Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c14
         (771 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1360 - 25991173-25991261,25991496-25991586,25992318-259924...    31   1.3  
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265...    30   2.4  
03_06_0220 + 32452831-32452944,32453618-32453911,32454416-324545...    28   7.2  
11_04_0288 - 15802010-15803506                                         28   9.5  

>07_03_1360 -
           25991173-25991261,25991496-25991586,25992318-25992409,
           25992586-25992673,25992826-25992888,25992975-25993086,
           25993255-25993335,25993437-25993541,25993652-25993698,
           25993793-25993912
          Length = 295

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +1

Query: 181 IASKLGISDEEKVLRKAAEFERLLE 255
           IAS+LG+S    V+RKAAE  RL +
Sbjct: 6   IASRLGLSGSRPVVRKAAELRRLCD 30


>02_01_0369 +
           2649178-2655291,2655773-2656601,2656737-2657425,
           2657523-2657649,2657731-2657812,2658172-2658196
          Length = 2621

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = +2

Query: 254 KQNLRLAATLLIQKQAIK-YSGLRPTVYANSKKIISNRLELDVDRLSV 394
           K+NL L ATL  +K+A K     R  + + +K+++SN  +L++   S+
Sbjct: 498 KENLELTATLTFEKEARKEVEEQREHLCSENKRVLSNLSDLELSLASL 545


>03_06_0220 +
           32452831-32452944,32453618-32453911,32454416-32454503,
           32454596-32454717,32454985-32455142,32455201-32455273,
           32455552-32455640,32455753-32455858,32455967-32456179,
           32456726-32456920,32457051-32457128,32457209-32457523
          Length = 614

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/50 (24%), Positives = 27/50 (54%)
 Frame = +2

Query: 296 QAIKYSGLRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQALAE 445
           +A+  SGLR   YA    ++   + LD+D+  +     +++ +G  A+++
Sbjct: 136 EALAASGLRSIRYAREIDVLEKVVALDIDKACIEACKRNIKFNGASAMSK 185


>11_04_0288 - 15802010-15803506
          Length = 498

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +2

Query: 350 IISNRLELDVDRLSVAVLCASLQNSG 427
           +I N  E+ +D+++ A LCASL++ G
Sbjct: 277 VIKNTYEVVIDKVAWATLCASLRSIG 302


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,732,754
Number of Sequences: 37544
Number of extensions: 258917
Number of successful extensions: 701
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)