Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11b23
(619 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g11990.1 68418.m01402 proline-rich family protein contains pr... 32 0.35
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 31 0.81
At5g48100.1 68418.m05942 laccase family protein / diphenol oxida... 29 2.5
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 2.5
At3g24480.1 68416.m03070 leucine-rich repeat family protein / ex... 28 5.7
At5g49950.1 68418.m06185 embryogenesis-associated protein-relate... 27 10.0
At5g36050.1 68418.m04343 hypothetical protein includes At2g10370... 27 10.0
At4g19300.1 68417.m02844 hypothetical protein includes At2g10370... 27 10.0
At3g50090.1 68416.m05476 exonuclease family protein contains exo... 27 10.0
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 27 10.0
At1g74460.1 68414.m08626 GDSL-motif lipase/hydrolase family prot... 27 10.0
At1g23540.1 68414.m02960 protein kinase family protein contains ... 27 10.0
>At5g11990.1 68418.m01402 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 181
Score = 31.9 bits (69), Expect = 0.35
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +2
Query: 74 CPPVCSPPDCRP---ICGPASPLLCQSSVPP 157
CP +CSPP +P + P SP L SS PP
Sbjct: 38 CPTICSPPPSKPSPSMSPPPSPSLPLSSSPP 68
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 30.7 bits (66), Expect = 0.81
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +2
Query: 71 YCPPVCSPPDCRPICGPASPLLCQSSVPPTQRCYPVNPCIN 193
YCPP PP C IC P P PPT + P N
Sbjct: 29 YCPP---PPPCICICNPGPPPPQPDPQPPTPPTFQPAPPAN 66
>At5g48100.1 68418.m05942 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661197]
Length = 565
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +3
Query: 96 RIVVRSVDLHLRSFARAACHQHNGAIL*ILASTYTAVTLKLCNAMDDFYSEFKNVLQVSF 275
R ++ +V ++LR + +C NG+ L + + VT + + +Y K V F
Sbjct: 350 RRIITTVSINLRMCPQNSCEGPNGSRLAASMNNISFVTPSHVDILKAYYYHIKGVYGTRF 409
Query: 276 PE 281
PE
Sbjct: 410 PE 411
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = +2
Query: 71 YCPPVCSPP--DCRPICGPASP 130
+CP C C+PICGP SP
Sbjct: 35 FCPDSCHVECASCKPICGPPSP 56
>At3g24480.1 68416.m03070 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 494
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +2
Query: 77 PPVCSPPDCRPICGPASPLLCQSSVPPTQRCYPVNP 184
PPV SPP P+ P P S PP + +P
Sbjct: 431 PPVFSPPPSPPVYSPPPPPSIHYSSPPPPPVHHSSP 466
>At5g49950.1 68418.m06185 embryogenesis-associated protein-related
contains weak similarity to Embryogenesis-associated
protein EMB8 (Swiss-Prot:Q40863) [Picea glauca]
Length = 537
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 175 CKSLHQHIQLLHSNYVTQWTISIVNLKMSYKFLFPKQMGFLFK 303
CK + +LLH Y + +S +L+ ++ LF K F +K
Sbjct: 66 CKFIVSKCRLLHGRYFPTFWLSSPHLQTAFLTLFGKSPPFSYK 108
>At5g36050.1 68418.m04343 hypothetical protein includes At2g10370,
At5g36050, At1g35090, At1g44860, At4g19300, At1g42400,
At3g43040, At3g42500
Length = 252
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 187 HQHIQLLHSNYVTQWTISIVNLKMSYKFLFP 279
H H+ L S VT WTI ++ L++ KFL P
Sbjct: 4 HHHLYEL-SPMVTGWTICVMVLRIYKKFLNP 33
>At4g19300.1 68417.m02844 hypothetical protein includes At2g10370,
At5g36050, At1g35090, At1g44860, At4g19300, At1g42400,
At3g43040, At3g42500
Length = 252
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 187 HQHIQLLHSNYVTQWTISIVNLKMSYKFLFP 279
H H+ L S VT WTI ++ L++ KFL P
Sbjct: 4 HHHLYEL-SPMVTGWTICVMVLRIYKKFLNP 33
>At3g50090.1 68416.m05476 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 322
Score = 27.1 bits (57), Expect = 10.0
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 139 PEQRATNTTVLSCKSLHQHIQLLHSNYVTQWTISIVNLKMSYKFLFPKQM 288
PEQR L+ ++ ++ L +Y W +S V +KMS + P QM
Sbjct: 30 PEQRLVR---LTNENPQYNVDFLFHSYSKDWFVSDVGMKMS-NVMIPNQM 75
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 27.1 bits (57), Expect = 10.0
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +2
Query: 77 PPVCSPPDCRPICGPASPLLCQSSVPPTQRCYPVNPCINIYS 202
PPV SPP PI P P + S PP Y P +YS
Sbjct: 496 PPVHSPPPPSPIHSPPPPPV--YSPPPPPPVYSPPPPPPVYS 535
>At1g74460.1 68414.m08626 GDSL-motif lipase/hydrolase family protein
similar to family II lipases EXL3 GI:15054386, EXL1
GI:15054382, EXL2 GI:15054384 from [Arabidopsis
thaliana]; contains Pfam profile: PF00657
lipase/acylhydrolase with GDSL-like motif
Length = 366
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 601 CYCFVYFIVLLLNHLDLELSQFV 533
C FV FIVL +N D ++ QF+
Sbjct: 4 CAIFVLFIVLAINGYDCKIVQFI 26
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 77 PPVCSPPDCRPICGPASPLLCQSSVPPTQRCYPVNPCI 190
PPV S P P ++P L + S PP P P I
Sbjct: 33 PPVDSSPPSPPADSSSTPPLSEPSTPPPDSQLPPLPSI 70
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,791,275
Number of Sequences: 28952
Number of extensions: 232417
Number of successful extensions: 664
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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