Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c14
         (771 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    26   0.45 
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    26   0.45 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    24   1.4  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   5.5  

>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 25.8 bits (54), Expect = 0.45
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = +2

Query: 605 NKLEADWSQFADTHFAVKKRGKKEVKNSIENVEENVPMEVDSSKQEEPIETFEPY 769
           ++L  +W + A   F    RGKK + +++E +++   M+     Q +   TF+ Y
Sbjct: 172 DELLGEWEKRAPMGF-YGTRGKKIILDALEELDKRGVMDFQIGLQRKKDTTFDDY 225


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 25.8 bits (54), Expect = 0.45
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = +2

Query: 605 NKLEADWSQFADTHFAVKKRGKKEVKNSIENVEENVPMEVDSSKQEEPIETFEPY 769
           ++L  +W + A   F    RGKK + +++E +++   M+     Q +   TF+ Y
Sbjct: 172 DELLGEWEKRAPMGF-YGTRGKKIILDALEELDKRGVMDFQIGLQRKKDTTFDDY 225


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = +2

Query: 608 KLEADWSQFADTHFAVKKRGKKEVKNSIENVEENVPMEVD 727
           +++  W  F D +F   ++ +  +++   N + NVP++VD
Sbjct: 33  QVKYQWKYF-DYNFGSDEKRQAAIQSGEYNYKNNVPIDVD 71


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/32 (25%), Positives = 20/32 (62%)
 Frame = +2

Query: 641 THFAVKKRGKKEVKNSIENVEENVPMEVDSSK 736
           TH  ++K  +  ++N +E ++  VP+  ++S+
Sbjct: 52  THNELEKNRRAHLRNCLEKLKVLVPLGPETSR 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,652
Number of Sequences: 438
Number of extensions: 3096
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)