Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c24
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    27   0.12 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   6.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   6.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.0  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 696  FKTKYFFLTFIGFHLSYKSMFTIHTDTYSFINIKN 592
            +K K F    +  ++ Y ++FTI T T SF+ I N
Sbjct: 1203 YKKKKFQRMVVARYVYYATIFTIITATSSFVTIHN 1237


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = +1

Query: 484  VPLMFFILNHIVCSQNMTIYISK 552
            +P++FF+L    C  N+ + +++
Sbjct: 952  IPILFFMLVCFTCKSNIQLIVAQ 974


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = +1

Query: 484  VPLMFFILNHIVCSQNMTIYISK 552
            +P++FF+L    C  N+ + +++
Sbjct: 952  IPILFFMLVCFTCKSNIQLIVAQ 974


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = +1

Query: 484  VPLMFFILNHIVCSQNMTIYISK 552
            +P++FF+L    C  N+ + +++
Sbjct: 952  IPILFFMLVCFTCKSNIQLIVAQ 974


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = +1

Query: 484  VPLMFFILNHIVCSQNMTIYISK 552
            +P++FF+L    C  N+ + +++
Sbjct: 952  IPILFFMLVCFTCKSNIQLIVAQ 974


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 738 LYIVXAYFFLDISIFKTKYFFLTFIGFHLSYKSMFTIH 625
           ++ V   F L I  F    FFL  I +      +FT+H
Sbjct: 122 IFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVH 159



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = -3

Query: 717 FFLDISIFKTKYFFLTFIGFHLSYKSMFTIHTDTYSFINIKNNNFYY 577
           F L +  F     FL  I +  S   +FTIH   Y  + I    +Y+
Sbjct: 195 FLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYF 241


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/13 (69%), Positives = 11/13 (84%), Gaps = 1/13 (7%)
 Frame = -3

Query: 171 CY-IYVFSVYSIY 136
           CY IY+F+VY IY
Sbjct: 148 CYFIYLFTVYYIY 160


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
 Frame = -3

Query: 699 IFKTK---YFFLTFIGFHLSY 646
           I KTK   Y++  F G HL+Y
Sbjct: 107 IKKTKRYCYYYYAFFGVHLAY 127


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 171 SSYDGCSFKNYIYYIKFGQK 230
           S  + CS K+Y+  IK  QK
Sbjct: 459 SGDEACSLKDYVSRIKPNQK 478


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,403
Number of Sequences: 336
Number of extensions: 4149
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)