Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c09
         (785 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5E5K1 Cluster: Putative uncharacterized protein; n=1; ...    34   3.5  
UniRef50_A2DQ50 Cluster: Putative uncharacterized protein; n=1; ...    34   4.6  

>UniRef50_A5E5K1 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 521

 Score = 34.3 bits (75), Expect = 3.5
 Identities = 22/76 (28%), Positives = 41/76 (53%)
 Frame = +1

Query: 394 IQSGQSVLFSSTAEFLLQNMKKFPMEVSLWSKEENLAFIGATFIPWDPMFLSYLEKIYNC 573
           I +G+  +F + AEFL     K P  V +  K+ ++ ++ A+++P  P+F      IY+ 
Sbjct: 302 IFNGKGAMFKNGAEFL-----KLPQVVDVL-KDNSIIYLNASYVPQIPIF------IYHS 349

Query: 574 QEPPPVTLKEEYNVFE 621
              P V +K+ Y V++
Sbjct: 350 SFDPIVPIKDVYTVYD 365


>UniRef50_A2DQ50 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 255

 Score = 33.9 bits (74), Expect = 4.6
 Identities = 21/65 (32%), Positives = 31/65 (47%)
 Frame = -3

Query: 261 CYMHLFRIFEFERKYICKITPNNQMSAFNQTLYTFDDNLE*KHGIANGHFLNTLKWVYTF 82
           CY++   +    R  +CK  P+N +S    TLY F DN      I+N +    L  +Y+F
Sbjct: 137 CYIYSNYLTSLTRTTVCKCAPDNYISD-PDTLYIFYDNFFESCNISNNYM--GLYLIYSF 193

Query: 81  LHYNF 67
              NF
Sbjct: 194 EDINF 198


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,298,238
Number of Sequences: 1657284
Number of extensions: 12928407
Number of successful extensions: 33332
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 32249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33326
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)