Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c14
         (771 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g50030.1 68416.m05470 hypothetical protein                          29   2.6  
At2g22560.1 68415.m02674 kinase interacting protein-related simi...    29   3.4  
At5g24060.1 68418.m02826 expressed protein strong similarity to ...    29   4.5  
At4g29690.1 68417.m04229 type I phosphodiesterase/nucleotide pyr...    28   5.9  
At3g51090.1 68416.m05594 expressed protein                             28   5.9  

>At3g50030.1 68416.m05470 hypothetical protein 
          Length = 501

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 23/79 (29%), Positives = 39/79 (49%)
 Frame = +2

Query: 233 LSLNDS*KQNLRLAATLLIQKQAIKYSGLRPTVYANSKKIISNRLELDVDRLSVAVLCAS 412
           L L DS   N+R+A  +L     IKYSGL+ T    + + I N  E+ V+R     L + 
Sbjct: 295 LLLKDS---NVRVAQIVLQDYHKIKYSGLKMTT-EEAHRSIENLWEIKVERKKKEKLMSE 350

Query: 413 LQNSGVQALAEKILEQYKQ 469
            +    + + + + +Q K+
Sbjct: 351 TELEERRKMVKSLKKQGKK 369


>At2g22560.1 68415.m02674 kinase interacting protein-related similar
           to kinase interacting protein 1 (GI:13936326) [Petunia
           integrifolia]; weak similarity to Myosin II heavy chain,
           non muscle (Swiss-Prot:P08799) [Dictyostelium discoideum
          Length = 891

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 17/75 (22%), Positives = 35/75 (46%)
 Frame = +2

Query: 254 KQNLRLAATLLIQKQAIKYSGLRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQ 433
           K  +R+A   L  ++++KY+G    V   S  +       ++D+L   +L    +   V+
Sbjct: 86  KSAVRVATKKLQPRKSMKYTGGSTNVVVKSSGLSKPEAMGEIDKLQKEILALQTEKEFVK 145

Query: 434 ALAEKILEQYKQYSK 478
           +  E  L +Y ++ K
Sbjct: 146 SSYEIGLSKYWEFEK 160


>At5g24060.1 68418.m02826 expressed protein strong similarity to
           unknown protein (emb|CAB61996.1); expression supported
           by MPSS
          Length = 464

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +2

Query: 320 RPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQALAEKIL 454
           +P V A +   I  RLE D D+L+ A+     +N+G+QA   K++
Sbjct: 359 QPDVIACASDGILTRLEEDGDKLTEALRSLCWRNNGIQAEEVKLI 403


>At4g29690.1 68417.m04229 type I phosphodiesterase/nucleotide
           pyrophosphatase family protein similar to SP|P22413
           Ectonucleotide pyrophosphatase/phosphodiesterase 1
           (Plasma-cell membrane glycoprotein PC-1) [Includes:
           Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide
           pyrophosphatase (EC 3.6.1.9) {Homo sapiens}; contains
           Pfam profile PF01663: Type I phosphodiesterase /
           nucleotide pyrophosphatase
          Length = 457

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 596 AQWNKLEADWSQFADTHFAVKKRGKKEVKN 685
           A W K+ ADW Q      A+  R  K+VKN
Sbjct: 284 ADWIKIPADWIQDYSPVLAMNPRWGKDVKN 313


>At3g51090.1 68416.m05594 expressed protein
          Length = 298

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/52 (21%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +2

Query: 575 EKARL-KPAQWNKLEADWSQFADTHFAVKKRGKKEVKNSIENVEENVPMEVD 727
           +KA + + +  +K +++ +   D HF++ +   ++++N IE +  ++  E+D
Sbjct: 171 QKAEMTQESNLSKFKSEINSSLDHHFSLLQHENEKLRNDIERIRSDIRHEID 222


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,505,591
Number of Sequences: 28952
Number of extensions: 232079
Number of successful extensions: 682
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1716774400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)