Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c09
         (785 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U18937-1|AAA73974.1|  506|Homo sapiens histidyl-tRNA synthetase ...    31   4.7  
BC014982-1|AAH14982.1|  506|Homo sapiens histidyl-tRNA synthetas...    31   4.7  
BC007680-1|AAH07680.1|  506|Homo sapiens histidyl-tRNA synthetas...    31   4.7  

>U18937-1|AAA73974.1|  506|Homo sapiens histidyl-tRNA synthetase
           homologue protein.
          Length = 506

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 561 FFQIRQKHRIPGNESSTNESQIFFFTPKRNF 469
           F+ + Q+ +  G +  T E+Q+F  TP++NF
Sbjct: 391 FYIVEQRMKTKGEKVRTTETQVFVATPQKNF 421


>BC014982-1|AAH14982.1|  506|Homo sapiens histidyl-tRNA synthetase
           2, mitochondrial (putative) protein.
          Length = 506

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 561 FFQIRQKHRIPGNESSTNESQIFFFTPKRNF 469
           F+ + Q+ +  G +  T E+Q+F  TP++NF
Sbjct: 391 FYIVEQRMKTKGEKVRTTETQVFVATPQKNF 421


>BC007680-1|AAH07680.1|  506|Homo sapiens histidyl-tRNA synthetase
           2, mitochondrial (putative) protein.
          Length = 506

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 561 FFQIRQKHRIPGNESSTNESQIFFFTPKRNF 469
           F+ + Q+ +  G +  T E+Q+F  TP++NF
Sbjct: 391 FYIVEQRMKTKGEKVRTTETQVFVATPQKNF 421


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,959,024
Number of Sequences: 237096
Number of extensions: 1950150
Number of successful extensions: 4015
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4015
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)