Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11d03
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   4.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.1  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    22   5.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   5.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -2

Query: 476 CLYKFFCHVYCCFSHYYLC 420
           C+Y F+C +      YY C
Sbjct: 284 CIYYFYCALIILLCIYYFC 302



 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/19 (36%), Positives = 8/19 (42%)
 Frame = -2

Query: 476 CLYKFFCHVYCCFSHYYLC 420
           C+Y FFC       H   C
Sbjct: 165 CIYHFFCAFIIFTMHLLFC 183


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +3

Query: 177 CFSDKDFRTCVNIECPSV 230
           CF +     C  +ECP V
Sbjct: 696 CFCENGNNKCFTMECPQV 713


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 293 KRSTTFNNASSWIVIAYLQRLD 228
           KR+T FN+ +  I  AY  +LD
Sbjct: 253 KRATRFNDFNEAIKEAYFPKLD 274


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 67  NIKFCFSHSHS*KWLNKMMDF 129
           N+ + F H  S KWLN +  F
Sbjct: 393 NLDWTFCHMVSHKWLNYINQF 413


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 137 KKKKSIILFSHFQLWEWEKQ 78
           KK+K  +LFS  Q +E E++
Sbjct: 39  KKRKRRVLFSKAQTYELERR 58


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 427 IFVGKQPQGRDLYTVTFIG 371
           +FV  QP  RD Y +  +G
Sbjct: 415 LFVNNQPYSRDSYNLAGMG 433


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,552
Number of Sequences: 336
Number of extensions: 4199
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)