Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c16
         (722 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0836 - 6795224-6795263,6796027-6796128,6796264-6796401,679...    28   6.5  
07_01_0482 + 3627980-3628270,3628785-3629012,3629116-3629237,362...    28   6.5  

>07_01_0836 -
           6795224-6795263,6796027-6796128,6796264-6796401,
           6796790-6796932,6797388-6797607,6798087-6798208,
           6798317-6798544,6798993-6799355
          Length = 451

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +1

Query: 331 INRYLRELMKDENFNSKLNEAEKRAW 408
           +NR L+E++  +NF+S LN+ + R W
Sbjct: 187 LNR-LKEIIDSKNFSSPLNQLQNRIW 211


>07_01_0482 +
           3627980-3628270,3628785-3629012,3629116-3629237,
           3629747-3629966,3630434-3630576,3631004-3631141,
           3631275-3631380
          Length = 415

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +1

Query: 331 INRYLRELMKDENFNSKLNEAEKRAW 408
           +NR L+E++  +NF+S LN+ + R W
Sbjct: 163 LNR-LKEIIDSKNFSSPLNQLQNRIW 187


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,110,116
Number of Sequences: 37544
Number of extensions: 328098
Number of successful extensions: 631
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)