Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11c17
(711 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024817-6|AAY86298.2| 488|Caenorhabditis elegans Hypothetical ... 48 7e-06
Z81042-3|CAB02794.2| 660|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL132858-7|CAB60485.1| 107|Caenorhabditis elegans Hypothetical ... 30 1.9
AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein. 29 4.3
AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like ... 29 4.3
U88165-2|AAO12421.1| 597|Caenorhabditis elegans Hypothetical pr... 28 5.7
U88165-1|AAO12420.1| 656|Caenorhabditis elegans Hypothetical pr... 28 5.7
U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical pr... 28 5.7
AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical ... 28 5.7
AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical... 28 5.7
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 7.6
U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical pr... 28 7.6
L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical pr... 28 7.6
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 28 7.6
AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical ... 28 7.6
>AC024817-6|AAY86298.2| 488|Caenorhabditis elegans Hypothetical
protein Y54G2A.42 protein.
Length = 488
Score = 48.0 bits (109), Expect = 7e-06
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Frame = +1
Query: 181 KSVNFCRSRELAAAICGVSVRTVDKIKNECVKGEVSSPRESINRPCTVTAL--DDFDKSV 354
K F + +L A++ G+S TV + + GE +E I++ + + D+ K +
Sbjct: 62 KGTIFDNTNDLVASLLGISSITVYRKRKRI--GEEKPEKEKISKKQRILNMVTDEQRKEI 119
Query: 355 IKQIVSSFYCDGEYPSTAKILSRATERIDGFQCSITSMRKILIELGYKYIQASYGRKQLM 534
+ F D + + + +L ER + FQ +S+ +L + Y +Y +
Sbjct: 120 FDHVQECFRTDTNF-TLSTLLVDLKERFN-FQYGRSSLHDLLRAMDLVYKVKTYN-PMVS 176
Query: 535 ERTDIVCARLQFLRKLKTLRDSEDTRPRIYLDETWVNQNHSRKRIW 672
+R DIV R ++LR++ LR E + DETW+ RK W
Sbjct: 177 DRVDIVAWRGRYLRQISELR--EAGAYITFFDETWIYHGMVRKHGW 220
>Z81042-3|CAB02794.2| 660|Caenorhabditis elegans Hypothetical
protein C27H6.3 protein.
Length = 660
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 409 KILSRATERIDGFQCSITSMRKILIELGYK 498
+ L TE+++ F C +TS ++ I+L YK
Sbjct: 628 RTLEEVTEKLNEFWCKVTSANQVNIDLAYK 657
>AL132858-7|CAB60485.1| 107|Caenorhabditis elegans Hypothetical
protein Y113G7A.13 protein.
Length = 107
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 184 SVNFCRSRELAAAICGVSVRTVDKIKNECVKGEVSSPRESINRPCTVTALD 336
S N S+ L A G+ V I+NE ++G++ P E+ NRP V D
Sbjct: 17 SNNEVSSQLLYQAKQGIEPNNVSNIRNELMRGQLGEPNEN-NRPPPVDRRD 66
>AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein.
Length = 644
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -1
Query: 291 RANFSLYTL---IFNFVDRSNTHTTYRRSKFTR 202
+ N SL TL I + VD +TH YR SK TR
Sbjct: 256 KINLSLSTLGNVISSLVDGKSTHIPYRNSKLTR 288
>AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like
protein protein 20 protein.
Length = 646
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -1
Query: 291 RANFSLYTL---IFNFVDRSNTHTTYRRSKFTR 202
+ N SL TL I + VD +TH YR SK TR
Sbjct: 258 KINLSLSTLGNVISSLVDGKSTHIPYRNSKLTR 290
>U88165-2|AAO12421.1| 597|Caenorhabditis elegans Hypothetical
protein F54C1.5b protein.
Length = 597
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +1
Query: 214 AAAICGVSVRTVDKIKNECVKGEVSSPRES---INRPCTVTALDDFDKSVIKQIVSSFYC 384
A A+ VS+ + + NE VK E + + +N V L + D +VI Y
Sbjct: 35 ADALAVVSMIQDENLLNESVKLEAAIKYQEDDLVNCRILVEQLPENDAAVIINTACIDYK 94
Query: 385 DGEYPSTAKILSRATERIDGFQCSI 459
+G Y K + ATE G+Q +
Sbjct: 95 EGNYEEALKKFNEATE-FSGYQSGL 118
>U88165-1|AAO12420.1| 656|Caenorhabditis elegans Hypothetical
protein F54C1.5a protein.
Length = 656
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +1
Query: 214 AAAICGVSVRTVDKIKNECVKGEVSSPRES---INRPCTVTALDDFDKSVIKQIVSSFYC 384
A A+ VS+ + + NE VK E + + +N V L + D +VI Y
Sbjct: 94 ADALAVVSMIQDENLLNESVKLEAAIKYQEDDLVNCRILVEQLPENDAAVIINTACIDYK 153
Query: 385 DGEYPSTAKILSRATERIDGFQCSI 459
+G Y K + ATE G+Q +
Sbjct: 154 EGNYEEALKKFNEATE-FSGYQSGL 177
>U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical
protein R05G6.2 protein.
Length = 339
Score = 28.3 bits (60), Expect = 5.7
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Frame = +1
Query: 430 ERIDGFQCSITSMRKILIELGYK-----YIQASYGRKQLMERTDIVCARLQFLRKLKTLR 594
E + +C +++ + L LG+ ++ Q + R ++ L F RK L
Sbjct: 91 EMEEKLECCHSTIARHLGRLGFTSKLGTWVPHELSASQKLTRVNVCTQLLTFRRKFDWLN 150
Query: 595 DSEDTRPRIYLDETWVNQ-NHSRKRIWLDKDGQGGLNT 705
+ + DE WV NHSRKR WL G+ G+ T
Sbjct: 151 NL------VTGDEKWVLYVNHSRKRQWL-PIGEKGIPT 181
>AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical
protein Y49F6A.4 protein.
Length = 514
Score = 28.3 bits (60), Expect = 5.7
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Frame = +1
Query: 430 ERIDGFQCSITSMRKILIELGYK-----YIQASYGRKQLMERTDIVCARLQFLRKLKTLR 594
E + +C +++ + L LG+ ++ Q + R ++ L F RK L
Sbjct: 66 EMEEKLECCHSTIARHLGRLGFTSKLGTWVPHELSASQKLTRVNVCTQLLTFRRKFDWLN 125
Query: 595 DSEDTRPRIYLDETWVNQ-NHSRKRIWLDKDGQGGLNT 705
+ + DE WV NHSRKR WL G+ G+ T
Sbjct: 126 NL------VTGDEKWVLYVNHSRKRQWL-PIGEKGIPT 156
>AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical
protein Y45G12C.13 protein.
Length = 384
Score = 28.3 bits (60), Expect = 5.7
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Frame = +1
Query: 430 ERIDGFQCSITSMRKILIELGYK-----YIQASYGRKQLMERTDIVCARLQFLRKLKTLR 594
E + +C +++ + L LG+ ++ Q + R ++ L F RK L
Sbjct: 91 EMEEKLECCHSTIARHLGRLGFTSKLGIWVPHELSASQKLTRVNVCTQLLTFRRKFDWLN 150
Query: 595 DSEDTRPRIYLDETWVNQ-NHSRKRIWLDKDGQGGLNT 705
+ + DE WV NHSRKR WL G+ G+ T
Sbjct: 151 NL------VTGDEKWVLYVNHSRKRQWL-PIGEKGIPT 181
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 376 FYCDGEYPSTAKILSRATERIDGFQCSITSMRKILIELGYKYIQASY 516
FY D E KI+ + +R+DG Q + + L +L I+++Y
Sbjct: 844 FYADRENKVQIKIIETSWQRVDGQQATREHLLMTLADLDTLLIKSTY 890
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 376 FYCDGEYPSTAKILSRATERIDGFQCSITSMRKILIELGYKYIQASY 516
FY D E KI+ + +R+DG Q + + L +L I+++Y
Sbjct: 844 FYADRENKVQIKIIETSWQRVDGQQATREHLLMTLADLDTLLIKSTY 890
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 376 FYCDGEYPSTAKILSRATERIDGFQCSITSMRKILIELGYKYIQASY 516
FY D E KI+ + +R+DG Q + + L +L I+++Y
Sbjct: 844 FYADRENKVQIKIIETSWQRVDGQQATREHLLMTLADLDTLLIKSTY 890
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 376 FYCDGEYPSTAKILSRATERIDGFQCSITSMRKILIELGYKYIQASY 516
FY D E KI+ + +R+DG Q + + L +L I+++Y
Sbjct: 844 FYADRENKVQIKIIETSWQRVDGQQATREHLLMTLADLDTLLIKSTY 890
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 376 FYCDGEYPSTAKILSRATERIDGFQCSITSMRKILIELGYKYIQASY 516
FY D E KI+ + +R+DG Q + + L +L I+++Y
Sbjct: 844 FYADRENKVQIKIIETSWQRVDGQQATREHLLMTLADLDTLLIKSTY 890
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 376 FYCDGEYPSTAKILSRATERIDGFQCSITSMRKILIELGYKYIQASY 516
FY D E KI+ + +R+DG Q + + L +L I+++Y
Sbjct: 844 FYADRENKVQIKIIETSWQRVDGQQATREHLLMTLADLDTLLIKSTY 890
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 376 FYCDGEYPSTAKILSRATERIDGFQCSITSMRKILIELGYKYIQASY 516
FY D E KI+ + +R+DG Q + + L +L I+++Y
Sbjct: 844 FYADRENKVQIKIIETSWQRVDGQQATREHLLMTLADLDTLLIKSTY 890
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 376 FYCDGEYPSTAKILSRATERIDGFQCSITSMRKILIELGYKYIQASY 516
FY D E KI+ + +R+DG Q + + L +L I+++Y
Sbjct: 844 FYADRENKVQIKIIETSWQRVDGQQATREHLLMTLADLDTLLIKSTY 890
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 376 FYCDGEYPSTAKILSRATERIDGFQCSITSMRKILIELGYKYIQASY 516
FY D E KI+ + +R+DG Q + + L +L I+++Y
Sbjct: 844 FYADRENKVQIKIIETSWQRVDGQQATREHLLMTLADLDTLLIKSTY 890
>U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical
protein F32E10.2 protein.
Length = 270
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 271 VKGEVSSPRESINRPCTVTALDDFDKSVIKQIVSSFYCDGEYPSTAKILSRATE 432
V+GE +P+ + + T DDF K + ++V Y + E T+ ATE
Sbjct: 6 VEGEHGTPKTNFTKKETSKNHDDFKKIIGHKVVEEHYVEYEVELTSGKTITATE 59
>L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical
protein C06E1.8 protein.
Length = 397
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Frame = +1
Query: 250 DKIKNECVKGEV---SSPR-ESINRPCTVTALDDFDKSVIKQIVSSFYCDGEYPSTAKIL 417
+KIK+E K +V SP S++ ++A + ++SS D PS++
Sbjct: 226 EKIKDEVEKPDVYTSQSPTCSSVSFKSDLSAFHQLCSD--RALISSPLIDTASPSSSSSS 283
Query: 418 SRATERIDGFQCSITSMRKILIELGYKYIQASYGRKQ 528
SR + R + F C ++ + ++ E K ++ G Q
Sbjct: 284 SRISPRHECFDCHVSRTKILISENKCKLLEHKIGTMQ 320
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 376 FYCDGEYPSTAKILSRATERIDGFQCSITSMRKILIELGYKYIQASY 516
FY D E KI+ + +R+DG Q + + L +L I+++Y
Sbjct: 843 FYADRENKVQIKIIETSWQRVDGQQATREHLLMTLADLDTLLIKSTY 889
>AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical
protein Y47H9C.9 protein.
Length = 829
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/81 (20%), Positives = 37/81 (45%)
Frame = +1
Query: 397 PSTAKILSRATERIDGFQCSITSMRKILIELGYKYIQASYGRKQLMERTDIVCARLQFLR 576
P + K+ + + +D F+C ++ +I +E + +LME D+ A+ ++
Sbjct: 585 PESWKLTTEDSPDVDCFECRSMTVNRIEMEAESTIAHLENEKNKLME--DLRLAQAEYDS 642
Query: 577 KLKTLRDSEDTRPRIYLDETW 639
++T + R L+E W
Sbjct: 643 LIQTAGGGGQNKTRKRLEEIW 663
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,273,369
Number of Sequences: 27780
Number of extensions: 337194
Number of successful extensions: 814
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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