Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11c19
(755 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125952-4|AAD14698.1| 330|Caenorhabditis elegans Hypothetical ... 42 6e-04
AC006722-10|ABP57811.1| 330|Caenorhabditis elegans Hypothetical... 42 6e-04
Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical p... 33 0.29
AL117193-13|CAB55004.2| 478|Caenorhabditis elegans Hypothetical... 32 0.51
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 31 1.2
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 29 2.7
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 29 3.6
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 29 3.6
Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z46934-7|CAA87047.1| 472|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical pr... 28 8.2
>AF125952-4|AAD14698.1| 330|Caenorhabditis elegans Hypothetical
protein C01B4.6 protein.
Length = 330
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 1/131 (0%)
Frame = +1
Query: 361 KNRMSVQIISYGATITSIQXXXXXXXXXXXXAGFDTLEEYFQPRNPYFGATIGRYANIIR 540
K ++ ++ +GAT+ + GFDT++E F+ G T+GR AN I+
Sbjct: 11 KQGLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDE-FEKDAASIGKTVGRVANRIK 69
Query: 541 DATMVVRPSGRMYMLSNNKXXXXXXXXXXXFDKVNWHSYVNGNQVIMSHV-SERFHEGYP 717
++T+ G+ Y ++ N W + + + V + +G P
Sbjct: 70 NSTL--HFDGKQYTMTPNNGPHYLHGGPNGLGYRKWEVVRHAPESVSFSVRANEQDDGLP 127
Query: 718 GTVMAQITFEV 750
G +T+ V
Sbjct: 128 GDAKIDVTYTV 138
>AC006722-10|ABP57811.1| 330|Caenorhabditis elegans Hypothetical
protein Y19D10A.16 protein.
Length = 330
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 1/131 (0%)
Frame = +1
Query: 361 KNRMSVQIISYGATITSIQXXXXXXXXXXXXAGFDTLEEYFQPRNPYFGATIGRYANIIR 540
K ++ ++ +GAT+ + GFDT++E F+ G T+GR AN I+
Sbjct: 11 KQGLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDE-FEKDAASIGKTVGRVANRIK 69
Query: 541 DATMVVRPSGRMYMLSNNKXXXXXXXXXXXFDKVNWHSYVNGNQVIMSHV-SERFHEGYP 717
++T+ G+ Y ++ N W + + + V + +G P
Sbjct: 70 NSTL--HFDGKQYTMTPNNGPHYLHGGPNGLGYRKWEVVRHAPESVSFSVRANEQDDGLP 127
Query: 718 GTVMAQITFEV 750
G +T+ V
Sbjct: 128 GDAKIDVTYTV 138
>Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical
protein F36A2.14 protein.
Length = 316
Score = 32.7 bits (71), Expect = 0.29
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +1
Query: 61 NSKFPVKMAEEGDEKASGDVEEDTKTVTPQPEPKIPDVELIVDGFGLM-PKSM-KVPKNR 234
NSK + ++ + + EE KTV+ + + K+ E G L P ++ P
Sbjct: 105 NSKKTAEDMDQSSDDTTKPAEETKKTVSSKKQKKVKSEECDHLGVPLSNPMAITPFPGKT 164
Query: 235 TSNAFEESKQMLKEI--KVTNEEAKSPCSSSTN 327
T+ E+++QMLKE+ K+ ++ K SST+
Sbjct: 165 TAAKREKARQMLKELATKMYEDDLKKQGKSSTS 197
>AL117193-13|CAB55004.2| 478|Caenorhabditis elegans Hypothetical
protein Y105C5A.24 protein.
Length = 478
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 139 VTPQPEPKIPDVELIVDGFGLMPKSMKVPKNRTSNAFEESKQMLKEIKVTNEEAK 303
+TP +PK + + L+P ++KVPK + EE KQ + ++NE+ +
Sbjct: 340 ITPDVKPKEVAPAKVQETPALLPDTLKVPKVERQISNEEEKQKIFMTALSNEDTR 394
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = +1
Query: 73 PVKMAEEGDEKASGDVEEDTKTVTPQPEPKIPDVELIVDGFGLMPKSMKVPKNRTSNAFE 252
P E+ +EK S VE+ T P+PEP+ P + PK+ + KN +S
Sbjct: 590 PQSTEEKTEEKESVKVEDST----PEPEPETPVNSTSEES----PKTNETEKNASSGNAT 641
Query: 253 ESKQMLKEI 279
E K+ KE+
Sbjct: 642 EVKEKKKEL 650
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -2
Query: 460 ILRPHHQERLFCQEPG--LR*SWLHTKLSEHSSYFSFSKCTV 341
+ + H F +E G L W H + S+ S+F+F KCTV
Sbjct: 423 LAKAHTHAEHFAKEYGKDLGRLWSHNEDSQFPSFFAFQKCTV 464
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 79 KMAEEGDEKASGDVEEDTKTVTPQP-EPKIPDVELIVDGFGLMPKSMKVPKNRTSNAFEE 255
K EE E+ + +ED K V P+P EPK P + + G LM K+ + + + +
Sbjct: 196 KKEEEKKEEKKEEKKEDEKKVEPKPGEPK-PHISIEPPG-DLMFKADQQEQKKLTLTNTH 253
Query: 256 SKQMLKEIKVTNEE 297
K+++ +IK ++ +
Sbjct: 254 DKKIMFKIKTSDNQ 267
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +1
Query: 79 KMAEEGDEKASGDVEEDTKTVTPQPEPKI--PDVELIVDGF-GLMPKSMKVPKNRTSNAF 249
++ E+ DE+ GDVEE+ V + + D E+ +D G P P + + F
Sbjct: 811 EIPEQADERVGGDVEEEPMEVEDAEDSDVDEEDNEMSMDEMSGEAPAPPAAPSPKPTKPF 870
Query: 250 EESKQMLKE 276
E M+ E
Sbjct: 871 EYGAGMMCE 879
>Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical
protein F11E6.7 protein.
Length = 1011
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +1
Query: 244 AFEESKQMLKEIKVTNEEAKSPCSSSTNIEVVRRYTWR 357
A E ++++LKE K+ EE +SP +SST E RR T R
Sbjct: 234 ADEVAEKLLKEQKLKAEETQSPKTSST--ETSRRRTSR 269
>Z46934-7|CAA87047.1| 472|Caenorhabditis elegans Hypothetical
protein ZK1320.9 protein.
Length = 472
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/79 (24%), Positives = 37/79 (46%)
Frame = +1
Query: 172 VELIVDGFGLMPKSMKVPKNRTSNAFEESKQMLKEIKVTNEEAKSPCSSSTNIEVVRRYT 351
++LI G K +P S+ +K+ K+I E +PC + +I++VRR +
Sbjct: 281 IDLIDRGIINNQKKAFMPGKTVSSFAFGTKEFYKKIDNNPEFYFAPCDFTNHIDIVRRNS 340
Query: 352 WRTKNRMSVQIISYGATIT 408
T +++I G ++
Sbjct: 341 KMTSINSAIEIDLTGQIVS 359
>Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical
protein D1025.10 protein.
Length = 376
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +1
Query: 85 AEEGDEKASGDVEEDTKTVTPQPEPKIPDVELIV---DGFGLMPKSMKV 222
AEEG E+ +VEED + V E K+ +V + D MPK MK+
Sbjct: 143 AEEGQEEVVEEVEEDEEEVEEIKE-KVEEVREVTPPKDLINGMPKYMKI 190
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,872,254
Number of Sequences: 27780
Number of extensions: 337196
Number of successful extensions: 1160
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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