Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11c13
(784 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110487-13|CAB54429.2| 268|Caenorhabditis elegans Hypothetical... 45 5e-05
AF456253-1|AAL59611.1| 268|Caenorhabditis elegans secreted 2-im... 45 5e-05
Z81045-4|CAB54202.2| 402|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z81045-3|CAB02817.3| 280|Caenorhabditis elegans Hypothetical pr... 38 0.006
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 32 0.53
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 32 0.53
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 32 0.53
AC025716-7|AAK95888.1| 465|Caenorhabditis elegans Hypothetical ... 30 2.1
U50301-2|AAM29675.1| 362|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical pr... 28 6.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 6.6
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 28 6.6
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 28 8.7
U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1... 28 8.7
U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1... 28 8.7
U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1... 28 8.7
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 28 8.7
AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR... 28 8.7
AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein. 28 8.7
>AL110487-13|CAB54429.2| 268|Caenorhabditis elegans Hypothetical
protein Y39E4B.8 protein.
Length = 268
Score = 45.2 bits (102), Expect = 5e-05
Identities = 30/90 (33%), Positives = 40/90 (44%)
Frame = +2
Query: 398 VTVKSGEDALLTCVVLGARGRPVFWRRARDLQLLTAGAVRVTRDDRIQVLHDDSEEPLQG 577
V V + A L C V + W R D LLTAG TRD R QV
Sbjct: 45 VNVVAENPAYLHCSVPPDAEHEIAWTRVSDGALLTAGNRTFTRDPRWQVS---------- 94
Query: 578 PGIKKGGDVWALVIKSVKPSDAGLYMCELN 667
KK ++W L ++ + D+G Y+CE+N
Sbjct: 95 ---KKSANIWVLNLRRAEQQDSGCYLCEIN 121
>AF456253-1|AAL59611.1| 268|Caenorhabditis elegans secreted
2-immunoglobulin-domainprotein ZIG-8 protein.
Length = 268
Score = 45.2 bits (102), Expect = 5e-05
Identities = 30/90 (33%), Positives = 40/90 (44%)
Frame = +2
Query: 398 VTVKSGEDALLTCVVLGARGRPVFWRRARDLQLLTAGAVRVTRDDRIQVLHDDSEEPLQG 577
V V + A L C V + W R D LLTAG TRD R QV
Sbjct: 45 VNVVAENPAYLHCSVPPDAEHEIAWTRVSDGALLTAGNRTFTRDPRWQVS---------- 94
Query: 578 PGIKKGGDVWALVIKSVKPSDAGLYMCELN 667
KK ++W L ++ + D+G Y+CE+N
Sbjct: 95 ---KKSANIWVLNLRRAEQQDSGCYLCEIN 121
>Z81045-4|CAB54202.2| 402|Caenorhabditis elegans Hypothetical
protein C36F7.4b protein.
Length = 402
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 605 WALVIKSVKPSDAGLYMCELNTEPPVRSFHRLTV 706
W L IK+V+ SD G Y C++NTEP S L V
Sbjct: 154 WVLTIKNVQESDRGNYSCQINTEPITLSTGELDV 187
>Z81045-3|CAB02817.3| 280|Caenorhabditis elegans Hypothetical
protein C36F7.4a protein.
Length = 280
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 605 WALVIKSVKPSDAGLYMCELNTEPPVRSFHRLTV 706
W L IK+V+ SD G Y C++NTEP S L V
Sbjct: 64 WVLTIKNVQESDRGNYSCQINTEPITLSTGELDV 97
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 31.9 bits (69), Expect = 0.53
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +2
Query: 458 RPVFWRRARDLQLLTAGAV----RVTRDDRIQVLHDDSEEPLQGPGIKKGGDVWALVIKS 625
+P F + +D+ + AV RVT D + Q+ EP+ D L I+
Sbjct: 226 KPKFEQEPKDMTVDVGAAVLFDCRVTGDPQPQITWKRKNEPMPVTRAYIAKDNRGLRIER 285
Query: 626 VKPSDAGLYMC 658
V+PSD G Y+C
Sbjct: 286 VQPSDEGEYVC 296
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 31.9 bits (69), Expect = 0.53
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +2
Query: 458 RPVFWRRARDLQLLTAGAV----RVTRDDRIQVLHDDSEEPLQGPGIKKGGDVWALVIKS 625
+P F + +D+ + AV RVT D + Q+ EP+ D L I+
Sbjct: 226 KPKFEQEPKDMTVDVGAAVLFDCRVTGDPQPQITWKRKNEPMPVTRAYIAKDNRGLRIER 285
Query: 626 VKPSDAGLYMC 658
V+PSD G Y+C
Sbjct: 286 VQPSDEGEYVC 296
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 31.9 bits (69), Expect = 0.53
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +2
Query: 458 RPVFWRRARDLQLLTAGAV----RVTRDDRIQVLHDDSEEPLQGPGIKKGGDVWALVIKS 625
+P F + +D+ + AV RVT D + Q+ EP+ D L I+
Sbjct: 226 KPKFEQEPKDMTVDVGAAVLFDCRVTGDPQPQITWKRKNEPMPVTRAYIAKDNRGLRIER 285
Query: 626 VKPSDAGLYMC 658
V+PSD G Y+C
Sbjct: 286 VQPSDEGEYVC 296
>AC025716-7|AAK95888.1| 465|Caenorhabditis elegans Hypothetical
protein Y39G10AR.21 protein.
Length = 465
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 293 TEELKTSVENTSTSTDSSQEDVEPKEAWMRAPGG 394
T+++K + N STST++ ED EP EA R+ G
Sbjct: 123 TQKVKHEISNPSTSTNT--EDSEPDEAIFRSAAG 154
>U50301-2|AAM29675.1| 362|Caenorhabditis elegans Hypothetical
protein F20D6.5 protein.
Length = 362
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 133 DFKEELLTSLNINIPHATLKNISSILGPKFFTKDENDMEL-GAFGAFCH 276
++K +L L + T+K + +L P+ F K ND +L G CH
Sbjct: 185 NWKGDLSDWLPSKVARDTIKELDGLLTPEIFLKLNNDCQLTGVQEVLCH 233
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 557 SEEPLQGPGIKKGG--DVWALVIKSVKPSDAGLYMCELNTE--PPVRSFHRLTVISRGLT 724
S E + G G+ G D L I S + DAG Y+C + E PPV++ ++ T
Sbjct: 1639 SFERVDGKGLPFGSSDDRGVLTIPSTQLQDAGEYVCLYSPENSPPVKTNPSTLNVTPEGT 1698
Query: 725 PP 730
PP
Sbjct: 1699 PP 1700
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 557 SEEPLQGPGIKKGG--DVWALVIKSVKPSDAGLYMCELNTE--PPVRSFHRLTVISRGLT 724
S E + G G+ G D L I S + DAG Y+C + E PPV++ ++ T
Sbjct: 1732 SFERVDGKGLPFGSSDDRGVLTIPSTQLQDAGEYVCLYSPENSPPVKTNPSTLNVTPEGT 1791
Query: 725 PP 730
PP
Sbjct: 1792 PP 1793
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 557 SEEPLQGPGIKKGG--DVWALVIKSVKPSDAGLYMCELNTE--PPVRSFHRLTVISRGLT 724
S E + G G+ G D L I S + DAG Y+C + E PPV++ ++ T
Sbjct: 1732 SFERVDGKGLPFGSSDDRGVLTIPSTQLQDAGEYVCLYSPENSPPVKTNPSTLNVTPEGT 1791
Query: 725 PP 730
PP
Sbjct: 1792 PP 1793
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 557 SEEPLQGPGIKKGG--DVWALVIKSVKPSDAGLYMCELNTE--PPVRSFHRLTVISRGLT 724
S E + G G+ G D L I S + DAG Y+C + E PPV++ ++ T
Sbjct: 1639 SFERVDGKGLPFGSSDDRGVLTIPSTQLQDAGEYVCLYSPENSPPVKTNPSTLNVTPEGT 1698
Query: 725 PP 730
PP
Sbjct: 1699 PP 1700
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 557 SEEPLQGPGIKKGG--DVWALVIKSVKPSDAGLYMCELNTE--PPVRSFHRLTVISRGLT 724
S E + G G+ G D L I S + DAG Y+C + E PPV++ ++ T
Sbjct: 1732 SFERVDGKGLPFGSSDDRGVLTIPSTQLQDAGEYVCLYSPENSPPVKTNPSTLNVTPEGT 1791
Query: 725 PP 730
PP
Sbjct: 1792 PP 1793
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 557 SEEPLQGPGIKKGG--DVWALVIKSVKPSDAGLYMCELNTE--PPVRSFHRLTVISRGLT 724
S E + G G+ G D L I S + DAG Y+C + E PPV++ ++ T
Sbjct: 1732 SFERVDGKGLPFGSSDDRGVLTIPSTQLQDAGEYVCLYSPENSPPVKTNPSTLNVTPEGT 1791
Query: 725 PP 730
PP
Sbjct: 1792 PP 1793
>Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical
protein E01B7.1 protein.
Length = 410
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 510 APAVNNWRSLALLQKTGRPLAPSTTQVNKASSPLFTVTPP 391
APA+N ++ + T RP+ P + + +PL V PP
Sbjct: 347 APALNRQSTIPPVAMTQRPMIPPSLPSSTPPAPLKPVAPP 386
>Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical
protein K04D7.4 protein.
Length = 1159
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 605 WALVIKSVKPSDAGLYMCELNTEP 676
+ L + V P D+G Y C L T+P
Sbjct: 98 YTLRVSPVTPEDSGTYRCRLETDP 121
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 6.6
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +1
Query: 391 RRRNSKEWRRCLINLRGTWS*RTSSLLEESQRPPVINS-----WSCKSHKRRQ-NTGAS* 552
+ + +KE RR G S R + LE ++RP I+S S +S +RRQ N +
Sbjct: 746 KSKKNKEKRRD--QQHGERSSRETERLENNERPNRISSANSGVQSNRSSERRQGNNNSRR 803
Query: 553 *L*RAAPRSRNQEGRRR 603
APRSRN GR++
Sbjct: 804 RGSHGAPRSRNSNGRQQ 820
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 557 SEEPLQGPGIKKGG--DVWALVIKSVKPSDAGLYMCELNTE--PPVRSFHRLTVISRGLT 724
S E + G G+ G D L I S + DAG Y+C + E PPV++ ++ T
Sbjct: 1731 SFERVDGKGLPFGSSDDRGVLTIPSTQLQDAGEYVCLYSPENSPPVKTNPSTLNVTPEGT 1790
Query: 725 PP 730
PP
Sbjct: 1791 PP 1792
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical
protein C09D8.1a protein.
Length = 2180
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +2
Query: 413 GEDALLTCVVLGARGRPVFWRRARDLQLLTAGAVRVTRDDRIQVLHDDSEEPLQGPGIKK 592
G + LTCV +G VFW++ DL +L + + + + H +S E +
Sbjct: 265 GGNINLTCVAVGYPMPRVFWKKT-DLMVLDDPSTAPIGKNVLTLTHVESTENFTCVAVSA 323
Query: 593 GGDVWA---LVIKSVKPSDAGLYMCELNTEPPV 682
G++ A ++ K + P + + + +E V
Sbjct: 324 LGNIEATTTVIAKELPPPPVNIVVSSVTSESVV 356
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical
protein C09D8.1a protein.
Length = 2180
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +2
Query: 413 GEDALLTCVVLGARGRPVFWRRARDLQLLTAGAVRVTRDDRIQVLHDDSEEPLQGPGIKK 592
G + LTCV +G VFW++ DL +L + + + + H +S E +
Sbjct: 265 GGNINLTCVAVGYPMPRVFWKKT-DLMVLDDPSTAPIGKNVLTLTHVESTENFTCVAVSA 323
Query: 593 GGDVWA---LVIKSVKPSDAGLYMCELNTEPPV 682
G++ A ++ K + P + + + +E V
Sbjct: 324 LGNIEATTTVIAKELPPPPVNIVVSSVTSESVV 356
>U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1,
isoform c protein.
Length = 942
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 605 WALVIKSVKPSDAGLYMCEL 664
W L IK+ + SD+G YMC +
Sbjct: 238 WELEIKNAQTSDSGSYMCRV 257
>U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1,
isoform a protein.
Length = 1409
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 605 WALVIKSVKPSDAGLYMCEL 664
W L IK+ + SD+G YMC +
Sbjct: 238 WELEIKNAQTSDSGSYMCRV 257
>U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1,
isoform b protein.
Length = 1444
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 605 WALVIKSVKPSDAGLYMCEL 664
W L IK+ + SD+G YMC +
Sbjct: 238 WELEIKNAQTSDSGSYMCRV 257
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +2
Query: 413 GEDALLTCVVLGARGRPVFWRRARDLQLLTAGAVRVTRDDRIQVLHDDSEEPLQGPGIKK 592
G + LTCV +G VFW++ DL +L + + + + H +S E +
Sbjct: 265 GGNINLTCVAVGYPMPRVFWKKT-DLMVLDDPSTAPIGKNVLTLTHVESTENFTCVAVSA 323
Query: 593 GGDVWA---LVIKSVKPSDAGLYMCELNTEPPV 682
G++ A ++ K + P + + + +E V
Sbjct: 324 LGNIEATTTVIAKELPPPPVNIVVSSVTSESVV 356
>AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR-1
protein.
Length = 942
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 605 WALVIKSVKPSDAGLYMCEL 664
W L IK+ + SD+G YMC +
Sbjct: 238 WELEIKNAQTSDSGSYMCRV 257
>AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein.
Length = 1409
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 605 WALVIKSVKPSDAGLYMCEL 664
W L IK+ + SD+G YMC +
Sbjct: 238 WELEIKNAQTSDSGSYMCRV 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,293,284
Number of Sequences: 27780
Number of extensions: 350942
Number of successful extensions: 1284
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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