Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c17
         (711 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   1.2  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          23   2.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.2  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         23   2.9  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   8.7  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   8.7  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 571 LRKLKTLRDSEDTRPRIYLDETWVNQNHS 657
           L KL T+ D++  + R YLD     QN+S
Sbjct: 560 LGKLSTIEDADKNQCRHYLDAKSSVQNYS 588


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 628 DETWVNQNHSRKRIW 672
           DE WV  N  RKR W
Sbjct: 32  DEKWVVNNIKRKRWW 46


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
 Frame = +1

Query: 238 VRTVDKIKNECVKGEVS--------SPRESINRPCTVTALDDFDKSVIKQIVSSFYCDGE 393
           ++  D I N  ++GE S        SP E      T+TA        + Q  +S Y    
Sbjct: 721 LKRTDIIHNYIMRGEASPRSPNASPSPAEQCASTTTITARSPQGSQGLLQCATSNYSTTR 780

Query: 394 YPSTAKILSRATER 435
           +P+T+ I +    R
Sbjct: 781 WPATSVITTTTGAR 794


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 568 IVAAHKRCQSFPSIVYD 518
           I   H  C S P +VYD
Sbjct: 11  IAIVHASCASVPKVVYD 27


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 467 IEVMEHWNPSILSVALLKIL 408
           IE++EHW P + +  L  IL
Sbjct: 496 IELIEHWMPLLPNWILENIL 515


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -1

Query: 138 NIVDNNTCLCLLLKCFEFVVGTNICQ 61
           +IV  +  +CLL +  + ++G + CQ
Sbjct: 5   HIVGASVLICLLNETAKAIIGVDECQ 30


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,165
Number of Sequences: 438
Number of extensions: 4025
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)