Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11d01
         (731 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           23   3.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.8  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   6.8  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   9.0  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   9.0  

>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 362 VEKLELFVVSCGY 324
           VEKL  ++VSCGY
Sbjct: 114 VEKLGDYLVSCGY 126


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
 Frame = +2

Query: 272 KEGSTVLLDLINNALSLDNHKKLRITPIFLHLCENYETIKNVIEQCQKYNYDLYSPHISE 451
           K+G  + +   N A+ +  ++ L I PIFL+        +  +E+ +    + Y  +   
Sbjct: 125 KDGVQIFIAPNNGAVKVLANEFLSILPIFLYALGEQPLTEQNLEELRDLK-ETYPFNPVL 183

Query: 452 YVQSKSHIPIVNSLPIVNNELIE-EYNNMQNSM 547
           ++ S  +I    SL  ++ EL E E + +QN +
Sbjct: 184 FISSLENI----SLNGIDPELTESEQHRLQNRL 212


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
 Frame = +2

Query: 272 KEGSTVLLDLINNALSLDNHKKLRITPIFLHLCENYETIKNVIEQCQKYNYDLYSPHISE 451
           K+G  + +   N A+ +  ++ L I PIFL+        +  +E+ +    + Y  +   
Sbjct: 163 KDGVQIFIAPNNGAVKVLANEFLSILPIFLYALGEQPLTEQNLEELRDLK-ETYPFNPVL 221

Query: 452 YVQSKSHIPIVNSLPIVNNELIE-EYNNMQNSM 547
           ++ S  +I    SL  ++ EL E E + +QN +
Sbjct: 222 FISSLENI----SLNGIDPELTESEQHRLQNRL 250


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 263 NRSKHYLPFLIFYF 222
           N+ +HY   L+FYF
Sbjct: 3   NQKEHYRHILLFYF 16


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 503 NNELIEEYNNMQNSMLPTVKDDFITNIKR 589
           NN     YNN  N+    +  ++I NI++
Sbjct: 98  NNNYNNNYNNNYNNNYKKLYKNYIINIEQ 126


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 503 NNELIEEYNNMQNSMLPTVKDDFITNIKR 589
           NN     YNN  N+    +  ++I NI++
Sbjct: 98  NNNYNNNYNNNYNNNYKKLYKNYIINIEQ 126


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,476
Number of Sequences: 438
Number of extensions: 4430
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)