Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c16
         (722 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16R45 Cluster: Putative uncharacterized protein; n=1; ...    39   0.14 
UniRef50_UPI00006CA728 Cluster: hypothetical protein TTHERM_0084...    37   0.58 
UniRef50_UPI0000DB70FC Cluster: PREDICTED: similar to CG10189-PA...    36   1.3  
UniRef50_A3TG52 Cluster: Putative uncharacterized protein; n=1; ...    34   3.1  

>UniRef50_Q16R45 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 490

 Score = 38.7 bits (86), Expect = 0.14
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +1

Query: 352 LMKDENFNSKLNEAEKRAWAAFVKVCHNFLGNRKSENY*QI 474
           ++ DE+F + LN  E  AW +F +V   +LGN +S +Y +I
Sbjct: 1   MLNDEDFYTVLNNHEAEAWKSFQRVVAEYLGNTRSPDYEEI 41


>UniRef50_UPI00006CA728 Cluster: hypothetical protein
           TTHERM_00842550; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00842550 - Tetrahymena
           thermophila SB210
          Length = 808

 Score = 36.7 bits (81), Expect = 0.58
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = +3

Query: 129 IKTLNPGLKNVSQKPLVPSEKKFLPPLT*GWDSRKTISKININE*FQYLKTKIPRISDAK 308
           +K     + N+  K ++ SEKK+L  +   W S     + N+N+  Q LKTKI   +  K
Sbjct: 399 VKNQIDSILNLPSKKIIKSEKKYLDFIEQKWQSDYNFLQQNLNDCIQQLKTKISEYNSNK 458

Query: 309 LKEEI 323
              E+
Sbjct: 459 NSIEL 463


>UniRef50_UPI0000DB70FC Cluster: PREDICTED: similar to CG10189-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG10189-PA - Apis mellifera
          Length = 387

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = +1

Query: 469 QIIRELL-FAYKALGCNMSLKIYFSDSLLDLFPENLGAVSDEYGERFHQDIMHIEKRYSG 645
           Q+ R+LL FA + L CN   K++ +D+ +DL  + LG VS   G +   ++   ++RYS 
Sbjct: 209 QLRRKLLVFAARKLNCN---KVFIADTSIDLAIKVLGDVSTGRGSQLSFNVAFSDERYSD 265

Query: 646 KWSAAVLADF 675
                 L DF
Sbjct: 266 VKLLRPLRDF 275


>UniRef50_A3TG52 Cluster: Putative uncharacterized protein; n=1;
           Janibacter sp. HTCC2649|Rep: Putative uncharacterized
           protein - Janibacter sp. HTCC2649
          Length = 429

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 18/33 (54%), Positives = 21/33 (63%)
 Frame = +1

Query: 562 PENLGAVSDEYGERFHQDIMHIEKRYSGKWSAA 660
           P  LG +S EYG RFH  I HI K +SG+  AA
Sbjct: 305 PTTLGWISSEYGMRFH-PIQHIWKLHSGRDYAA 336


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,457,647
Number of Sequences: 1657284
Number of extensions: 12971587
Number of successful extensions: 28181
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28180
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)