Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11c10
(725 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.) 170 1e-42
SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.) 168 3e-42
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 139 2e-33
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 6e-22
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 1e-20
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06) 65 5e-11
SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 50 3e-06
SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_28131| Best HMM Match : Peptidase_C1 (HMM E-Value=1.2e-40) 40 0.002
SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.058
SB_33866| Best HMM Match : NOGCT (HMM E-Value=6.8) 35 0.077
SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_40986| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_56676| Best HMM Match : Peptidase_C1 (HMM E-Value=0.0027) 32 0.41
SB_49235| Best HMM Match : Peptidase_C1 (HMM E-Value=7.5e-07) 32 0.54
SB_51097| Best HMM Match : Peptidase_C1 (HMM E-Value=9.3e-07) 32 0.54
SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40) 31 1.3
SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39) 30 2.2
SB_59668| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_54948| Best HMM Match : PAN (HMM E-Value=0.0035) 29 3.8
SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_6295| Best HMM Match : WSC (HMM E-Value=3.8e-10) 28 8.9
SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041) 28 8.9
SB_17484| Best HMM Match : Pox_A32 (HMM E-Value=0.025) 28 8.9
>SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 170 bits (413), Expect = 1e-42
Identities = 85/168 (50%), Positives = 110/168 (65%)
Frame = +1
Query: 220 WSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHE 399
W A+K H Y ++ E+ R I+ + I HN+ G S+KL MN GDM E
Sbjct: 29 WKAWKSFHGKEYPNKNEETMRNFIWQNNLKKIVTHNE----GKHSFKLAMNHLGDMTSLE 84
Query: 400 FVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQGKCG 579
+T+ G K KH ++ +GA F+ PANVK+ + +DWR G VT +K+QG+CG
Sbjct: 85 ISQTLLGL-KLKKHAES------QPKGATFLPPANVKVVDSIDWRSKGYVTPVKNQGQCG 137
Query: 580 SCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLMD 723
SCW+FSTTGALEGQHFR++G LVSLSEQNL+DCS +YGNNGC GGLMD
Sbjct: 138 SCWAFSTTGALEGQHFRKTGKLVSLSEQNLVDCSGKYGNNGCEGGLMD 185
>SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 521
Score = 168 bits (409), Expect = 3e-42
Identities = 83/175 (47%), Positives = 112/175 (64%)
Frame = +1
Query: 199 FDLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKY 378
FD +++W A+KL H Y + E+ R I+ ++ I KHN + S+ L MN
Sbjct: 240 FDEDEQQWQAWKLFHTKKYTTVTEEGARKAIWRDNLKKIQKHNAEGH----SFTLAMNHL 295
Query: 379 GDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDI 558
GD+ EF G H N K GS F++P++V++P+ VDWRK G VT +
Sbjct: 296 GDLTQDEFRYFYTGMRS---HYSNYTKKQGSA----FLAPSHVQVPDTVDWRKEGYVTPV 348
Query: 559 KDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLMD 723
K+QG+CGSCW+FSTTG+LEGQ+F+++G LVSLSEQNL+DCS YGNNGC GGLMD
Sbjct: 349 KNQGQCGSCWAFSTTGSLEGQNFKKTGKLVSLSEQNLVDCSTAYGNNGCQGGLMD 403
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 139 bits (337), Expect = 2e-33
Identities = 68/121 (56%), Positives = 83/121 (68%)
Frame = +1
Query: 361 LGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKH 540
+ MN GD+ EF G A HN K G A ++ P+NVK+P VDW +
Sbjct: 1 MAMNHLGDLTEDEFRYFYLGVR--AHHNST---KRG---WATYMPPSNVKIPSSVDWSQK 52
Query: 541 GAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLM 720
G VT +K+QG+CGSCW+FSTTG++EGQHFR++G LVSLSEQNLIDCS YGNNGC GGLM
Sbjct: 53 GYVTGVKNQGQCGSCWAFSTTGSVEGQHFRKTGSLVSLSEQNLIDCSGSYGNNGCQGGLM 112
Query: 721 D 723
D
Sbjct: 113 D 113
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 103 bits (248), Expect = 1e-22
Identities = 58/159 (36%), Positives = 86/159 (54%)
Frame = +1
Query: 238 QHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMN 417
+H+ NY+ E + R + + + I N+++ Y L MN GD E ++ +
Sbjct: 562 KHKKNYKDNKEHHTRREHFKHNLRFIHSKNRRH----AGYYLAMNHLGDRSDKE-LRVLR 616
Query: 418 GFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQGKCGSCWSFS 597
G T +N L K ++ N +P++++W GAVT +KDQ CGSCWSF
Sbjct: 617 GRRYTKGYNGGLPYKPD-------MASIN-DVPDEMNWVIRGAVTPVKDQAVCGSCWSFG 668
Query: 598 TTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGG 714
TTG +EG F ++ YL LS+QNL+DCS GNN C+GG
Sbjct: 669 TTGTIEGTLFLKTKYLTRLSQQNLMDCSWGEGNNACDGG 707
>SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 101 bits (242), Expect = 6e-22
Identities = 41/53 (77%), Positives = 50/53 (94%)
Frame = +1
Query: 565 QGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLMD 723
Q +CGSCW+FS+TG+LEGQHFR++G LVSLSEQNL+DCS++YGNNGC GGLMD
Sbjct: 342 QCQCGSCWAFSSTGSLEGQHFRKTGKLVSLSEQNLVDCSKKYGNNGCEGGLMD 394
Score = 64.9 bits (151), Expect = 6e-11
Identities = 41/119 (34%), Positives = 60/119 (50%)
Frame = +1
Query: 217 EWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHH 396
+W A+K H Y E ED R I+ ++ I+ KHN + SYKL MN + D+
Sbjct: 180 QWHAWKDFHGKTYTGEEED-LRRAIWNDNLEIVKKHNAENH----SYKLDMNHFADLTVT 234
Query: 397 EFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQGK 573
EF + G+ + S G+ F+ +NV+LP +VDWR G VT +K+Q K
Sbjct: 235 EFKQRFMGYRAASN----------STGGSTFLPLSNVQLPAEVDWRDKGFVTAVKNQEK 283
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 97.1 bits (231), Expect = 1e-20
Identities = 40/70 (57%), Positives = 50/70 (71%)
Frame = +1
Query: 505 VKLPEQVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSE 684
V LP VDWRK GAV +K QG CGSC++F+ GALEG HF Q+G + LSEQ ++DC+
Sbjct: 497 VPLPPHVDWRKAGAVNSVKSQGICGSCYAFAVAGALEGAHFIQTGLKLDLSEQQIVDCTW 556
Query: 685 QYGNNGCNGG 714
+GN GC GG
Sbjct: 557 GFGNRGCKGG 566
Score = 35.5 bits (78), Expect = 0.044
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = +1
Query: 202 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 381
DLV +++ F+ QH YE + E R I+ + I N++ + YKL N +
Sbjct: 1188 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRR----SLPYKLEPNHFA 1243
Query: 382 DMLHHEFVKTMNGFNKTAKHNKN 450
D+ EF + + +K N
Sbjct: 1244 DLTDDEFKSYKDALDDESKDVMN 1266
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 415 NGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTD 555
N NK +H K ++ K K S ++P+Q+DWR +G TD
Sbjct: 1386 NRKNKKKEHKKRMHAK-------KKRSKRMFEVPDQLDWRNYGNKTD 1425
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 69.7 bits (163), Expect = 2e-12
Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Frame = +1
Query: 436 KHNKNLYMKGGSVRGAKF-ISPANVKLPEQVDWRKH-GAVTDIKDQGKCGSCWSFSTTGA 609
+HN Y++ + + K+ ++P + ++ +H GAV+ ++ QG CGSC++ + GA
Sbjct: 286 RHNMR-YIRSINRKNLKYKLAPNHFVDLTDGEYDQHKGAVSPVRGQGICGSCYALAAVGA 344
Query: 610 LEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGG 714
+EG +F ++G L LS Q +IDCS GN GC GG
Sbjct: 345 VEGAYFMKTGKLKELSAQQVIDCSWGSGNRGCKGG 379
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 208 VKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDM 387
++ + ++ QH Y+SE E + R I+ + I N+K + YKL N + D+
Sbjct: 257 IERMYRKYQGQHNKQYDSEHEVSKRKHIFRHNMRYIRSINRKN----LKYKLAPNHFVDL 312
Query: 388 LHHEF 402
E+
Sbjct: 313 TDGEY 317
>SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06)
Length = 385
Score = 65.3 bits (152), Expect = 5e-11
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Frame = +1
Query: 202 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 381
D V +++ F+ QH YE + E R I+ + I N++ + YKL +N +
Sbjct: 38 DPVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRRS----LPYKLELNHFP 93
Query: 382 DMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPE-QVDWRKHGAVTDI 558
D+ EF + +K N + N + E + D GAV
Sbjct: 94 DLTDDEFKSYKGALDDESKDVMNDH-------DDVIDDDVNDETQEDEEDEPSDGAVNPA 146
Query: 559 KDQGKCGSCWSFSTTGALEGQHFRQSGY 642
K QG CGSCW+F+T GA+E HF Q G+
Sbjct: 147 KGQGTCGSCWAFATAGAVEAAHFIQEGF 174
>SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 298
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 529 WRKHGAVTDIKDQGKCGSCWSFSTTGALEGQH--FRQSGYLVSLSEQNLIDCSEQYGNNG 702
W + +++DQG CGSCW+F A+ ++ + + +S ++L+ C E G G
Sbjct: 95 WPHCPTIKEVRDQGACGSCWAFGAVEAMSDRYCIHSEGKVMPHISAEDLLSCCETCG-MG 153
Query: 703 CNGG 714
CNGG
Sbjct: 154 CNGG 157
>SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = +1
Query: 367 MNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGA 546
MN++ DM EF + A + RGA F++P N++LP +VDWR+ G
Sbjct: 1 MNEFADMCEEEFRNVYLRYRFNASSPQ---------RGATFMAPNNLELPTKVDWRQQGY 51
Query: 547 VTDIKDQGK 573
VT +K+QGK
Sbjct: 52 VTPVKNQGK 60
>SB_28131| Best HMM Match : Peptidase_C1 (HMM E-Value=1.2e-40)
Length = 295
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1
Query: 634 SGYLVSLSEQNLIDCSEQYGNNGCNGG 714
+G L SEQ L+DCS +GNNGC GG
Sbjct: 52 TGKLKDFSEQQLLDCSWGFGNNGCRGG 78
>SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 35.1 bits (77), Expect = 0.058
Identities = 22/83 (26%), Positives = 36/83 (43%)
Frame = +1
Query: 202 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 381
DLV +++ F+ QH YE + E R I+ + I N++ + YKL N +
Sbjct: 38 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRR----SLPYKLEPNHFA 93
Query: 382 DMLHHEFVKTMNGFNKTAKHNKN 450
D+ EF + +K N
Sbjct: 94 DLTDDEFKSYKGALDDESKDVMN 116
>SB_33866| Best HMM Match : NOGCT (HMM E-Value=6.8)
Length = 234
Score = 34.7 bits (76), Expect = 0.077
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 202 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 381
DLV +++ F+ QH YE + E R I+ + I ++ + YKL N +G
Sbjct: 38 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMKRR----SLPYKLEPNHFG 93
Query: 382 DMLHHEF 402
D+ EF
Sbjct: 94 DLTDDEF 100
>SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 5/35 (14%)
Frame = +1
Query: 625 FRQSGYLVSLSEQNLIDCS----EQY-GNNGCNGG 714
F + G L++L+EQ L+DC+ E Y GNNGC GG
Sbjct: 33 FVKKGELLNLAEQQLLDCTWSTPEVYHGNNGCLGG 67
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
Frame = +1
Query: 625 FRQSGYLVSLSEQNLIDCSEQ-----YGNNGCNGG 714
F + G L++L+EQ L+DC+ +GNNGC GG
Sbjct: 182 FVKKGELLNLAEQQLLDCTWSTPGVYHGNNGCLGG 216
>SB_40986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
Frame = +1
Query: 625 FRQSGYLVSLSEQNLIDCSEQ-----YGNNGCNGG 714
F + G L++L+EQ L+DC+ +GNNGC GG
Sbjct: 58 FVKKGELLNLAEQQLLDCTWSTPGVYHGNNGCLGG 92
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 33.1 bits (72), Expect = 0.24
Identities = 22/83 (26%), Positives = 35/83 (42%)
Frame = +1
Query: 202 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 381
DLV +++ F+ QH YE + E R I+ + I N+ + YKL N +
Sbjct: 209 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNR----CSLPYKLEPNHFA 264
Query: 382 DMLHHEFVKTMNGFNKTAKHNKN 450
D+ EF + +K N
Sbjct: 265 DLTDDEFKSYKGALDDESKDVMN 287
>SB_56676| Best HMM Match : Peptidase_C1 (HMM E-Value=0.0027)
Length = 295
Score = 32.3 bits (70), Expect = 0.41
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 382 DMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRK-HGA--VT 552
D +H +K+ NG K++K + + R ++++ A KLP DWR +G +
Sbjct: 12 DKIHQ--MKSSNGGCYDRKYDKGIKPVIKTKRPHEYLNMA--KLPTSFDWRDVNGTNYAS 67
Query: 553 DIKDQG---KCGSCWSFSTTGAL 612
++Q CGSCW+ TT A+
Sbjct: 68 TTRNQHIPQYCGSCWAHGTTSAM 90
>SB_49235| Best HMM Match : Peptidase_C1 (HMM E-Value=7.5e-07)
Length = 122
Score = 31.9 bits (69), Expect = 0.54
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 5/31 (16%)
Frame = +1
Query: 637 GYLVSLSEQNLIDCSEQ-----YGNNGCNGG 714
G L++L+EQ L+DC+ +GNNGC GG
Sbjct: 2 GELLNLAEQQLLDCTWSTPGVYHGNNGCLGG 32
>SB_51097| Best HMM Match : Peptidase_C1 (HMM E-Value=9.3e-07)
Length = 122
Score = 31.9 bits (69), Expect = 0.54
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 5/31 (16%)
Frame = +1
Query: 637 GYLVSLSEQNLIDCSEQ-----YGNNGCNGG 714
G L++L+EQ L+DC+ +GNNGC GG
Sbjct: 2 GELLNLAEQQLLDCTWSTPGVYHGNNGCLGG 32
>SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40)
Length = 251
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +1
Query: 538 HGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQ-----YGNNG 702
H TD + + T F + L++L+EQ L+DC+ +GNNG
Sbjct: 10 HNKNTDDNNNNNNNNIHHNKNTDDNNNNSFVKKCELLNLAEQQLLDCTWSTPGVYHGNNG 69
Query: 703 CNGG 714
C GG
Sbjct: 70 CLGG 73
>SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39)
Length = 1024
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 577 GSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCN 708
G WS STTGA GQH LV ++ + + G C+
Sbjct: 610 GKAWSASTTGARLGQHQPPGQGLVGINHRGKAWSASTTGGKACS 653
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 577 GSCWSFSTTGALEGQHFRQSGYLVSLSEQ 663
G WS STTGA GQH LVS++ +
Sbjct: 523 GKAWSASTTGARLGQHQPPGQGLVSINHR 551
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 577 GSCWSFSTTGALEGQHFRQSGYLVSLSEQ 663
G WS STTGA GQH LVS++ +
Sbjct: 552 GKAWSASTTGARLGQHQPLGQGLVSINHR 580
>SB_59668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 623
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 577 GSCWSFSTTGALEGQHFRQSGYLVSLSEQ 663
G WS STTGA GQH LVS++ +
Sbjct: 83 GKAWSASTTGARLGQHQPPGQGLVSINHR 111
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 577 GSCWSFSTTGALEGQHFRQSGYLVSLSEQ 663
G WS STTGA GQH LVS++ +
Sbjct: 25 GKAWSASTTGARLGQHQPLGQGLVSINHR 53
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 577 GSCWSFSTTGALEGQHFRQSGYLVSLS 657
G WS STTGA GQH LVS++
Sbjct: 112 GKAWSASTTGARLGQHQPPGQGLVSIN 138
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 577 GSCWSFSTTGALEGQHFRQSGYLVSLS 657
G WS STTGA GQH LVS++
Sbjct: 141 GKAWSASTTGARLGQHQPPGQGLVSIN 167
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 577 GSCWSFSTTGALEGQHFRQSGYLVSLS 657
G WS STTGA GQH LVS++
Sbjct: 54 GKAWSASTTGARLGQHQPLGQGLVSIN 80
>SB_54948| Best HMM Match : PAN (HMM E-Value=0.0035)
Length = 396
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = -2
Query: 460 SCTDSCCVWQFCXXXXXXXRTRGGACLRTCSCPACKKRGPFRTSGCVWR*CACAQRISSC 281
SC++ CC+ Q C GG C+ C P KK T C R C SC
Sbjct: 129 SCSNGCCLGQRC--------LNGGTCVEHCEDPK-KKFSCACTPSCSGRTCESCGTYRSC 179
>SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2982
Score = 28.3 bits (60), Expect = 6.7
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +2
Query: 431 LPNTTRICT*RVGASA-GLSSYRRPT*SCRSRWTGGSTAPSPTSRTKGSVAHAGPSARLE 607
L T+ I T R + A G SS P ++R T PSP RT S G S E
Sbjct: 969 LRRTSSIGTPRKKSFARGHSSVASPIRDKKTRRERSGTRPSPGERTGESSVKTGESRTFE 1028
Query: 608 LW 613
W
Sbjct: 1029 AW 1030
>SB_6295| Best HMM Match : WSC (HMM E-Value=3.8e-10)
Length = 281
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = +1
Query: 277 FRMKIYAEHKHIIAKHNQ---KYEMGLVSYKLGMNKY 378
+RM + A+ + ++AK+ KY MG+ Y++G+ KY
Sbjct: 148 YRMGV-AKCRMVVAKYRMGVAKYRMGVAKYRMGVAKY 183
>SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041)
Length = 942
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/40 (30%), Positives = 14/40 (35%)
Frame = -2
Query: 475 GRSHPSCTDSCCVWQFCXXXXXXXRTRGGACLRTCSCPAC 356
GR CT C+ FC GG C C+ C
Sbjct: 254 GRCWQDCTGGKCLNMFCNSRMCIQSCGGGGCKMRCNALKC 293
>SB_17484| Best HMM Match : Pox_A32 (HMM E-Value=0.025)
Length = 1616
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 185 VLFSSLTWSRKSGVPSSCSTVSTTKARSKTISA*RY 292
VL L+W R + +C TV T R +T+ A Y
Sbjct: 336 VLVEQLSWFRPTSFVETCLTVRTIATRLRTLCAYAY 371
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,764,457
Number of Sequences: 59808
Number of extensions: 463008
Number of successful extensions: 1620
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1580
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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