Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11d04
         (630 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      28   0.086
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   1.1  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    22   4.3  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          22   5.7  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   5.7  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   7.5  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   7.5  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   7.5  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   7.5  

>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 0.086
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = +3

Query: 243 YCHCDAHSYSPRVEQYKQLLEKEQKLCQDYEQLRKQMVSVTNDILDHP 386
           Y H D+  Y P + +YK  +E+++    +  Q+ +   S  + +L+ P
Sbjct: 164 YHHMDSVEYKPEIMEYKPDVEEQRYKQVEISQMTEPSSSTKSYVLEGP 211


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
 Frame = +3

Query: 156 PFPKPIVGKPCEPPTPSGAPPAQRAPVAPYCHCDAH---SYSPRVEQYKQLLEK 308
           P   P   +   PP PS  PP    P AP     +    S +  + Q +QLL++
Sbjct: 27  PHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMISPASGIHQMQQLLQQ 80


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 307 KNRNYAKTMNSCGNRWSASQM 369
           KNRNYA  ++S  ++ S+  M
Sbjct: 3   KNRNYALDVSSAASKTSSKVM 23


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 258 HHNDSRAQLELVERVELL 205
           HH+D+R    LV R +LL
Sbjct: 122 HHDDARPHTYLVTRQKLL 139


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 351 MVSVTNDILDHPCDDLDSKMTTMYQATYKKRS 446
           +V +   ++ HP D     + T Y+A Y K S
Sbjct: 151 IVGIVMVLIIHPGDPRIKSVVTAYKADYTKIS 182


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -1

Query: 318 ISVLFRAAVCIVLLSVNRNEHHNDSRAQLELVERVELLTALE 193
           + VLF AA  I         H  DS+ + + V+ V +L ++E
Sbjct: 4   LGVLFIAAWFIACTHSFPGAHDEDSKEERKNVDTVLVLPSIE 45


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -1

Query: 318 ISVLFRAAVCIVLLSVNRNEHHNDSRAQLELVERVELLTALE 193
           + VLF AA  I         H  DS+ + + V+ V +L ++E
Sbjct: 4   LGVLFIAAWFIACTHSFPGAHDEDSKEERKNVDTVLVLPSIE 45


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -1

Query: 318 ISVLFRAAVCIVLLSVNRNEHHNDSRAQLELVERVELLTALE 193
           + VLF AA  I         H  DS+ + + V+ V +L ++E
Sbjct: 4   LGVLFIAAWFIACTHSFPGAHDEDSKEERKNVDTVLVLPSIE 45


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 147 YQWPFPKPIVGKPCEPPTPSGAP 215
           Y+   P P +G     PTP+G P
Sbjct: 110 YRSASPSPGMGHMGHTPTPNGHP 132


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,044
Number of Sequences: 438
Number of extensions: 3513
Number of successful extensions: 36
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)