Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11c05
         (710 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77310-1|AAB18992.1|  525|Drosophila melanogaster porcupine prot...    57   2e-08
AY069578-1|AAL39723.1|  525|Drosophila melanogaster LD31570p pro...    57   2e-08
AE014298-2706|AAF48828.1|  525|Drosophila melanogaster CG6205-PA...    57   2e-08

>U77310-1|AAB18992.1|  525|Drosophila melanogaster porcupine
           protein.
          Length = 525

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 8/166 (4%)
 Frame = +3

Query: 237 LSMCTEPTVYEGLKFAKDILFSNLLLRFTIQFLPLPHNVR-----HSLSLITGVYLLYNN 401
           L  C +P+V + +++   +L   LL R           +      H      G+ +L   
Sbjct: 72  LQSCVQPSVLQVMQYVAPMLLLCLLCRLLCLLYSQRRRLTSLAPLHLFHFACGLIILQIT 131

Query: 402 IGSAIFWTIGLTTGSYTMITVLSWTKSKRRSLFVSFTIITFLLLCEIYVLNPKM-WQQIR 578
           +G  +   + L    Y ++ +L     +R +  ++   +    L E+ +   +  W Q+R
Sbjct: 132 VGYRLLLLLLLAAVGYLLLQLLRL--GRRGAQVLAVLTVGSQFLYELLIWRRRSDWPQLR 189

Query: 579 GIQMIAAMKIISVAIELDRN--IYXNILXPVEYGGYIFCPANCILG 710
           GIQM+  MK+IS+  +L  +  +   I  P  Y GYI+ PA C LG
Sbjct: 190 GIQMVVNMKLISLGFDLTASGQLQARIPGPFAYLGYIYSPATCALG 235


>AY069578-1|AAL39723.1|  525|Drosophila melanogaster LD31570p
           protein.
          Length = 525

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 8/166 (4%)
 Frame = +3

Query: 237 LSMCTEPTVYEGLKFAKDILFSNLLLRFTIQFLPLPHNVR-----HSLSLITGVYLLYNN 401
           L  C +P+V + +++   +L   LL R           +      H      G+ +L   
Sbjct: 72  LQSCVQPSVLQVMQYVAPMLLLCLLCRLLCLLYSQRRRLTSLAPLHLFHFACGLIILQIT 131

Query: 402 IGSAIFWTIGLTTGSYTMITVLSWTKSKRRSLFVSFTIITFLLLCEIYVLNPKM-WQQIR 578
           +G  +   + L    Y ++ +L     +R +  ++   +    L E+ +   +  W Q+R
Sbjct: 132 VGYRLLLLLLLAAVGYLLLQLLRL--GRRGAQVLAVLTVGSQFLYELLIWRRRSDWPQLR 189

Query: 579 GIQMIAAMKIISVAIELDRN--IYXNILXPVEYGGYIFCPANCILG 710
           GIQM+  MK+IS+  +L  +  +   I  P  Y GYI+ PA C LG
Sbjct: 190 GIQMVVNMKLISLGFDLTASGQLQARIPGPFAYLGYIYSPATCALG 235


>AE014298-2706|AAF48828.1|  525|Drosophila melanogaster CG6205-PA
           protein.
          Length = 525

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 8/166 (4%)
 Frame = +3

Query: 237 LSMCTEPTVYEGLKFAKDILFSNLLLRFTIQFLPLPHNVR-----HSLSLITGVYLLYNN 401
           L  C +P+V + +++   +L   LL R           +      H      G+ +L   
Sbjct: 72  LQSCVQPSVLQVMQYVAPMLLLCLLCRLLCLLYSQRRRLTSLAPLHLFHFACGLIILQIT 131

Query: 402 IGSAIFWTIGLTTGSYTMITVLSWTKSKRRSLFVSFTIITFLLLCEIYVLNPKM-WQQIR 578
           +G  +   + L    Y ++ +L     +R +  ++   +    L E+ +   +  W Q+R
Sbjct: 132 VGYRLLLLLLLAAVGYLLLQLLRL--GRRGAQVLAVLTVGSQFLYELLIWRRRSDWPQLR 189

Query: 579 GIQMIAAMKIISVAIELDRN--IYXNILXPVEYGGYIFCPANCILG 710
           GIQM+  MK+IS+  +L  +  +   I  P  Y GYI+ PA C LG
Sbjct: 190 GIQMVVNMKLISLGFDLTASGQLQARIPGPFAYLGYIYSPATCALG 235


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,413,363
Number of Sequences: 53049
Number of extensions: 604857
Number of successful extensions: 1680
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1677
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)