Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11b17
         (642 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1D6L6 Cluster: Putative uncharacterized protein; n=1; ...    36   1.1  
UniRef50_Q7RPW6 Cluster: Putative uncharacterized protein PY0133...    34   2.5  
UniRef50_A5KAP9 Cluster: Putative uncharacterized protein; n=2; ...    34   2.5  
UniRef50_P24870 Cluster: G2/mitotic-specific cyclin-3; n=2; Sacc...    33   4.4  

>UniRef50_Q1D6L6 Cluster: Putative uncharacterized protein; n=1;
           Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
           protein - Myxococcus xanthus (strain DK 1622)
          Length = 226

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +3

Query: 183 EQINPFTKKTVYTQTYPTKLIPAAPRKACCFYCS*STVHKIYSISSYAKQE 335
           ++++P T KT  T+ Y  +L  +AP +A  F     TVH ++ +    K E
Sbjct: 70  DRVSPLTNKTPATEFYEQRLAGSAPEEANAFRSFTETVHGLFEVRKLGKGE 120


>UniRef50_Q7RPW6 Cluster: Putative uncharacterized protein PY01338;
            n=14; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY01338 - Plasmodium yoelii yoelii
          Length = 3644

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -2

Query: 521  KFKSKERYCAKYLYDCKQIKYGFV 450
            K ++    C KYL+DCKQ+KY F+
Sbjct: 1508 KLRTNSILCLKYLFDCKQLKYWFL 1531


>UniRef50_A5KAP9 Cluster: Putative uncharacterized protein; n=2;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 4139

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -2

Query: 521  KFKSKERYCAKYLYDCKQIKYGFV 450
            K ++    C KYL+DCKQ+KY F+
Sbjct: 1526 KIRTNSILCLKYLFDCKQLKYWFL 1549


>UniRef50_P24870 Cluster: G2/mitotic-specific cyclin-3; n=2;
           Saccharomyces cerevisiae|Rep: G2/mitotic-specific
           cyclin-3 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 427

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -3

Query: 553 FNHLFRIYYCPNLNPKKDTVLNICMIVNKLSTDL*TSCGKLIFLLTFQEHYQDSSPK 383
           + H FR YY   L+P  D V ++ M+  +LS ++     KL  L     +Y D  P+
Sbjct: 140 WEHAFRTYYRTTLDPNDDDVYDVVMVA-ELSNEIFEYMRKLEDLYKPNPYYMDKQPE 195


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,019,018
Number of Sequences: 1657284
Number of extensions: 11833606
Number of successful extensions: 30887
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30887
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)