Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c24
         (749 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93397-6|CAB07718.2|  550|Caenorhabditis elegans Hypothetical pr...    31   0.87 
Z70685-1|CAA94607.1|  522|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z19122-1|CAA79529.1|  522|Caenorhabditis elegans hypothetical po...    31   1.2  
AF039042-12|AAC48249.1|  352|Caenorhabditis elegans Hypothetical...    28   8.1  

>Z93397-6|CAB07718.2|  550|Caenorhabditis elegans Hypothetical
           protein ZC482.4 protein.
          Length = 550

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +3

Query: 399 LKTNYCLAV*SECLCENAKGIKKCVRIKCTFNVLYFEPHCM--FSKYDYIY 545
           LK  +C+++ S C+ + A  ++K +   C FN        +  F K D +Y
Sbjct: 8   LKYLFCMSILSNCMADRANDVQKALNETCVFNETEINSKTIKKFPKCDRVY 58


>Z70685-1|CAA94607.1|  522|Caenorhabditis elegans Hypothetical
           protein R07D5.1 protein.
          Length = 522

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +1

Query: 457 GLKNAYALNVPLMFFILNHIVCSQNM 534
           G+K  Y+ NV L FF+LNH++ S ++
Sbjct: 324 GIKVLYSANVLLQFFLLNHLLGSNDL 349


>Z19122-1|CAA79529.1|  522|Caenorhabditis elegans hypothetical
           polypeptide protein.
          Length = 522

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +1

Query: 457 GLKNAYALNVPLMFFILNHIVCSQNM 534
           G+K  Y+ NV L FF+LNH++ S ++
Sbjct: 324 GIKVLYSANVLLQFFLLNHLLGSNDL 349


>AF039042-12|AAC48249.1|  352|Caenorhabditis elegans Hypothetical
           protein ZK697.1 protein.
          Length = 352

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 215 YIIYIIFKRATIIRTVTYTFSVCTVYTVNVKL 120
           Y + +I+  A+II T+ Y F +C   ++ V L
Sbjct: 283 YSVQVIYILASIIETILYKFDICQPISLIVSL 314


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,196,809
Number of Sequences: 27780
Number of extensions: 348632
Number of successful extensions: 784
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)