Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c05
         (710 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    27   0.77 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   3.1  
EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.        24   4.1  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.4  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    23   7.2  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +3

Query: 195 MDAEDVYAENTWTYLSMCTEPTVYEGLKFAKDILFSNLLLRFTI 326
           +D  D +   TW  + +     VYEG     DI F  ++ R T+
Sbjct: 190 VDLSDYWKSGTWDIIEVPAYLNVYEGNPTETDITFYIIIRRKTL 233


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -2

Query: 169 SFPVFLNFL*VFMKHFM 119
           S P+F+NF+ +F+ HF+
Sbjct: 48  SVPLFINFIFMFLLHFV 64


>EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.
          Length = 421

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 258 LVLYT*IGTSKYFRRKHLLHPS 193
           L+L   IGT + FRR HL H S
Sbjct: 15  LMLLISIGTVQPFRRHHLRHQS 36


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/42 (23%), Positives = 23/42 (54%)
 Frame = +1

Query: 226  LGRTYLCVQNQLCTKD*NLLKIFYFLICYFVLPFSFYHYLIM 351
            L   ++C+ +  C     L+KIF     YF+ P++ + ++++
Sbjct: 1658 LNMIFICIFSSEC-----LMKIFALRYHYFIEPWNLFDFVVV 1694


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -2

Query: 526 RNVIIVNDTNSDLLLLLV 473
           RN+ IVN   SDLLL LV
Sbjct: 76  RNMFIVNLAVSDLLLCLV 93


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,835
Number of Sequences: 2352
Number of extensions: 14446
Number of successful extensions: 55
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)