Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11b18
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical pr... 32 0.38
AC024771-2|AAK70659.1| 697|Caenorhabditis elegans Hypothetical ... 31 1.2
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 30 2.0
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 30 2.0
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 30 2.0
Z81521-1|CAB04226.1| 319|Caenorhabditis elegans Hypothetical pr... 29 3.5
AC084154-6|AAO91684.1| 319|Caenorhabditis elegans Serpentine re... 29 3.5
Z83219-5|CAM35834.1| 390|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 28 8.2
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 28 8.2
AC006617-5|AAF39775.1| 325|Caenorhabditis elegans Serpentine re... 28 8.2
>Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical
protein D2013.2 protein.
Length = 415
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 158 CDLKKKSN-NSLQMNPVASGDNVTTGLSAHRLKEELPLLVPCCEGRELQISEDLVRSGLS 334
C+ + K N + + P+A + TG++A L+E L LLV + R + I + VRS S
Sbjct: 352 CNARMKDNPQNFNLTPLAIPHEIHTGITAMHLQETLGLLVTSGQNRVIMIWD--VRSVCS 409
Query: 335 AIS 343
A S
Sbjct: 410 APS 412
>AC024771-2|AAK70659.1| 697|Caenorhabditis elegans Hypothetical
protein Y40B10A.4 protein.
Length = 697
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +2
Query: 80 MKLLQEYNNIIISATKHEIANMKDGSCDLKKKSNNSLQMNPVAS-GDNVTT---GLSAHR 247
+KL+ E++N++I KHEI + D D + K N MN V D +T ++ HR
Sbjct: 94 LKLIMEHHNVVIEQFKHEIVD-DDNDEDFQNKCIN--DMNDVLKFADCLTVSEMNITGHR 150
Query: 248 LKEELPLLV 274
EL L+
Sbjct: 151 TISELAELL 159
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical protein
B0024.14b protein.
Length = 960
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 170 KKSNNSLQMNPV---ASGDNVTTGLSAHRLKEELPLLVPCCEGRELQISEDLVRSGLSAI 340
KKSN + N V ASG T LSA + +P LV + RE + +E+L+++ S
Sbjct: 852 KKSNKLHKFNEVGQIASGGASTVRLSASKTIGSMPRLVDWKDTRE-ESTEELLKT--STN 908
Query: 341 SVKHDS 358
V+HDS
Sbjct: 909 HVRHDS 914
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 170 KKSNNSLQMNPV---ASGDNVTTGLSAHRLKEELPLLVPCCEGRELQISEDLVRSGLSAI 340
KKSN + N V ASG T LSA + +P LV + RE + +E+L+++ S
Sbjct: 852 KKSNKLHKFNEVGQIASGGASTVRLSASKTIGSMPRLVDWKDTRE-ESTEELLKT--STN 908
Query: 341 SVKHDS 358
V+HDS
Sbjct: 909 HVRHDS 914
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 170 KKSNNSLQMNPV---ASGDNVTTGLSAHRLKEELPLLVPCCEGRELQISEDLVRSGLSAI 340
KKSN + N V ASG T LSA + +P LV + RE + +E+L+++ S
Sbjct: 786 KKSNKLHKFNEVGQIASGGASTVRLSASKTIGSMPRLVDWKDTRE-ESTEELLKT--STN 842
Query: 341 SVKHDS 358
V+HDS
Sbjct: 843 HVRHDS 848
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 170 KKSNNSLQMNPV---ASGDNVTTGLSAHRLKEELPLLVPCCEGRELQISEDLVRSGLSAI 340
KKSN + N V ASG T LSA + +P LV + RE + +E+L+++ S
Sbjct: 786 KKSNKLHKFNEVGQIASGGASTVRLSASKTIGSMPRLVDWKDTRE-ESTEELLKT--STN 842
Query: 341 SVKHDS 358
V+HDS
Sbjct: 843 HVRHDS 848
>Z81521-1|CAB04226.1| 319|Caenorhabditis elegans Hypothetical
protein F32A11.1 protein.
Length = 319
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +2
Query: 500 LELLFRGYADLPARSLQENKESSQIIFPFAQSVTKAIKQENVDHDKGM 643
LE++ RGYA +PA ++ +S Q I +++ +++ + E V +G+
Sbjct: 181 LEVVRRGYARVPAPDQVKHLKSLQTIPAYSRLISRLLMSEKVADRRGV 228
>AC084154-6|AAO91684.1| 319|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 64 protein.
Length = 319
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 186 ELLDFFFRSHEPSFILAISCLVADIIILLY 97
+ L +FFR + P F L CL + IL+Y
Sbjct: 2 DFLQYFFRFYWPMFSLTCLCLFITLYILIY 31
>Z83219-5|CAM35834.1| 390|Caenorhabditis elegans Hypothetical
protein C31C9.8 protein.
Length = 390
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 194 MNPVASGDNVTTGLSAHRLKEELPLLVPCCEGRELQISEDLVRSGLSAIS 343
+ P+A + TG++A L+E L LLV R + I + VRS SA+S
Sbjct: 340 LTPLAIPHEIHTGITAIHLQETLGLLVTSGHNRVIMIWD--VRSVCSALS 387
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 551 ENKESSQIIFPFAQSVTKAIKQENVDHDKGMANFLHPIPETK 676
+NK+ QI+ Q+ +K + +ENV KGMA + I E K
Sbjct: 550 DNKKLQQILEEVRQNQSKVL-EENVKLRKGMAEAIEKIEEFK 590
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2
Query: 191 QMNPVASGDNVTTGLSAHRLKEELPLLVPCCEGRELQISEDLVRSGLSAISVKHDS 358
++ +ASG T LSA + +P LV + RE + +E+L+++ S V+HDS
Sbjct: 800 EVGQIASGGASTVRLSASKTIGSMPRLVDWKDTRE-ESTEELLKT--STNHVRHDS 852
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2
Query: 191 QMNPVASGDNVTTGLSAHRLKEELPLLVPCCEGRELQISEDLVRSGLSAISVKHDS 358
++ +ASG T LSA + +P LV + RE + +E+L+++ S V+HDS
Sbjct: 800 EVGQIASGGASTVRLSASKTIGSMPRLVDWKDTRE-ESTEELLKT--STNHVRHDS 852
>AC006617-5|AAF39775.1| 325|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 65 protein.
Length = 325
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 186 ELLDFFFRSHEPSFILAISCLVADIIILLYS 94
++L + FR + P F L CL + + IL+Y+
Sbjct: 2 DILQYLFRFYWPPFYLLSLCLFSTMYILIYN 32
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,776,287
Number of Sequences: 27780
Number of extensions: 374436
Number of successful extensions: 1001
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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