BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte11c17 (711 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 30 0.016 AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 24 1.4 AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 22 4.3 AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 22 4.3 AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 22 4.3 AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 21 9.9 AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory recept... 21 9.9 >DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation protein. Length = 947 Score = 30.3 bits (65), Expect = 0.016 Identities = 17/52 (32%), Positives = 22/52 (42%) Frame = +1 Query: 256 IKNECVKGEVSSPRESINRPCTVTALDDFDKSVIKQIVSSFYCDGEYPSTAK 411 IKNEC + P R C D +D +I+ IV D E S+ K Sbjct: 85 IKNECPEPTCDEPVHRPGRCCKTCPGDLYDSDIIQDIVPQNVLDEEEKSSTK 136 >AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 protein protein. Length = 371 Score = 23.8 bits (49), Expect = 1.4 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 3/63 (4%) Frame = +1 Query: 493 YKYIQASYGRKQLMERTDIVCARLQFLRKLKTLRDSEDTRPRIYLDE---TWVNQNHSRK 663 Y Y RKQ ERT A+L L L ++ P I++ E +N SR Sbjct: 116 YSYFAGVNPRKQRRERTTFTRAQLDLLEGL----FAKTRYPDIFMREEVAVKINLPESRV 171 Query: 664 RIW 672 ++W Sbjct: 172 QVW 174 >AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain transcription factor Labialprotein. Length = 353 Score = 22.2 bits (45), Expect = 4.3 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = -2 Query: 569 NCSRAQTMSVLSINCL 522 +C + T S+LS+NCL Sbjct: 238 SCLGSNTSSMLSLNCL 253 >AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein protein. Length = 142 Score = 22.2 bits (45), Expect = 4.3 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = -2 Query: 569 NCSRAQTMSVLSINCL 522 +C + T S+LS+NCL Sbjct: 27 SCLGSNTSSMLSLNCL 42 >AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein protein. Length = 142 Score = 22.2 bits (45), Expect = 4.3 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = -2 Query: 569 NCSRAQTMSVLSINCL 522 +C + T S+LS+NCL Sbjct: 27 SCLGSNTSSMLSLNCL 42 >AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor candidate 41 protein. Length = 398 Score = 21.0 bits (42), Expect = 9.9 Identities = 7/16 (43%), Positives = 13/16 (81%) Frame = -2 Query: 173 LGSIFISVKKIKTLLI 126 + ++F+ K+I+TLLI Sbjct: 95 VNAVFVKEKRIRTLLI 110 >AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory receptor candidate 31 protein. Length = 250 Score = 21.0 bits (42), Expect = 9.9 Identities = 6/17 (35%), Positives = 13/17 (76%) Frame = -3 Query: 58 VCRSVLIHMIQWQSNFN 8 +C+++L+H I +S F+ Sbjct: 85 LCKAILVHAITIRSTFS 101 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 169,863 Number of Sequences: 336 Number of extensions: 3639 Number of successful extensions: 9 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 122,585 effective HSP length: 55 effective length of database: 104,105 effective search space used: 18843005 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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