Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c22
         (554 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U30826-1|AAA93070.1|  272|Homo sapiens SRp40-1 protein.                31   2.1  
L14076-1|AAA36649.1|  494|Homo sapiens pre-mRNA splicing factor ...    31   2.1  
BT007089-1|AAP35752.1|  272|Homo sapiens splicing factor, argini...    31   2.1  
BC040209-1|AAH40209.1|  272|Homo sapiens splicing factor, argini...    31   2.1  
BC018823-1|AAH18823.1|  272|Homo sapiens splicing factor, argini...    31   2.1  
AK223444-1|BAD97164.1|  382|Homo sapiens splicing factor, argini...    31   2.1  
AB209856-1|BAD93093.1|  419|Homo sapiens splicing factor, argini...    31   2.1  
AB209804-1|BAD93041.1|  326|Homo sapiens CS0DF038YO05 variant pr...    31   2.1  
BC056886-1|AAH56886.1|  392|Homo sapiens LUC7-like 2 (S. cerevis...    31   3.6  
BC050708-1|AAH50708.1|  392|Homo sapiens LUC7-like 2 (S. cerevis...    31   3.6  
BC042625-1|AAH42625.1|  391|Homo sapiens LUC7L2 protein protein.       31   3.6  
BC017163-1|AAH17163.1|  392|Homo sapiens LUC7-like 2 (S. cerevis...    31   3.6  
AK022895-1|BAB14297.1|  392|Homo sapiens protein ( Homo sapiens ...    31   3.6  
AK001519-1|BAA91737.1|  392|Homo sapiens protein ( Homo sapiens ...    31   3.6  
AK001476-1|BAA91713.1|  392|Homo sapiens protein ( Homo sapiens ...    31   3.6  
AF151832-1|AAD34069.1|  402|Homo sapiens CGI-74 protein protein.       31   3.6  
AF151817-1|AAD34054.1|  383|Homo sapiens CGI-59 protein protein.       31   3.6  
BT007415-1|AAP36083.1|  494|Homo sapiens splicing factor, argini...    30   6.3  
BC002781-1|AAH02781.1|  494|Homo sapiens splicing factor, argini...    30   6.3  
AL590729-1|CAI14326.1|  494|Homo sapiens splicing factor, argini...    30   6.3  
AL357500-1|CAH71635.1|  494|Homo sapiens splicing factor, argini...    30   6.3  
Z69881-1|CAA93737.1|  999|Homo sapiens adenosine triphosphatase,...    29   8.3  

>U30826-1|AAA93070.1|  272|Homo sapiens SRp40-1 protein.
          Length = 272

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWRPHKK 456
           +R +S+    S+ RSR   R R RK+Y +  S SR R   K
Sbjct: 186 SRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSK 226


>L14076-1|AAA36649.1|  494|Homo sapiens pre-mRNA splicing factor
           protein.
          Length = 494

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESR 438
           +R +SKD R S KRSR+  R R R   K   S  R
Sbjct: 346 SRSKSKDKRKSRKRSREESRSRSRSRSKSERSRKR 380


>BT007089-1|AAP35752.1|  272|Homo sapiens splicing factor,
           arginine/serine-rich 5 protein.
          Length = 272

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWRPHKK 456
           +R +S+    S+ RSR   R R RK+Y +  S SR R   K
Sbjct: 186 SRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSK 226


>BC040209-1|AAH40209.1|  272|Homo sapiens splicing factor,
           arginine/serine-rich 5 protein.
          Length = 272

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWRPHKK 456
           +R +S+    S+ RSR   R R RK+Y +  S SR R   K
Sbjct: 186 SRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSK 226


>BC018823-1|AAH18823.1|  272|Homo sapiens splicing factor,
           arginine/serine-rich 5 protein.
          Length = 272

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWRPHKK 456
           +R +S+    S+ RSR   R R RK+Y +  S SR R   K
Sbjct: 186 SRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSK 226


>AK223444-1|BAD97164.1|  382|Homo sapiens splicing factor,
           arginine/serine-rich 4 variant protein.
          Length = 382

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESR 438
           +R +SKD R S KRSR+  R R R   K   S  R
Sbjct: 346 SRSKSKDKRKSRKRSREESRSRSRSRSKSERSRKR 380


>AB209856-1|BAD93093.1|  419|Homo sapiens splicing factor,
           arginine/serine-rich 4 variant protein.
          Length = 419

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESR 438
           +R +SKD R S KRSR+  R R R   K   S  R
Sbjct: 271 SRSKSKDKRKSRKRSREESRSRSRSRSKSERSRKR 305


>AB209804-1|BAD93041.1|  326|Homo sapiens CS0DF038YO05 variant
           protein.
          Length = 326

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWRPHKK 456
           +R +S+    S+ RSR   R R RK+Y +  S SR R   K
Sbjct: 240 SRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSK 280


>BC056886-1|AAH56886.1|  392|Homo sapiens LUC7-like 2 (S.
           cerevisiae) protein.
          Length = 392

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 444
           +R  S+    S++RSR + R R R+  K+RSS+ R+R
Sbjct: 305 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 341


>BC050708-1|AAH50708.1|  392|Homo sapiens LUC7-like 2 (S.
           cerevisiae) protein.
          Length = 392

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 444
           +R  S+    S++RSR + R R R+  K+RSS+ R+R
Sbjct: 305 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 341


>BC042625-1|AAH42625.1|  391|Homo sapiens LUC7L2 protein protein.
          Length = 391

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 444
           +R  S+    S++RSR + R R R+  K+RSS+ R+R
Sbjct: 304 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 340


>BC017163-1|AAH17163.1|  392|Homo sapiens LUC7-like 2 (S.
           cerevisiae) protein.
          Length = 392

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 444
           +R  S+    S++RSR + R R R+  K+RSS+ R+R
Sbjct: 305 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 341


>AK022895-1|BAB14297.1|  392|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12833 fis, clone NT2RP2003157, weakly similar to
           SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
          Length = 392

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 444
           +R  S+    S++RSR + R R R+  K+RSS+ R+R
Sbjct: 305 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 341


>AK001519-1|BAA91737.1|  392|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10657 fis, clone NT2RP2006043, weakly similar to
           SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
          Length = 392

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 444
           +R  S+    S++RSR + R R R+  K+RSS+ R+R
Sbjct: 305 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 341


>AK001476-1|BAA91713.1|  392|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10614 fis, clone NT2RP2005436, weakly similar to
           SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
          Length = 392

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 444
           +R  S+    S++RSR + R R R+  K+RSS+ R+R
Sbjct: 305 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 341


>AF151832-1|AAD34069.1|  402|Homo sapiens CGI-74 protein protein.
          Length = 402

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 444
           +R  S+    S++RSR + R R R+  K+RSS+ R+R
Sbjct: 305 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 341


>AF151817-1|AAD34054.1|  383|Homo sapiens CGI-59 protein protein.
          Length = 383

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESRWR 444
           +R  S+    S++RSR + R R R+  K+RSS+ R+R
Sbjct: 296 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 332


>BT007415-1|AAP36083.1|  494|Homo sapiens splicing factor,
           arginine/serine-rich 4 protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESR 438
           +R +SKD R   KRSR+  R R R   K   S  R
Sbjct: 346 SRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKR 380


>BC002781-1|AAH02781.1|  494|Homo sapiens splicing factor,
           arginine/serine-rich 4 protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESR 438
           +R +SKD R   KRSR+  R R R   K   S  R
Sbjct: 346 SRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKR 380


>AL590729-1|CAI14326.1|  494|Homo sapiens splicing factor,
           arginine/serine-rich 4 protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESR 438
           +R +SKD R   KRSR+  R R R   K   S  R
Sbjct: 346 SRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKR 380


>AL357500-1|CAH71635.1|  494|Homo sapiens splicing factor,
           arginine/serine-rich 4 protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 334 ARIQSKDSRLSNKRSRKTHRKRIRKAYKQRSSESR 438
           +R +SKD R   KRSR+  R R R   K   S  R
Sbjct: 346 SRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKR 380


>Z69881-1|CAA93737.1|  999|Homo sapiens adenosine triphosphatase,
           calcium protein.
          Length = 999

 Score = 29.5 bits (63), Expect = 8.3
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +2

Query: 248 SAIKSVSNARANVPAPWTQLVAWGLLATAPEFSPKTRDLVTNVP 379
           +AI  +  A   V   W  LV  GL ATA  F+P   D++  +P
Sbjct: 778 TAILGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIIEKLP 821


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,452,562
Number of Sequences: 237096
Number of extensions: 1571580
Number of successful extensions: 3698
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3687
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)