Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11b17
         (642 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT028858-1|ABI34239.1|  345|Drosophila melanogaster RT01134p pro...    30   2.3  
BT028826-1|ABI34207.1|  345|Drosophila melanogaster RT01034p pro...    30   2.3  
AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain ...    30   2.3  
AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC...    30   2.3  
AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB...    30   2.3  
AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA...    30   2.3  
AE014297-2414|AAF55473.2|  345|Drosophila melanogaster CG17801-P...    30   2.3  
DQ138932-1|ABA86538.1| 1387|Drosophila melanogaster CG12105 prot...    29   7.1  

>BT028858-1|ABI34239.1|  345|Drosophila melanogaster RT01134p
           protein.
          Length = 345

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 128 ERRQVCKNQYGSETSS-YRRTNQSVYKKNCIHADLPNEIDSSGTKKG 265
           +RR    N Y SET   ++  N  +   +  + +LPN++D+   KKG
Sbjct: 135 DRRNEPHNPYDSETPLIFKHKNPLIETPSFANENLPNKVDAKSPKKG 181


>BT028826-1|ABI34207.1|  345|Drosophila melanogaster RT01034p
           protein.
          Length = 345

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 128 ERRQVCKNQYGSETSS-YRRTNQSVYKKNCIHADLPNEIDSSGTKKG 265
           +RR    N Y SET   ++  N  +   +  + +LPN++D+   KKG
Sbjct: 135 DRRNEPHNPYDSETPLIFKHKNPLIETPSFANENLPNKVDAKSPKKG 181


>AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain
           protein SMRTER protein.
          Length = 3469

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 48  NCKRKGLSKMESNDFRPYFILIRKEEEKGDRFARINMEVKHQAIDEQI 191
           + KRK         F   F  +RK+ E  +RF R+   +K +A  E+I
Sbjct: 767 SAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEI 814


>AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC,
            isoform C protein.
          Length = 3604

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 48   NCKRKGLSKMESNDFRPYFILIRKEEEKGDRFARINMEVKHQAIDEQI 191
            + KRK         F   F  +RK+ E  +RF R+   +K +A  E+I
Sbjct: 902  SAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEI 949


>AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB,
            isoform B protein.
          Length = 3604

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 48   NCKRKGLSKMESNDFRPYFILIRKEEEKGDRFARINMEVKHQAIDEQI 191
            + KRK         F   F  +RK+ E  +RF R+   +K +A  E+I
Sbjct: 902  SAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEI 949


>AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA,
            isoform A protein.
          Length = 3604

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 48   NCKRKGLSKMESNDFRPYFILIRKEEEKGDRFARINMEVKHQAIDEQI 191
            + KRK         F   F  +RK+ E  +RF R+   +K +A  E+I
Sbjct: 902  SAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEI 949


>AE014297-2414|AAF55473.2|  345|Drosophila melanogaster CG17801-PA
           protein.
          Length = 345

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 128 ERRQVCKNQYGSETSS-YRRTNQSVYKKNCIHADLPNEIDSSGTKKG 265
           +RR    N Y SET   ++  N  +   +  + +LPN++D+   KKG
Sbjct: 135 DRRNEPHNPYDSETPLIFKHKNPLIETPSFANENLPNKVDAKSPKKG 181


>DQ138932-1|ABA86538.1| 1387|Drosophila melanogaster CG12105 protein.
          Length = 1387

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +3

Query: 6    LVKNSITHAKLLV-KNCKRKGLSKMESNDFRPYFILIRKEEEKGDRFARIN 155
            LVK   TH K LV KN   K   K E ND      ++R   +  +  +RIN
Sbjct: 1140 LVKKKPTHLKKLVRKNSIDKETEKQEKNDSSKLSNILRDRNKINELSSRIN 1190


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,933,358
Number of Sequences: 53049
Number of extensions: 532838
Number of successful extensions: 1260
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)