Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c17
         (711 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113191-1|AAM29196.1|  440|Drosophila melanogaster AT01380p pro...    29   8.2  
AE013599-1951|AAF58208.1|  440|Drosophila melanogaster CG12857-P...    29   8.2  

>AY113191-1|AAM29196.1|  440|Drosophila melanogaster AT01380p
           protein.
          Length = 440

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = -2

Query: 377 NDDTICLITLLSKSSNAVTVQGRLMLSRGE---LTSPFTHSFLILST 246
           N+DT C++ + SK + A+ V   LML+R     LT   T  FL L T
Sbjct: 210 NEDTACVLYVESKDNPAMDVVRNLMLTRIRKFLLTFVATRDFLDLPT 256


>AE013599-1951|AAF58208.1|  440|Drosophila melanogaster CG12857-PA
           protein.
          Length = 440

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = -2

Query: 377 NDDTICLITLLSKSSNAVTVQGRLMLSRGE---LTSPFTHSFLILST 246
           N+DT C++ + SK + A+ V   LML+R     LT   T  FL L T
Sbjct: 210 NEDTACVLYVESKDNPAMDVVRNLMLTRIRKFLLTFVATRDFLDLPT 256


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,772,845
Number of Sequences: 53049
Number of extensions: 617108
Number of successful extensions: 1228
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)