Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c06
         (423 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   2.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   2.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   3.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.5  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    20   8.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   8.6  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 125 YLELLTIEPF*LTLNIFIASNFFYFF 48
           Y E+  +  F ++   FI S FFYFF
Sbjct: 226 YFEVQVLTIFGVSFYFFI-STFFYFF 250


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 125 YLELLTIEPF*LTLNIFIASNFFYFF 48
           Y E+  +  F ++   FI S FFYFF
Sbjct: 222 YFEVQVLTIFGVSFYFFI-STFFYFF 246


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 9/33 (27%), Positives = 13/33 (39%)
 Frame = +1

Query: 220 NPCAKPACCSNEYWCYTRHRPTSTLQETTTLRR 318
           NPC    C +    C+T   P  T  +   L +
Sbjct: 691 NPCTTCFCENGNNKCFTMECPQVTCPDNMKLEK 723


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 247  SNEYWCYTRHRPTSTLQETTT 309
            ++ +W  T  R T+T + TTT
Sbjct: 1048 TSPWWTTTTTRRTTTTRPTTT 1068


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 220 NPCAKPACCSNEYWCYTRHRP 282
           +PC   A C +    YT H P
Sbjct: 68  SPCLNGATCQDHTTHYTCHCP 88


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 352 LVPILFSYYYCSYILK 399
           LVP LF  Y C  +++
Sbjct: 237 LVPALFVIYLCGRVME 252


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 6/24 (25%), Positives = 13/24 (54%)
 Frame = +1

Query: 325 CLYQWRRNCLVPILFSYYYCSYIL 396
           C+Y +       +   Y+YC++I+
Sbjct: 132 CIYYFVVPLFFLLCIYYFYCAFII 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,882
Number of Sequences: 336
Number of extensions: 1476
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)