLCQDYEQLRK-QMVSVTN 368
PP+P + P + AP+ P H R +Q++Q ++Q+ Q RK M ++ +
Sbjct: 66 PPSPLTSLPQKPAPLMPSGHVTTVDQQNR-QQHQQQQRQQQQAQQQNSMARKYSMDTIQH 124
Query: 369 DILDHP 386
+ HP
Sbjct: 125 HTMQHP 130
>AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform c protein.
Length = 733
Score = 30.7 bits (66), Expect = 0.90
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 192 PPTPSGAPPAQRAPVAPYCHCDAHSYSPRVEQYKQLLEKEQKLCQDYEQLRK-QMVSVTN 368
PP+P + P + AP+ P H R +Q++Q ++Q+ Q RK M ++ +
Sbjct: 140 PPSPLTSLPQKPAPLMPSGHVTTVDQQNR-QQHQQQQRQQQQAQQQNSMARKYSMDTIQH 198
Query: 369 DILDHP 386
+ HP
Sbjct: 199 HTMQHP 204
>AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy
chain protein.
Length = 815
Score = 30.7 bits (66), Expect = 0.90
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +3
Query: 210 APPAQRAPVAPYCHCDAHSYSP-RVEQYKQLLEKE---QKLCQDYEQLRKQMV 356
APP + P + Y RV+ Y+QL EK+ QK+ Q+ E+LR+Q++
Sbjct: 412 APPMLTSTTGPITDEEKKKYEEERVKLYQQLDEKDDEIQKVSQELEKLRQQVL 464
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 162 PKPIVGKPCEPPTPSGAPPAQRAPVAPYCHCDAHSYSPRVEQY 290
P P+ P PP P PP P+ Y C +++ +P QY
Sbjct: 58 PPPMCPPPPPPPPPPMCPPPP-PPMPSYSPCQSYAPAPVFNQY 99
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 168 PIVGKPCEPPTPSGAPPAQRAPVAP 242
PI G P PP P G PP P P
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPP 761
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 168 PIVGKPCEPPTPSGAPPAQRAPVAP 242
PI G P PP P G PP P P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPP 745
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 168 PIVGKPCEPPTPSGAPPAQRAPVAP 242
PI G P PP P G PP P P
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPP 761
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 168 PIVGKPCEPPTPSGAPPAQRAPVAP 242
PI G P PP P G PP P P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPP 745
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 156 PFPKPIVGKPCEPPTPSGAPPAQRAP 233
P P P V P PTP PPAQ+ P
Sbjct: 158 PPPPPPVSVPSSKPTPPPPPPAQQKP 183
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 156 PFPKPIVGKPCEPPTPSGAPPAQRAP 233
P P P V P PTP PPAQ+ P
Sbjct: 158 PPPPPPVSVPSSKPTPPPPPPAQQKP 183
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 168 PIVGKPCEPPTPSGAPPAQRAPVAP 242
PI G P PP P G PP P P
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPP 344
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 168 PIVGKPCEPPTPSGAPPAQRAPVAP 242
PI G P PP P G PP P P
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPP 328
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 5/34 (14%)
Frame = +3
Query: 156 PFPKPIVGKPCEPPTPSG-----APPAQRAPVAP 242
P P P+ G P PP PSG PP + PV P
Sbjct: 105 PPPPPMFGAPPPPPPPSGLGVAPQPPRPKTPVNP 138
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical protein
F54D11.2 protein.
Length = 1145
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 6/35 (17%)
Frame = +3
Query: 156 PFPKPIVGKPC------EPPTPSGAPPAQRAPVAP 242
P P PI+ P +PP PS APP R PV P
Sbjct: 1105 PPPLPILQNPVATPMSQQPPLPSPAPPPPRGPVDP 1139
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 29.9 bits (64), Expect = 1.6
Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 4/98 (4%)
Frame = +3
Query: 165 KPIVGKPCEPPTPSGAPPAQRAPVAPYCHCDAHSYSPRV----EQYKQLLEKEQKLCQDY 332
KP + C P+ PPA APVAP ++ K+ EK+ K +
Sbjct: 39 KPPMKPACSTIQPTDFPPASAAPVAPKVEEKKEEKKEEEKKADDEKKKTEEKDDKKSKKT 98
Query: 333 EQLRKQMVSVTNDILDHPCDDLDSKMTTMYQATYKKRS 446
E+ K V T + D D K + K++S
Sbjct: 99 EEKDKISVKKTQETKSERKDKKDEKKEDEKKEESKEKS 136
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 480 SSQSSAPIPVESNRLGLLRCYKDPTHFSENPPKVRPSIHPP 602
SS S+ P+PV S G + P + N P V SI+ P
Sbjct: 198 SSSSTVPVPVASAPPGATQLSAAPVSYQPNAPPVIASINAP 238
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 480 SSQSSAPIPVESNRLGLLRCYKDPTHFSENPPKVRPSIHPP 602
SS S+ P+PV S G + P + N P V SI+ P
Sbjct: 198 SSSSTVPVPVASAPPGATQLSAAPVSYQPNAPPVIASINAP 238
>AF039037-7|AAC48231.3| 441|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 204 protein.
Length = 441
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +3
Query: 261 HSYSPRVEQYKQLLEKEQKLCQDYEQLRKQMVSVTNDILDHPCDDLDSKMTTMYQATYKK 440
HS + +E+ KE + ++ K + + D+++H LD K+TT TY
Sbjct: 131 HSENQPLEENSSEFGKEIVVLPRIKEPPKSIEAQVTDLINHLMH-LDLKITTFRDCTYNP 189
Query: 441 RSFP 452
SFP
Sbjct: 190 MSFP 193
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = +3
Query: 186 CEPPTP---SGAPPAQRAPVAPYCHCDAHSYSPRVEQYKQLLEKEQKLCQDYEQLRKQMV 356
C PP P APP P P C C V+ + ++ + + + E+LR+ +
Sbjct: 39 CAPPPPPMCGCAPPPPPPPPPPMCGCGCGRKKRSVDDVEGVINMDSDVECNNEELREVL- 97
Query: 357 SVTNDILDHPCDDLDS 404
N++ P D L S
Sbjct: 98 --ENNMKSTPSDSLVS 111
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 162 PKPIVGKPCEPPTPSGAPPAQRAP 233
P P G P PP P G+PP P
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLP 313
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 135 THNDYQWPFPKPIVGKPCEPPTPSGAPP 218
T N ++ P G P PP P G+PP
Sbjct: 221 TQNGFRGKRQAPPAGSPPPPPPPKGSPP 248
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 162 PKPIVGKPCEPPTPSGAPPAQRAP 233
P P G P PP P G+PP P
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLP 334
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 135 THNDYQWPFPKPIVGKPCEPPTPSGAPP 218
T N ++ P G P PP P G+PP
Sbjct: 242 TQNGFRGKRQAPPAGSPPPPPPPKGSPP 269
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 162 PKPIVGKPCEPPTPSGAPPAQRAP 233
P P G P PP P G+PP P
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLP 319
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 135 THNDYQWPFPKPIVGKPCEPPTPSGAPP 218
T N ++ P G P PP P G+PP
Sbjct: 227 TQNGFRGKRQAPPAGSPPPPPPPKGSPP 254
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 24.6 bits (51), Expect(2) = 4.0
Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +3
Query: 135 THND-YQWPFPKPIVGKPCEPPTPS 206
TH D Y+W V K PPTP+
Sbjct: 383 THRDSYRWATKPDTVPKQTPPPTPN 407
Score = 22.2 bits (45), Expect(2) = 4.0
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 192 PPTPSGAPPAQRAPVA 239
PP P APP + P++
Sbjct: 434 PPPPPSAPPTIKFPIS 449
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 24.6 bits (51), Expect(2) = 4.2
Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +3
Query: 135 THND-YQWPFPKPIVGKPCEPPTPS 206
TH D Y+W V K PPTP+
Sbjct: 390 THRDSYRWATKPDTVPKQTPPPTPN 414
Score = 22.2 bits (45), Expect(2) = 4.2
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 192 PPTPSGAPPAQRAPVA 239
PP P APP + P++
Sbjct: 441 PPPPPSAPPTIKFPIS 456
>Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 449 PGSRLQNYHGLVAIISSDSCGVESSWPPS 535
P S L+N H LV ++ G+ SW PS
Sbjct: 438 PQSLLKNLHFLVGARGKETMGIGGSWSPS 466
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 449 PGSRLQNYHGLVAIISSDSCGVESSWPPS 535
P S L+N H LV ++ G+ SW PS
Sbjct: 438 PQSLLKNLHFLVGARGKETMGIGGSWSPS 466
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 165 KPIVGKPCEPPTPSGAPPAQRAPVAP 242
+P V KP PTP A PA ++P +P
Sbjct: 51 RPTVAKPAPKPTPKSA-PAPKSPKSP 75
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 183 PCEPPTPSGAPPAQRAPVAPYCHCDAHSYSPRVEQYKQLLEKEQKLCQDYEQ 338
P P P+ AP + APVAP ++ + K++++ +DY +
Sbjct: 421 PAPEPVPAPAPAPEAAPVAPSADAGGYAAAAAPAGGGSYPAKKRRVARDYAE 472
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +3
Query: 147 YQWPFPKPIVGKPCEP--PTPSGAPPAQRAPVAP 242
+QW F +P KP P P PSG PP P P
Sbjct: 544 FQWIFGRP---KPSGPAGPAPSGEPPGPFDPSGP 574
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 165 KPIVGKPCEPPTPSGAPPAQRAPVAP 242
+P V KP PTP A PA ++P +P
Sbjct: 51 RPTVAKPAPKPTPKSA-PAPKSPKSP 75
>AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 449 PGSRLQNYHGLVAIISSDSCGVESSWPPS 535
P S L+N H LV ++ G+ SW PS
Sbjct: 438 PQSLLKNLHFLVGARGKETMGIGGSWSPS 466
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 449 PGSRLQNYHGLVAIISSDSCGVESSWPPS 535
P S L+N H LV ++ G+ SW PS
Sbjct: 438 PQSLLKNLHFLVGARGKETMGIGGSWSPS 466
>Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical
protein E01B7.1 protein.
Length = 410
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 162 PKPIVGKPCEPPT-PSGAPPAQRAPVAP 242
P + +P PP+ PS PPA PVAP
Sbjct: 358 PVAMTQRPMIPPSLPSSTPPAPLKPVAP 385
>Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical
protein ZK265.2 protein.
Length = 381
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 9/54 (16%)
Frame = +3
Query: 162 PKPIVGKPCEPPTPSGAPPAQRAPVAP-YCH--------CDAHSYSPRVEQYKQ 296
P P K + P P+ P APVAP H DAH +P + YK+
Sbjct: 319 PAPAAPKGYDAPAPTAPHPPPPAPVAPPKLHDYESPAPVADAHDAAPAAQPYKR 372
>Z78417-2|CAB01692.1| 258|Caenorhabditis elegans Hypothetical
protein C35C5.3b protein.
Length = 258
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 321 IISVLFRAAVCIVLLSVNRNEHHND 247
II VLF +VC VL +V+ EH +D
Sbjct: 19 IIGVLFFMSVCDVLRTVSAEEHSHD 43
>U53343-5|AAA96222.1| 556|Caenorhabditis elegans Hypothetical
protein F22F4.1 protein.
Length = 556
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Frame = +3
Query: 180 KPCEPPTPSGAPPAQ-----RAPVAPYCHCDAHSYSPR 278
KP E PTP+ PP Q RAP+ P YSP+
Sbjct: 54 KPTEAPTPAPTPPPQSSEIRRAPINPLI-SSMDGYSPQ 90
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +3
Query: 156 PFPKPIVGKPCEPPTPSGAPPAQRAPVAPYCHCDAHSYSP 275
P P V + PTPS APPAQ+A A SP
Sbjct: 404 PQQAPPVQQNPPKPTPSPAPPAQKAQPVTQQQASAPPTSP 443
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 183 PCEPPTPSGAPPAQRAPVAP 242
PCE P G PP Q P P
Sbjct: 201 PCEAPPGDGGPPGQPGPDGP 220
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 183 PCEPPTPSGAPPAQRAPVAP 242
PCE P G PP Q P P
Sbjct: 182 PCEAPPGDGGPPGQPGPDGP 201
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 177 GKPCEPPTPSGAPPAQRAPVAPY 245
G PPT GAP QR P A Y
Sbjct: 1096 GASAPPPTSYGAPTPQRPPQASY 1118
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 177 GKPCEPPTPSGAPPAQRAPVAPY 245
G PPT GAP QR P A Y
Sbjct: 1116 GASAPPPTSYGAPTPQRPPQASY 1138
>AL023493-2|CAD44137.1| 909|Caenorhabditis elegans Hypothetical
protein H20J18.1b protein.
Length = 909
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 138 HNDYQWPFPKPIVGKPCEPPTPSGAPPAQRAPVAPYCH 251
H Q F I PC PP P G P P CH
Sbjct: 256 HQMQQSQFVNAIANPPC-PPPPPGIPSMPWPISTPVCH 292
>AL023493-1|CAA18898.1| 947|Caenorhabditis elegans Hypothetical
protein H20J18.1a protein.
Length = 947
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 138 HNDYQWPFPKPIVGKPCEPPTPSGAPPAQRAPVAPYCH 251
H Q F I PC PP P G P P CH
Sbjct: 256 HQMQQSQFVNAIANPPC-PPPPPGIPSMPWPISTPVCH 292
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 156 PFPKPIVGKPCEPPTPSGAPPAQRAPVAP 242
P P +P +P PSG PAQ P P
Sbjct: 556 PVYGPTPSEPAKPSMPSGESPAQPEPSIP 584
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,890,066
Number of Sequences: 27780
Number of extensions: 269132
Number of successful extensions: 1687
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1659
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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