Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11c23
(675 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK131534-1|BAD18671.1| 766|Homo sapiens protein ( Homo sapiens ... 31 2.8
BC150290-1|AAI50291.1| 2432|Homo sapiens NAV2 protein protein. 31 4.9
AJ488102-1|CAD32471.1| 2488|Homo sapiens steerin2 protein protein. 31 4.9
AF466144-1|AAL96480.1| 2432|Homo sapiens retinoic acid inducible... 31 4.9
AB037840-1|BAA92657.3| 2464|Homo sapiens KIAA1419 protein protein. 31 4.9
AF041206-1|AAC32998.1| 484|Homo sapiens midline 1 cerebellar is... 30 6.5
Y13667-1|CAA74018.1| 667|Homo sapiens putative transcription fa... 30 8.6
BC053626-1|AAH53626.1| 667|Homo sapiens midline 1 (Opitz/BBB sy... 30 8.6
AF269101-1|AAG33130.1| 667|Homo sapiens midline 1 protein. 30 8.6
AF230977-1|AAG50192.1| 552|Homo sapiens tripartite motif protei... 30 8.6
AF230976-1|AAG50191.1| 667|Homo sapiens tripartite motif protei... 30 8.6
AF041210-1|AAC33002.1| 630|Homo sapiens midline 1 fetal kidney ... 30 8.6
AF041209-1|AAC33001.1| 667|Homo sapiens midline 1 fetal kidney ... 30 8.6
AF041208-1|AAC33000.1| 667|Homo sapiens midline 1 fetal kidney ... 30 8.6
AF035360-1|AAB99951.1| 667|Homo sapiens ring finger protein pro... 30 8.6
>AK131534-1|BAD18671.1| 766|Homo sapiens protein ( Homo sapiens
cDNA FLJ16763 fis, clone BRAMY3018357, weakly similar
to SNF1-related protein kinase KIN10 (EC 2.7.1.-). ).
Length = 766
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 310 LNETINSLDLAFGRLKKCRLSNGVGRASTPGSPTIRHRNDILMNSSRA 453
L++T N +++ GRL KC NG A P +P R + L +S+ A
Sbjct: 691 LSDTTNCMEMMTGRLSKCDEKNGQA-AQAPSTPAKRSAHGPLGDSAAA 737
>BC150290-1|AAI50291.1| 2432|Homo sapiens NAV2 protein protein.
Length = 2432
Score = 30.7 bits (66), Expect = 4.9
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Frame = +1
Query: 187 EIDMENQTLNNEKRFINKARSHNTGPSQFVRNEPVKRKSVLLNETINSLDLAFGRLKKCR 366
++ + Q ++ IN A SH++ S + K++ +NE +S AFG+ K +
Sbjct: 1735 DLRIRRQHSSDSVSSINSATSHSSVGSNIESDSKKKKRKNWVNELRSSFKQAFGKKKSPK 1794
Query: 367 LSNG------VGRASTPGSPTIRHRND-----ILMNSSRASTFSHGLDN 480
++ + +S P SP + H +L NS S S +D+
Sbjct: 1795 SASSHSDIEEMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMDS 1843
>AJ488102-1|CAD32471.1| 2488|Homo sapiens steerin2 protein protein.
Length = 2488
Score = 30.7 bits (66), Expect = 4.9
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Frame = +1
Query: 187 EIDMENQTLNNEKRFINKARSHNTGPSQFVRNEPVKRKSVLLNETINSLDLAFGRLKKCR 366
++ + Q ++ IN A SH++ S + K++ +NE +S AFG+ K +
Sbjct: 1791 DLRIRRQHSSDSVSSINSATSHSSVGSNIESDSKKKKRKNWVNELRSSFKQAFGKKKSPK 1850
Query: 367 LSNG------VGRASTPGSPTIRHRND-----ILMNSSRASTFSHGLDN 480
++ + +S P SP + H +L NS S S +D+
Sbjct: 1851 SASSHSDIEEMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMDS 1899
>AF466144-1|AAL96480.1| 2432|Homo sapiens retinoic acid inducible in
neuroblastoma cells RAINB1d protein.
Length = 2432
Score = 30.7 bits (66), Expect = 4.9
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Frame = +1
Query: 187 EIDMENQTLNNEKRFINKARSHNTGPSQFVRNEPVKRKSVLLNETINSLDLAFGRLKKCR 366
++ + Q ++ IN A SH++ S + K++ +NE +S AFG+ K +
Sbjct: 1735 DLRIRRQHSSDSVSSINSATSHSSVGSNIESDSKKKKRKNWVNELRSSFKQAFGKKKSPK 1794
Query: 367 LSNG------VGRASTPGSPTIRHRND-----ILMNSSRASTFSHGLDN 480
++ + +S P SP + H +L NS S S +D+
Sbjct: 1795 SASSHSDIEEMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMDS 1843
>AB037840-1|BAA92657.3| 2464|Homo sapiens KIAA1419 protein protein.
Length = 2464
Score = 30.7 bits (66), Expect = 4.9
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Frame = +1
Query: 187 EIDMENQTLNNEKRFINKARSHNTGPSQFVRNEPVKRKSVLLNETINSLDLAFGRLKKCR 366
++ + Q ++ IN A SH++ S + K++ +NE +S AFG+ K +
Sbjct: 1767 DLRIRRQHSSDSVSSINSATSHSSVGSNIESDSKKKKRKNWVNELRSSFKQAFGKKKSPK 1826
Query: 367 LSNG------VGRASTPGSPTIRHRND-----ILMNSSRASTFSHGLDN 480
++ + +S P SP + H +L NS S S +D+
Sbjct: 1827 SASSHSDIEEMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMDS 1875
>AF041206-1|AAC32998.1| 484|Homo sapiens midline 1 cerebellar
isoform 1 protein.
Length = 484
Score = 30.3 bits (65), Expect = 6.5
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 214 NNEKRFINKARSHNTGPSQFVRNEPVKRKSVLLNETINSLDLAFGRLKKCRLSNGVGRAS 393
N+ RF+ A++ S + V + LN+T ++ L F R KK L + +
Sbjct: 323 NDHARFLQTAKNITERVSMATASSQVXIPEINLNDTFDTFALDFSREKK--LLECLDYLT 380
Query: 394 TPGSPTIR 417
P PTIR
Sbjct: 381 APNPPTIR 388
>Y13667-1|CAA74018.1| 667|Homo sapiens putative transcription
factor XPRF protein.
Length = 667
Score = 29.9 bits (64), Expect = 8.6
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 214 NNEKRFINKARSHNTGPSQFVRNEPVKRKSVLLNETINSLDLAFGRLKKCRLSNGVGRAS 393
N+ RF+ A++ S + V + LN+T ++ L F R KK L + +
Sbjct: 323 NDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFDTFALDFSREKK--LLECLDYLT 380
Query: 394 TPGSPTIR 417
P PTIR
Sbjct: 381 APNPPTIR 388
>BC053626-1|AAH53626.1| 667|Homo sapiens midline 1 (Opitz/BBB
syndrome) protein.
Length = 667
Score = 29.9 bits (64), Expect = 8.6
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 214 NNEKRFINKARSHNTGPSQFVRNEPVKRKSVLLNETINSLDLAFGRLKKCRLSNGVGRAS 393
N+ RF+ A++ S + V + LN+T ++ L F R KK L + +
Sbjct: 323 NDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFDTFALDFSREKK--LLECLDYLT 380
Query: 394 TPGSPTIR 417
P PTIR
Sbjct: 381 APNPPTIR 388
>AF269101-1|AAG33130.1| 667|Homo sapiens midline 1 protein.
Length = 667
Score = 29.9 bits (64), Expect = 8.6
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 214 NNEKRFINKARSHNTGPSQFVRNEPVKRKSVLLNETINSLDLAFGRLKKCRLSNGVGRAS 393
N+ RF+ A++ S + V + LN+T ++ L F R KK L + +
Sbjct: 323 NDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFDTFALDFSREKK--LLECLDYLT 380
Query: 394 TPGSPTIR 417
P PTIR
Sbjct: 381 APNPPTIR 388
>AF230977-1|AAG50192.1| 552|Homo sapiens tripartite motif protein
TRIM18 beta protein.
Length = 552
Score = 29.9 bits (64), Expect = 8.6
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 214 NNEKRFINKARSHNTGPSQFVRNEPVKRKSVLLNETINSLDLAFGRLKKCRLSNGVGRAS 393
N+ RF+ A++ S + V + LN+T ++ L F R KK L + +
Sbjct: 323 NDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFDTFALDFSREKK--LLECLDYLT 380
Query: 394 TPGSPTIR 417
P PTIR
Sbjct: 381 APNPPTIR 388
>AF230976-1|AAG50191.1| 667|Homo sapiens tripartite motif protein
TRIM18 alpha protein.
Length = 667
Score = 29.9 bits (64), Expect = 8.6
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 214 NNEKRFINKARSHNTGPSQFVRNEPVKRKSVLLNETINSLDLAFGRLKKCRLSNGVGRAS 393
N+ RF+ A++ S + V + LN+T ++ L F R KK L + +
Sbjct: 323 NDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFDTFALDFSREKK--LLECLDYLT 380
Query: 394 TPGSPTIR 417
P PTIR
Sbjct: 381 APNPPTIR 388
>AF041210-1|AAC33002.1| 630|Homo sapiens midline 1 fetal kidney
isoform 3 protein.
Length = 630
Score = 29.9 bits (64), Expect = 8.6
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 214 NNEKRFINKARSHNTGPSQFVRNEPVKRKSVLLNETINSLDLAFGRLKKCRLSNGVGRAS 393
N+ RF+ A++ S + V + LN+T ++ L F R KK L + +
Sbjct: 286 NDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFDTFALDFSREKK--LLECLDYLT 343
Query: 394 TPGSPTIR 417
P PTIR
Sbjct: 344 APNPPTIR 351
>AF041209-1|AAC33001.1| 667|Homo sapiens midline 1 fetal kidney
isoform 2 protein.
Length = 667
Score = 29.9 bits (64), Expect = 8.6
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 214 NNEKRFINKARSHNTGPSQFVRNEPVKRKSVLLNETINSLDLAFGRLKKCRLSNGVGRAS 393
N+ RF+ A++ S + V + LN+T ++ L F R KK L + +
Sbjct: 323 NDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFDTFALDFSREKK--LLECLDYLT 380
Query: 394 TPGSPTIR 417
P PTIR
Sbjct: 381 APNPPTIR 388
>AF041208-1|AAC33000.1| 667|Homo sapiens midline 1 fetal kidney
isoform 1 protein.
Length = 667
Score = 29.9 bits (64), Expect = 8.6
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 214 NNEKRFINKARSHNTGPSQFVRNEPVKRKSVLLNETINSLDLAFGRLKKCRLSNGVGRAS 393
N+ RF+ A++ S + V + LN+T ++ L F R KK L + +
Sbjct: 323 NDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFDTFALDFSREKK--LLECLDYLT 380
Query: 394 TPGSPTIR 417
P PTIR
Sbjct: 381 APNPPTIR 388
>AF035360-1|AAB99951.1| 667|Homo sapiens ring finger protein
protein.
Length = 667
Score = 29.9 bits (64), Expect = 8.6
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 214 NNEKRFINKARSHNTGPSQFVRNEPVKRKSVLLNETINSLDLAFGRLKKCRLSNGVGRAS 393
N+ RF+ A++ S + V + LN+T ++ L F R KK L + +
Sbjct: 323 NDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFDTFALDFSREKK--LLECLDYLT 380
Query: 394 TPGSPTIR 417
P PTIR
Sbjct: 381 APNPPTIR 388
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,168,492
Number of Sequences: 237096
Number of extensions: 1805290
Number of successful extensions: 3760
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3760
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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