Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11c13
(784 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_47305| Best HMM Match : I-set (HMM E-Value=0) 33 0.20
SB_50998| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 33 0.26
SB_13057| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_38293| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 0.44
SB_33342| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_8818| Best HMM Match : I-set (HMM E-Value=0) 32 0.46
SB_8819| Best HMM Match : I-set (HMM E-Value=0) 31 0.80
SB_47306| Best HMM Match : I-set (HMM E-Value=0) 31 1.1
SB_21023| Best HMM Match : I-set (HMM E-Value=2e-07) 30 1.8
SB_53605| Best HMM Match : Ribosomal_L36 (HMM E-Value=1.5) 29 3.2
SB_10900| Best HMM Match : I-set (HMM E-Value=0) 29 4.2
SB_20844| Best HMM Match : Ion_trans (HMM E-Value=0) 29 4.2
SB_59380| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_46235| Best HMM Match : I-set (HMM E-Value=7.6) 29 5.6
SB_42560| Best HMM Match : ig (HMM E-Value=2.4e-06) 29 5.6
SB_58669| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_57835| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 28 7.4
SB_11883| Best HMM Match : I-set (HMM E-Value=0) 28 7.4
SB_4361| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_3041| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_46816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_33828| Best HMM Match : rve (HMM E-Value=3.9e-20) 28 7.4
SB_33095| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_24579| Best HMM Match : rve (HMM E-Value=0.085) 28 7.4
SB_21743| Best HMM Match : rve (HMM E-Value=4e-17) 28 7.4
SB_8817| Best HMM Match : I-set (HMM E-Value=0) 28 7.4
SB_5575| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_57810| Best HMM Match : MMR_HSR1 (HMM E-Value=3.6e-07) 28 9.8
SB_53393| Best HMM Match : RVT_1 (HMM E-Value=5.8e-30) 28 9.8
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_9948| Best HMM Match : Autophagy_N (HMM E-Value=4.9) 28 9.8
SB_8756| Best HMM Match : DUF1168 (HMM E-Value=1) 28 9.8
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 33.9 bits (74), Expect = 0.15
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 596 GDVWALVIKSVKPSDAGLYMCEL-NTEPPVRSFHRLTVISRGLTPPENRNITDTYSA 763
GDV L I+ VK D G+Y C N+ S LTV+ R P + D S+
Sbjct: 2603 GDVCTLTIRDVKLGDEGIYRCNAKNSSGSAHSSAELTVLEREARPRILEKLQDVDSS 2659
Score = 31.9 bits (69), Expect = 0.60
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 6/124 (4%)
Frame = +2
Query: 401 TVKSGEDALLTCVVLGARGRPVFWRRARDLQLLTAG----AVRVTRDDRIQVLHDDSEEP 568
TV + + L+ V G PV + +D+ ++ ++RV+ + D+
Sbjct: 965 TVSTSAEVLVNEVEKGVG--PVIEEKLKDVTVMPGEEAEFSIRVSGRAEVDWFKDEVMLN 1022
Query: 569 LQGPGIKKGGDV--WALVIKSVKPSDAGLYMCELNTEPPVRSFHRLTVISRGLTPPENRN 742
+G I +GGD ++L I V+P D G Y C + E + I + PE +
Sbjct: 1023 DEGRFIMEGGDNGRFSLTISDVRPEDKGTYKCLVFNESGKVTTRAKLCIKEAIVAPEEVD 1082
Query: 743 ITDT 754
+T
Sbjct: 1083 AAET 1086
Score = 31.5 bits (68), Expect = 0.80
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 596 GDVWALVIKSVKPSDAGLYMCELNTEPPVRSFHRLTVISRGLTPPE 733
G+V L +P D G Y C + E S H V+S+ L PE
Sbjct: 3192 GEVCKLTFYETQPEDEGDYTCVASNEAGEASSHASLVLSKPLVMPE 3237
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 587 KKGGDVWALVIKSVKPSDAGLYMCELNTE 673
+K GD LV+ + K DAG Y CE N +
Sbjct: 1913 RKRGDESHLVVFNAKMEDAGSYKCEANNK 1941
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 602 VWALVIKSVKPSDAGLYMCELNTEPPVRSFHRLTVISRGLTPP 730
+++LVI + K +DAG Y C E S +++ L PP
Sbjct: 2998 LYSLVISNTKVADAGGYKCTALNESGKSSTRAELLVNERLIPP 3040
>SB_47305| Best HMM Match : I-set (HMM E-Value=0)
Length = 5832
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 584 IKKGGDVWALVIKSVKPSDAGLYMCELNTE--PPVRSFHRLTVISRGLTP 727
+K GDV L I +D G Y CE + P R+F ++TV+ +G+ P
Sbjct: 428 LKATGDVHELSIPKASTNDEGQYFCEASNPLGSPKRTF-KVTVVPKGVAP 476
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 584 IKKGGDVWALVIKSVKPSDAGLYMCE 661
I+ GD + LVI S P D+GLY CE
Sbjct: 3636 IRSRGDHYYLVIPSAAPEDSGLYKCE 3661
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 584 IKKGGDVWALVIKSVKPSDAGLYMCE 661
I+ G+V+ L I ++KP DAG Y CE
Sbjct: 2884 IRSRGNVYYLGILNLKPEDAGTYTCE 2909
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 584 IKKGGDVWALVIKSVKPSDAGLYMC 658
IK GD+ LV+ V P DAG+Y C
Sbjct: 970 IKCYGDLHGLVLYKVSPEDAGMYTC 994
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = +2
Query: 452 RGRPVFWRRARDLQLLTAG----AVRVTRDDRIQVLHDDSEEPLQGPG---IKKGGDVWA 610
R +P F R R++ + G +VRV R +++ L G I + GD++
Sbjct: 4548 RMKPTFVERLREVTTVFGGEASFSVRVKGFPRPKIVWYKDITRLINRGRFHISEEGDLYN 4607
Query: 611 LVIKSVKPSDAGLYMCELN 667
L I++V D+G YMC L+
Sbjct: 4608 LTIENVGRDDSGTYMCILS 4626
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 596 GDVWALVIKSVKPSDAGLYMCELNTEPPVRSFHRLTVISRGLTPPE 733
G V L+++ DAGLY C + + S ++R LT PE
Sbjct: 4805 GKVIRLIVRRTTLEDAGLYRCTILNDLGTASSMADLSVNRALTKPE 4850
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 584 IKKGGDVWALVIKSVKPSDAGLYMCELNTE 673
I+ GDV+ L+I K AG Y CE ++
Sbjct: 5198 IRSCGDVYHLIILFTKSEHAGTYSCEATSK 5227
>SB_50998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 308 TSVENTSTSTDSSQEDVEPKEAWMRAPGGGVTVKSGEDALLTCVVLGARGRPVFWRRA 481
TS++ S +Q + +P E P TV++GE LTCV+ G V W +A
Sbjct: 53 TSLKRAKNSRHHTQYNTDPPEI---TPIQNTTVRAGETITLTCVLAGNPTPSVSWSKA 107
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 33.1 bits (72), Expect = 0.26
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +2
Query: 509 AVRVTRDDRIQVLHDDSEEP---LQGPGIKKGGDVWALVIKSVKPSDAGLYMCELNTEPP 679
+V++T +V E+P +Q + D++ L I+ P+D+G Y C L T
Sbjct: 4975 SVKITGKPVPEVSWTKDEKPVHKIQNIRLDHQDDIYTLTIREATPNDSGSYKCTL-TNDA 5033
Query: 680 VRSFHRLTVISRGLTPPENRNITD 751
+S +V G T PE T+
Sbjct: 5034 GKSTRTFSVEIEGETKPEKGKPTE 5057
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 596 GDVWALVIKSVKPSDAGLYMCE-LNTEPPVRSFHRLTVIS-RGLTPPE-NRNITD 751
G+V+ LVIK + SD G Y+C+ N+ V S + V+ PP+ RN+ D
Sbjct: 2254 GEVYTLVIKEARGSDTGKYLCKAYNSAGEVTSSCNVDVLHVAPKEPPKFERNLKD 2308
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 596 GDVWALVIKSVKPSDAGLYMCELNTEPPVR--SFHRLTVISRGLTP 727
GDV L I+ V P D G Y C + T P + + LTV RG P
Sbjct: 2449 GDVCVLTIRGVTPDDEGSYKC-IATNPAGQDDTVAELTVAKRGNPP 2493
Score = 29.5 bits (63), Expect = 3.2
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Frame = +2
Query: 401 TVKSGEDAL-LTCVVLGARGRPVFWRRARDLQLLTAGA-----VRVTRDDRIQVLHDDSE 562
T K+G+D+ + +V A P F R+ +++L T G VR+T +V E
Sbjct: 3135 TSKAGKDSCSVELLVDEAVVPPEFVRKISNIEL-TEGEIARFDVRITGTPAPEVTWYKDE 3193
Query: 563 EPLQGPG---IKKGGDVWALVIKSVKPSDAGLYMCELNTEPPVRSFHRLTVISRGLTPP 730
P++ G I D +LVI+ SD G Y C+ E S + I+ PP
Sbjct: 3194 VPIEDGGRFEIYSDDDKHSLVIRDCALSDTGSYSCKATNEAGQASCYGELTITFIPVPP 3252
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 584 IKKGGDVWALVIKSVKPSDAGLYMCELNTE 673
+ + D ++L I+ V P D+G Y C E
Sbjct: 3302 LHRSNDTYSLTIRGVGPDDSGAYTCTATNE 3331
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +2
Query: 533 RIQVLHDDSEEPLQGPGIKKGGDVWALVIKSVKPSDAGLYMCELNTE 673
R + D S P Q + D L I+ P+D G Y C ++++
Sbjct: 4729 RPKFTEDGSFVPFQSTNEDRQDDTHTLTIREPSPNDTGSYKCTISSD 4775
>SB_13057| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 892
Score = 32.7 bits (71), Expect = 0.34
Identities = 39/124 (31%), Positives = 52/124 (41%), Gaps = 4/124 (3%)
Frame = +2
Query: 413 GEDALLTCVVLGARGRPVFWRRARDLQLLTAGAVRVTRDDRIQVLHDDSEEPLQGPGIKK 592
G D L C V R +R A ++Q L RV + R+Q + S +K
Sbjct: 37 GNDLTLKCAVKAGIPRVWMYRGANEVQKLA----RV-ENKRVQYYPNLSRIFGLRASVKS 91
Query: 593 GGDVWALVIKSVKPSDAGLYMCELNTEPPVRSFHRLTVISRGLTPPENRNI---TDTY-S 760
G +LVI+S SD G Y+CE E R + L RG E N+ TDT S
Sbjct: 92 NG---SLVIRSTVGSDEGTYVCE--NEAHERVLYDLEFNCRGKVTHETLNVCTPTDTEGS 146
Query: 761 AYTP 772
+ P
Sbjct: 147 VFVP 150
>SB_38293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1732
Score = 28.3 bits (60), Expect(2) = 0.44
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +2
Query: 386 PGGGVTVKSGEDALLTCVVLGARGRPVFWRRARDLQLLTAGAVRVTRDDRI 538
PG VTV + A L+C G V W R+ +L G D +I
Sbjct: 151 PGANVTVNKTDKAELSCSATGNPTPNVTWTRSGGADVLGTGETLTISDVKI 201
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 611 LVIKSVKPSDAGLYMCELNTEPPVRSFH--RLT---VISRGLTPPENRNITDTYSA 763
L IK V+P DAG+Y L + +F + T ++ G+TP N + T A
Sbjct: 108 LTIKDVQPQDAGVYAMRLANDDGKTTFEASKFTLDVLVPPGVTPGANVTVNKTDKA 163
Score = 22.6 bits (46), Expect(2) = 0.44
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 611 LVIKSVKPSDAGLYMC 658
L I VK SD G Y+C
Sbjct: 194 LTISDVKISDGGCYVC 209
>SB_33342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1189
Score = 32.3 bits (70), Expect = 0.46
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
Frame = +2
Query: 461 PVFWRRARDLQLLTAGAV--RVTRDD--RIQVLHDDSEEPLQGPGIKKGGDVWALVIKSV 628
PVF +R RD T V T D + V + + K GD + L ++ +
Sbjct: 384 PVFIKRLRDHNAYTGSVVTFNCTADGNPKPNVYWSKNGYKIGSTDFTKVGDGF-LKVEDL 442
Query: 629 KPSDAGLYMC-ELNTEPPVRSFHRLTVISRGLTPPENRNITDTYSAYTPT 775
PSD G+Y C N+ +++ L+V G+ P R T +A TPT
Sbjct: 443 LPSDMGMYQCFATNSLGSIQASAELSVYKTGVPLPTTRLPT---TAQTPT 489
>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
Length = 2787
Score = 32.3 bits (70), Expect = 0.46
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 596 GDVWALVIKSVKPSDAGLYMCELNTEPPVRSFHRLTVISRGLTPPE 733
GD+++L+I + KP D+G+Y+C+ + + I L PE
Sbjct: 468 GDLFSLIIGNAKPLDSGVYICQATNDTGKATAEAEIQIEELLVAPE 513
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +2
Query: 443 LGARGRPVFWRRARDLQLLTAGAVRVTRDDRIQVLHDDSEEPLQ-GPG--IKKGGDVWAL 613
+G + P+ R+ D+ + GA ++T + V +PL+ GP I+ D++
Sbjct: 1284 VGDQAAPIVVRQGEDIDI---GA-QITAKPKPNVKWYKDGKPLRDGPRTTIRARDDLYNC 1339
Query: 614 VIKSVKPSDAGLYMCE 661
+ S KP D G+Y CE
Sbjct: 1340 KVLSAKPEDTGMYKCE 1355
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 596 GDVWALVIKSVKPSDAGLYMC-ELNTEPPVRSFHRLTVISRGLTP 727
G V AL +K +K SDAGLY C N++ S +T+ + P
Sbjct: 2276 GSVSALELKEMKLSDAGLYKCTATNSQGSTSSSAEVTIKRKDAIP 2320
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 584 IKKGGDVWALVIKSVKPSDAGLYMCE 661
I+ GD + L I + +P DAG Y CE
Sbjct: 872 IRPRGDTYTLNIHTTEPEDAGSYTCE 897
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 584 IKKGGDVWALVIKSVKPSDAGLYMC 658
I + GD +L+I +++P DAG Y C
Sbjct: 2368 ILEDGDRCSLIITNLRPEDAGTYKC 2392
>SB_8819| Best HMM Match : I-set (HMM E-Value=0)
Length = 1789
Score = 31.5 bits (68), Expect = 0.80
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 587 KKGGDVWALVIKSVKPSDAGLYMCELNTEPPVRSFHRLTVISRGLTP 727
K GD +++ I P DAG YMCE T P ++ + +G P
Sbjct: 1281 KSIGDTYSIRIVRTSPEDAGTYMCEA-TNPSGKASKNFDIGIKGEAP 1326
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 596 GDVWALVIKSVKPSDAGLYMC 658
GD + LVIK P D G Y C
Sbjct: 995 GDTYELVIKKSTPEDTGTYTC 1015
>SB_47306| Best HMM Match : I-set (HMM E-Value=0)
Length = 1260
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +2
Query: 590 KGGDVWALVIKSVKPSDAGLYMC-ELNTEPPVRSFHRLTVISRGLTP-PENRNITDTYSA 763
+G +++L+I V+PSD+G+Y C N V S L +++ G +P PE + +T A
Sbjct: 67 EGEGMFSLLIDDVQPSDSGMYECVAFNNAGEVSSKAEL-IVNDGASPVPEEKIQEETAPA 125
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 599 DVWALVIKSVKPSDAGLYMC-ELNTEPPVRSFHRLTVISRGLTPPE 733
+V++LVI V+P DAG Y C N + V + L++ T PE
Sbjct: 604 EVFSLVIDDVQPEDAGKYKCIAFNEKGEVEAEANLSIKEETETAPE 649
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 584 IKKGGDVWALVIKSVKPSDAGLYMCELNTE 673
I+ GD +L I S K DAG Y CE + +
Sbjct: 377 IRSRGDTHSLAIISAKLEDAGEYRCEAHNK 406
>SB_21023| Best HMM Match : I-set (HMM E-Value=2e-07)
Length = 175
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 386 PGGGVTVKSGEDALLTCVVLGARGRPVFWRRA 481
P TV++GE LTC V G VFW +A
Sbjct: 39 PIQNTTVRAGETITLTCAVAGNPTPSVFWSKA 70
>SB_53605| Best HMM Match : Ribosomal_L36 (HMM E-Value=1.5)
Length = 251
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -2
Query: 426 KASSPLFTVTPPPGARIQASLGSTSS*ELSVDVLVFSTEV 307
KA++ FT P G I++ L TSS +LS + L+F+ E+
Sbjct: 27 KAANNQFTSGGPDGNLIRSKLSVTSSKKLSKNTLLFNFEI 66
>SB_10900| Best HMM Match : I-set (HMM E-Value=0)
Length = 1642
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 608 ALVIKSVKPSDAGLYMCEL-NTEPPVRSFHRLTVISRGLTP 727
+LVI VK +D G Y C + N+ ++F +LTV+ P
Sbjct: 172 SLVISDVKKADTGYYTCIVSNSFGSAKAFAQLTVLDAPAAP 212
>SB_20844| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 2675
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 617 IKSVKPSDAGLYMCE 661
IKSV PSDAGLY C+
Sbjct: 836 IKSVLPSDAGLYECQ 850
>SB_59380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1226
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 314 VENTSTSTDSSQEDVEPKEAWMRAPGGGVTVKSGEDALLTCVVLGARGRPVFWRR 478
+ ++T+T + Q+ K+ +V SGE+A+L C+ G V W++
Sbjct: 263 IRRSNTATLTVQQAKSSKQPNFTTIPSNTSVISGEEAVLECIATGVPVPTVQWKK 317
>SB_46235| Best HMM Match : I-set (HMM E-Value=7.6)
Length = 66
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 602 VWALVIKSVKPSDAGLYMCEL--NTEPPVRSFHRLTV 706
V LVIK+V +DAG Y CE+ N P ++ LTV
Sbjct: 28 VATLVIKNVTETDAGNYSCEISVNVGNPKIAYISLTV 64
>SB_42560| Best HMM Match : ig (HMM E-Value=2.4e-06)
Length = 360
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 611 LVIKSVKPSDAGLYMCELNTE---PPVRSFHRLTVISRGLTPPENRNITDTYSAY 766
L+I+ +KPSD G Y C + ++S+ + PP R +T T++ +
Sbjct: 105 LIIRDIKPSDEGCYSCYAPRDGGLKLIKSWKLFVEREKVKPPPVLRRVTRTHNKH 159
>SB_58669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3038
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 334 YGQLSRRCRAQRSLDASSGRRRNSKEWRRCLINLRGTWS*RTSSLLEESQRPPV 495
YG++ ++ + RS + + RR L++ S +SSL S RPPV
Sbjct: 2944 YGEIEKKLASPRSYQLVTENGSEIRRNRRALVHEPVATSGESSSLPSPSNRPPV 2997
>SB_57835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 334 YGQLSRRCRAQRSLDASSGRRRNSKEWRRCLINLRGTWS*RTSSLLEESQRPPV 495
YG++ ++ + RS + + RR L++ S +SSL S RPPV
Sbjct: 1162 YGEIEKKLASPRSYQLVTENGSGIRRNRRALVHEPVATSGESSSLPSPSNRPPV 1215
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 334 YGQLSRRCRAQRSLDASSGRRRNSKEWRRCLINLRGTWS*RTSSLLEESQRPPV 495
YG++ ++ + RS + + RR L++ S +SSL S RPPV
Sbjct: 454 YGEIEKKLASPRSYQLVTENGSGIRRNRRALVHEPVATSGESSSLPSPSNRPPV 507
>SB_11883| Best HMM Match : I-set (HMM E-Value=0)
Length = 616
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +2
Query: 611 LVIKSVKPSDAGLYMCELNTEPPVRSFHRLTVISRGLTPPENR----NITDTYS-AYTPT 775
L + ++ PSD+GLY CE V + G +PP R NIT+T + AY T
Sbjct: 472 LTLPTLSPSDSGLYRCEARNLKGVDDADSYLTVLVG-SPPSIRTTSENITETENIAYIVT 530
>SB_4361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 334 YGQLSRRCRAQRSLDASSGRRRNSKEWRRCLINLRGTWS*RTSSLLEESQRPPV 495
YG++ ++ + RS + + RR L++ S +SSL S RPPV
Sbjct: 688 YGEIEKKLASPRSYQLVTENGSEIRRNRRALVHEPVATSGESSSLPSPSNRPPV 741
>SB_3041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 939
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 334 YGQLSRRCRAQRSLDASSGRRRNSKEWRRCLINLRGTWS*RTSSLLEESQRPPV 495
YG++ ++ + RS + + RR L++ S +SSL S RPPV
Sbjct: 845 YGEIEKKLASPRSYQLVTENGSGIRRNRRALVHEPVATSGESSSLPSPSNRPPV 898
>SB_46816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1165
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 334 YGQLSRRCRAQRSLDASSGRRRNSKEWRRCLINLRGTWS*RTSSLLEESQRPPV 495
YG++ ++ + RS + + RR L++ S +SSL S RPPV
Sbjct: 1071 YGEIEKKLASPRSYQLVTENGSEIRRNRRALVHEPVATSGESSSLPSPSNRPPV 1124
>SB_33828| Best HMM Match : rve (HMM E-Value=3.9e-20)
Length = 298
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 334 YGQLSRRCRAQRSLDASSGRRRNSKEWRRCLINLRGTWS*RTSSLLEESQRPPV 495
YG++ ++ + RS + + RR L++ S +SSL S RPPV
Sbjct: 210 YGEIEKKLASPRSYQLVTENGSGIRRNRRALVHEPVATSGESSSLPSPSNRPPV 263
>SB_33095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 334 YGQLSRRCRAQRSLDASSGRRRNSKEWRRCLINLRGTWS*RTSSLLEESQRPPV 495
YG++ ++ + RS + + RR L++ S +SSL S RPPV
Sbjct: 739 YGEIEKKLASPRSYQLVTENGSEIRRNRRALVHEPVATSGESSSLPSPSNRPPV 792
>SB_24579| Best HMM Match : rve (HMM E-Value=0.085)
Length = 318
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 334 YGQLSRRCRAQRSLDASSGRRRNSKEWRRCLINLRGTWS*RTSSLLEESQRPPV 495
YG++ ++ + RS + + RR L++ S +SSL S RPPV
Sbjct: 146 YGEIEKKLASPRSYQLVTENGSGIRRNRRALVHEPVATSGESSSLPSPSNRPPV 199
>SB_21743| Best HMM Match : rve (HMM E-Value=4e-17)
Length = 865
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 334 YGQLSRRCRAQRSLDASSGRRRNSKEWRRCLINLRGTWS*RTSSLLEESQRPPV 495
YG++ ++ + RS + + RR L++ S +SSL S RPPV
Sbjct: 771 YGEIEKKLASPRSYQLVTENGSEIRRNRRALVHEPVATSGESSSLPSPSNRPPV 824
>SB_8817| Best HMM Match : I-set (HMM E-Value=0)
Length = 2526
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 509 AVRVTRDDRIQVLHDDSEEPLQGPG-IKKGGDVWALVIKSVKPSDAGLYMC 658
AV T ++ DD + + P IK D + L I S PSDAG Y C
Sbjct: 1086 AVSGTPRTEVEWYKDDRKLSNRKPYVIKTTVDDYELTITSASPSDAGTYKC 1136
>SB_5575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 599 DVWALVIKSVKPSDAGLYMCELNTE 673
D AL+IK V+ SD G Y+C E
Sbjct: 9 DSQALIIKDVRYSDRGTYVCSATNE 33
>SB_57810| Best HMM Match : MMR_HSR1 (HMM E-Value=3.6e-07)
Length = 299
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 287 DSTEELKTSVENTSTSTDSSQEDVEPKE 370
DSTEE K ++ + D S+++ +P E
Sbjct: 43 DSTEEKKEKIDESEEDKDESEDEKDPSE 70
>SB_53393| Best HMM Match : RVT_1 (HMM E-Value=5.8e-30)
Length = 1246
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 334 YGQLSRRCRAQRSLDASSGRRRNSKEWRRCLINLRGTWS*RTSSLLEESQRPPV 495
YG++ ++ + RS + + RR L++ S +SSL S RPPV
Sbjct: 1192 YGEIEKKLASPRSYQLVTENGSGIRRNRRVLVHEPVATSGESSSLPSPSNRPPV 1245
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 572 QGPGIKKGGDVWALVIKSVKPSDAGLYMCELNTEPPVRSFHRLTVI 709
+G + + D L + S+K S+AG+Y CE +H +I
Sbjct: 4265 RGDEVVQKADHGTLELPSIKRSEAGMYTCEAANHKGSAEYHYEIII 4310
>SB_9948| Best HMM Match : Autophagy_N (HMM E-Value=4.9)
Length = 166
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 287 DSTEELKTSVENTSTSTDSSQEDVEPKE 370
DSTEE K ++ + D S+++ +P E
Sbjct: 91 DSTEEKKEKIDESEEDKDESEDEKDPSE 118
>SB_8756| Best HMM Match : DUF1168 (HMM E-Value=1)
Length = 346
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 287 DSTEELKTSVENTSTSTDSSQEDVEPKE 370
DSTEE K ++ + D S+++ +P E
Sbjct: 224 DSTEEKKEKIDESEEDKDESEDEKDPSE 251
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,844,665
Number of Sequences: 59808
Number of extensions: 482565
Number of successful extensions: 1658
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1657
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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