Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11d02
         (646 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032643-4|CAA21662.1|  436|Caenorhabditis elegans Hypothetical ...   185   3e-47
Z81077-3|CAB03067.1|  527|Caenorhabditis elegans Hypothetical pr...    74   1e-13
U21323-13|AAA62547.2|  284|Caenorhabditis elegans Hypothetical p...    62   2e-10
AF125451-6|AAD12825.1|  554|Caenorhabditis elegans Hypothetical ...    58   5e-09
Z99278-1|CAB16490.1|  793|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z92831-2|CAB07368.2|  861|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U23450-6|AAK31469.1|  790|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U64844-11|AAB18311.1|  482|Caenorhabditis elegans Hypothetical p...    27   8.6  

>AL032643-4|CAA21662.1|  436|Caenorhabditis elegans Hypothetical
           protein Y54E5A.6 protein.
          Length = 436

 Score =  185 bits (450), Expect = 3e-47
 Identities = 90/179 (50%), Positives = 120/179 (67%)
 Frame = +2

Query: 110 YENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVDQT 289
           Y NK ILAPMVR G  P+RLL LKYGAD+ YTEE++D K + + R  N+ L T+DY +  
Sbjct: 5   YRNKKILAPMVRAGRTPLRLLCLKYGADLCYTEEIVDKKLIEATRVVNEALGTIDYRNGD 64

Query: 290 DGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKGGMGV 469
           D  I+ R   EEK + +LQ+GT    +A K+A++V  DVA ID+NMGCPK FSI  GMG 
Sbjct: 65  D--IILRLAPEEKGRCILQIGTNSGEKAAKIAQIVGDDVAGIDVNMGCPKPFSIHCGMGA 122

Query: 470 ALLSKPDKAYQILKTLVDNLSIPVTCKIRILKTPEATLELVNKLVSSGIKAIAVHGRTK 646
           ALL++ +K   IL +L     +PVTCKIR+L  PE TL+LV ++    + A+ VHGR +
Sbjct: 123 ALLTQTEKIVDILTSLKSAAKVPVTCKIRVLDDPEDTLKLVQEIEKCRVSALGVHGRRR 181


>Z81077-3|CAB03067.1|  527|Caenorhabditis elegans Hypothetical
           protein F36A2.2 protein.
          Length = 527

 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 50/174 (28%), Positives = 82/174 (47%)
 Frame = +2

Query: 125 ILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVDQTDGTIV 304
           +LAPMV    L  R+   KYGA + +T  +    F+       + L  V    + D  +V
Sbjct: 76  VLAPMVDQSELAFRMFTRKYGAQLTFTPMIHAHLFVNDGTYRRNSLALV----KADRPLV 131

Query: 305 FRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKGGMGVALLSK 484
            + C     KV   L  C         +LVE     +D+N+GCP+  + +G  G  L  +
Sbjct: 132 VQFC---ANKVDTFLAAC---------RLVEDVCDGVDLNLGCPQMVAKRGRYGSWLQDE 179

Query: 485 PDKAYQILKTLVDNLSIPVTCKIRILKTPEATLELVNKLVSSGIKAIAVHGRTK 646
            D   +++  + D   +P++CKIR+    + T+E   +LV +G   + VHGRT+
Sbjct: 180 VDLICEMVSAVRDYCRLPISCKIRVRDDRQQTVEYAKRLVDAGATMLTVHGRTR 233


>U21323-13|AAA62547.2|  284|Caenorhabditis elegans Hypothetical
           protein C45G9.2 protein.
          Length = 284

 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 50/172 (29%), Positives = 77/172 (44%), Gaps = 3/172 (1%)
 Frame = +2

Query: 137 MVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVDQTDGTIVFRTC 316
           MVR   L  R L   Y  D+ +T  +    F+ S++  +  L+                C
Sbjct: 1   MVRYSKLAFRQLVRVYDVDVCFTPMIYAKNFIESEKCRSSELSV---------------C 45

Query: 317 EEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSIKGGMGVALLSKPDKA 496
           E +   +V Q  T D     + A++V      +D+N GCPK      G G ALLSKP+  
Sbjct: 46  EGDSPLIV-QFATDDPFVLSEAAEMVYKCSTGVDLNCGCPKHDVRSKGFGSALLSKPELL 104

Query: 497 YQILKTLVDNLSIP---VTCKIRILKTPEATLELVNKLVSSGIKAIAVHGRT 643
             +++     +  P   V+ KIRI    E T++L  K  ++G+  + VHGRT
Sbjct: 105 ADMVRQTRARIPDPDFSVSLKIRINHDIEKTVDLCRKAEAAGVTHLTVHGRT 156


>AF125451-6|AAD12825.1|  554|Caenorhabditis elegans Hypothetical
           protein Y37E11B.5 protein.
          Length = 554

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 53/169 (31%), Positives = 72/169 (42%), Gaps = 9/169 (5%)
 Frame = +2

Query: 95  PINM-NYENKIILAPMVRIGTLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTV 271
           P+NM + + K  LAP+  +G LP R + + YGADI   E  +    L        +L   
Sbjct: 196 PLNMGSLDGKKYLAPLTTVGNLPFRRICVDYGADITCGEMALATSILSGTASEYSLLKR- 254

Query: 272 DYVDQTDGTIVFRTCEEEKKKVVLQLGTCDEARALKVAKLVEHDVAAIDINMGCPKEFSI 451
                         CE+    V L  G  D         +   DV  IDINMGCP +   
Sbjct: 255 ------------HPCEKIFG-VQLAGGFADTMAKASQIVVENFDVDFIDINMGCPIDVVN 301

Query: 452 KGGMGVALLSKPDKAYQILKTLVDNLS--IPVTCKIR------ILKTPE 574
           + G G AL S+P K +++L      L    P+T KIR      +LK PE
Sbjct: 302 QKGGGCALPSRPQKLFEVLAATKSVLGGCCPLTVKIRTGMKEGVLKAPE 350


>Z99278-1|CAB16490.1|  793|Caenorhabditis elegans Hypothetical
           protein Y53C12B.1 protein.
          Length = 793

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +2

Query: 152 TLPMRLLALKYGADIVYTEELIDWKFLRSKRRFNDILNTVDYVDQTDGTIVFRTCEEE 325
           T P++ +A K   + VYT   + W     ++ F+   N V  +D  D T  +   + E
Sbjct: 2   TEPIKEIAAKRSVEAVYTGGTVRWS-ANGQKLFSTCTNVVKVIDLADNTASYTIGDPE 58


>Z92831-2|CAB07368.2|  861|Caenorhabditis elegans Hypothetical
           protein F22G12.4 protein.
          Length = 861

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +2

Query: 401 DVAAIDINMGCPKEFSIKGGMGVALLSKPDKAYQILKTLVDNL 529
           DVA++ +N GC  E  +  G G  +L   D+++   +TL+  L
Sbjct: 367 DVASLLVNFGCDVESRVALGAGGEVLDDGDESWITKQTLLHRL 409


>U23450-6|AAK31469.1|  790|Caenorhabditis elegans Hypothetical
           protein C30B5.5 protein.
          Length = 790

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -1

Query: 400 MFH*FGNL*SSGFITRPEL*NHFFLFFFTSAEYNSSICLIN-IIYCVKYVVK 248
           +F  FGN  ++  +TRP + N   LF    A ++S + +    IY ++Y+++
Sbjct: 45  LFGLFGNATTALILTRPSMRNPNNLFLTALAVFDSCLLITAFFIYAMEYIIE 96


>U64844-11|AAB18311.1|  482|Caenorhabditis elegans Hypothetical
           protein T22F3.8 protein.
          Length = 482

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +2

Query: 146 IGTLPMRLLALKYGA 190
           IGT+PM LL +KYGA
Sbjct: 107 IGTVPMNLLLVKYGA 121


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,987,206
Number of Sequences: 27780
Number of extensions: 312279
Number of successful extensions: 715
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)