Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11b24
         (540 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   5.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   9.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   9.2  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   9.2  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 311 CSIVQVTTYLYGFCNLV 261
           C++ QV   +YGF N +
Sbjct: 222 CNLCQVANSIYGFQNFL 238


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -2

Query: 89  IYQLIHTNDYYYFFVQIVAFFDFHY 15
           ++ L+ T  +YY F+ ++  + F+Y
Sbjct: 94  VHFLLCTYYFYYAFIILLCVYYFYY 118


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory
          receptor candidate 55 protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 74 HTNDYYYFFVQIVAF 30
          H +DY+YF   I ++
Sbjct: 51 HKSDYFYFSFYITSY 65


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory
          receptor candidate 11 protein.
          Length = 344

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 74 HTNDYYYFFVQIVAF 30
          H +DY+YF   I ++
Sbjct: 51 HKSDYFYFSFYITSY 65


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 402 SFILPTDRA*AISSVIPITRRT 337
           + +LPT  A  +  ++PI +RT
Sbjct: 185 ALVLPTQGASPLPLLVPIPQRT 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,696
Number of Sequences: 336
Number of extensions: 2600
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)