Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c20
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...   350   6e-99
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    29   0.049
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    29   0.049
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.60 
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.79 
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.79 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.79 
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.79 
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.79 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.7  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score =  350 bits (861), Expect = 6e-99
 Identities = 173/194 (89%), Positives = 183/194 (94%)
 Frame = +3

Query: 120 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLT 299
           MPEE   Q  +VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLT
Sbjct: 1   MPEE--NQNGDVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLT 58

Query: 300 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAG 479
           +PS+LDSGKELYIKIIPNKN+GTLTIIDTGIGMTKADLV+NLGTIAKSGTKAFMEALQAG
Sbjct: 59  NPSRLDSGKELYIKIIPNKNDGTLTIIDTGIGMTKADLVHNLGTIAKSGTKAFMEALQAG 118

Query: 480 ADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPDSGEPLGRGTK 659
           ADISMIGQFGVGFYS+YLVAD+VTV SK+NDDEQYVWESSAGGSFTV  D GEPLGRGTK
Sbjct: 119 ADISMIGQFGVGFYSAYLVADKVTVVSKNNDDEQYVWESSAGGSFTVTQDRGEPLGRGTK 178

Query: 660 IVLHVKEDLAEFME 701
           IVLH+KED  EF+E
Sbjct: 179 IVLHMKEDQTEFLE 192


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 28.7 bits (61), Expect = 0.049
 Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = -2

Query: 158 FNLRWLCLHFFRHFLY-CFLFNSH-KMTRGFLTHVFQSAKYRTLVSVLLSV 12
           F  R+LCL F+ +F Y  +++ ++ +   G   ++ Q A Y   +++L S+
Sbjct: 75  FMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGFLAMLTSM 125


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 0.049
 Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = -2

Query: 158 FNLRWLCLHFFRHFLY-CFLFNSH-KMTRGFLTHVFQSAKYRTLVSVLLSV 12
           F  R+LCL F+ +F Y  +++ ++ +   G   ++ Q A Y   +++L S+
Sbjct: 31  FMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGFLAMLTSM 81


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = -2

Query: 701 FHEFCQVLFDVKDDLCTSTKGLTAVWADCERASCRR 594
           +H     L + K   C    G    W +C++A+C +
Sbjct: 861 YHPSIVSLGEYKCVTCKCENGKPTCWRECDKATCEK 896


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 612 FTVRPDSGEPLGRGTKIVL 668
           FT+ PDSGE L  G  I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 612 FTVRPDSGEPLGRGTKIVL 668
           FT+ PDSGE L  G  I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 612 FTVRPDSGEPLGRGTKIVL 668
           FT+ PDSGE L  G  I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 612 FTVRPDSGEPLGRGTKIVL 668
           FT+ PDSGE L  G  I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 612 FTVRPDSGEPLGRGTKIVL 668
           FT+ PDSGE L  G  I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 420 CSPNRPWSYQYRYR 379
           C P RPW   Y +R
Sbjct: 522 CDPYRPWQTVYNHR 535


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +1

Query: 274 TKSGMNLSRIRQNSIVAKSCTSRSFPTRTRALL 372
           ++SG+N      N++ A +   + +PT T  +L
Sbjct: 368 SQSGINYKDTNDNNVSAVTTQHQGYPTNTVTIL 400


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 485 HQHDWTVRCWLLLQ 526
           HQH W    WLL Q
Sbjct: 215 HQHAWIWLVWLLSQ 228


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 485 HQHDWTVRCWLLLQ 526
           HQH W    WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 485 HQHDWTVRCWLLLQ 526
           HQH W    WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 485 HQHDWTVRCWLLLQ 526
           HQH W    WLL Q
Sbjct: 448 HQHAWIWLVWLLSQ 461


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 485 HQHDWTVRCWLLLQ 526
           HQH W    WLL Q
Sbjct: 448 HQHAWIWLVWLLSQ 461


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 485 HQHDWTVRCWLLLQ 526
           HQH W    WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 485 HQHDWTVRCWLLLQ 526
           HQH W    WLL Q
Sbjct: 461 HQHAWIWLLWLLSQ 474


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = -1

Query: 420 CSPNRPWSYQYRYR 379
           C P  PW   Y YR
Sbjct: 481 CDPYTPWHTFYDYR 494


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,999
Number of Sequences: 336
Number of extensions: 3746
Number of successful extensions: 24
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)