Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11b14
(800 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H8.07c |||prefoldin subunit 3|Schizosaccharomyces pombe|chr... 119 6e-28
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 29 0.58
SPAC926.02 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.1
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 27 3.1
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 27 3.1
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 27 4.1
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 4.1
SPAC17G6.09 |sec62||ER protein translocation subcomplex subunit ... 27 4.1
SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit Nse6|Schizosa... 26 5.4
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 26 5.4
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 26 5.4
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 7.2
SPAC977.14c |||aldo/keto reductase, unknown biological role|Schi... 26 7.2
SPCC576.13 |swc5||chromatin remodeling complex subunit Swc5|Schi... 26 7.2
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 26 7.2
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 25 9.5
SPCC24B10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 9.5
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 25 9.5
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 25 9.5
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 25 9.5
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 25 9.5
>SPAC3H8.07c |||prefoldin subunit 3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 169
Score = 119 bits (286), Expect = 6e-28
Identities = 71/171 (41%), Positives = 102/171 (59%), Gaps = 1/171 (0%)
Frame = +2
Query: 161 SNPKSYSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLR 340
SNP+ GIP A+F EF + ++ E L+ E KYK ME ++ + L
Sbjct: 4 SNPR---GIPPAQFF----EFKE--LSMEEAQGHLEKFQEAIAKYKFMETSVVRRVASLD 54
Query: 341 QQIPDLARTIEVIEKLKE-QKEEVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSL 517
+IPD+ +T++ ++ LKE Q + + L+D + KA V +V LWLGANVMLEY++
Sbjct: 55 DKIPDIRKTLQSVQFLKERQGDSFTVTYELNDTLNAKAEVEAKDNVYLWLGANVMLEYTV 114
Query: 518 EDAEKLLTTNMETAQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVKKRQ 670
E+AE LLT + +A+E L + DL+FLR Q TT EVN ARVYN+ V R+
Sbjct: 115 EEAEALLTQKLNSAEETLKACKEDLEFLRAQVTTMEVNTARVYNYTVLLRK 165
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 29.5 bits (63), Expect = 0.58
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 278 EKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKA 451
E++RKY + LA + + + P +A TI ++ LKE + EV ++D V A
Sbjct: 250 EEYRKYIEKDAALARRFQAVMVNEPSVADTISILRGLKE-RYEVHHGVRITDDALVTA 306
>SPAC926.02 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 443
Score = 27.1 bits (57), Expect = 3.1
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 200 FVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDL-ARTIEV 376
+VD E + P + + + S+D + R+ E T+ T ++ ++IPD+ AR +
Sbjct: 133 WVDLDREDLAYPEIQQALQSISHSIDLQERERIEWENTIQTSSQQKYEEIPDIQARRLYF 192
Query: 377 IEKLKE 394
IE KE
Sbjct: 193 IEADKE 198
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 263 LKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEE 406
L+SL++K + Y++ ATK + L ++ + I+ + K E KEE
Sbjct: 1095 LESLNDKDQLYQLQ----ATKNKELEAKVKECLNNIKSLTKELENKEE 1138
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 308 YTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQ 418
+ L TK +P ++ + + E + EQKEE+E+Q
Sbjct: 1215 WNLLTKPSPRSASLPKNSQPLSISEIMTEQKEEIESQ 1251
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 685 HYHLLSLTTTECVDC 729
+Y LL L TTECV+C
Sbjct: 759 NYGLLDLITTECVEC 773
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Frame = -3
Query: 537 SNFSASSRLYSNITLA----PSHKHTDFVGGTLA 448
SNFS ++ S+ T + P+H+HT F G TL+
Sbjct: 272 SNFSRATSSRSSKTRSVVYEPNHRHTSFFGDTLS 305
>SPAC17G6.09 |sec62||ER protein translocation subcomplex subunit
Sec62 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 273
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 155 EPSNPKSYSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVME 307
E PK Y G PE + E +K I + V + L K RK K++E
Sbjct: 58 EAYTPKKYKGFPEISSREEAIEVLKLLI-MNSMLVRVDKLPPKQRKQKLVE 107
>SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit
Nse6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 522
Score = 26.2 bits (55), Expect = 5.4
Identities = 23/88 (26%), Positives = 39/88 (44%)
Frame = -3
Query: 423 RNCVSTSSFCSFNFSITSIVRAKSGICCRNRLLLVANVYSITLYLRCFSSRLFKTTSTPS 244
+N S SS +N + S + R L V N+ L+ S++ F+T
Sbjct: 55 KNDSSNSSTYRWNIDLLSSTATIDDSVAKRRKLAVQNL------LQYDSTQTFQTGDEID 108
Query: 243 ALIGDFINSSTLSTNSASGIPEYDLGFE 160
LIG + S+ L+ ++ I + DL +E
Sbjct: 109 ELIGKSVGSNVLNVLRSNPIYDDDLRYE 136
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -3
Query: 324 LVANVYSITLYLRCFS-SRLFKTTSTPSALIGDFINSSTLSTNSASG 187
LV + +I L L+ + S K++STPS D + + TL++ ASG
Sbjct: 183 LVRALQTIELLLKKYEVSNTTKSSSTPSPSTDDNVPTGTLNSLIASG 229
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = -3
Query: 531 FSASSRLYSNITLAPSHKHTDFVGGTL 451
FSASSR S + S K TDFV TL
Sbjct: 127 FSASSRASSTKSTLSSVKETDFVTETL 153
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 7.2
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Frame = +2
Query: 191 EAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPD----- 355
EA F + DE P E + ++ L+EK K T+ T + ++Q+I
Sbjct: 590 EAPF-EEPDEPAHEPTEEEQEE--MRKLEEKIESTKYGLETIQTSGKTIKQRIEQKKTRL 646
Query: 356 --LARTIEVIEKLKEQKEEVETQFLLSDQ 436
L ++ ++ +KE+ ++ +Q L++DQ
Sbjct: 647 MILREELQELDAIKEEAQKQISQSLIADQ 675
>SPAC977.14c |||aldo/keto reductase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 351
Score = 25.8 bits (54), Expect = 7.2
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +2
Query: 248 GVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLL 427
G +L ++E +KY V TLAT + P + I +E+LK+ VE +
Sbjct: 275 GYKAILSRVEELAKKYNVSMATLATAWSLHKGDYPIVG--ISKVERLKDALAAVELKLSE 332
Query: 428 SD 433
D
Sbjct: 333 ED 334
>SPCC576.13 |swc5||chromatin remodeling complex subunit
Swc5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 215
Score = 25.8 bits (54), Expect = 7.2
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +2
Query: 143 GDGVEPSNPKSYSGIPEAEFVDNVD----EFMKSPI-NAEGVDVVLKSLDEKHRKYKVME 307
GD + + S + E EFV+ + + KS I +E DV LK++ +K+
Sbjct: 22 GDSTDTESSFSDADSSEEEFVEEKEASQVQSTKSKIATSESEDVTLKNIAKKN------- 74
Query: 308 YTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVE 412
KR R + IP + E IEK + EVE
Sbjct: 75 -----KRERNDKLIPQQSNESEAIEKPVQSTTEVE 104
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 185 IPEAEFVDNVDEFMKSPINAEGVDVVLKSLDE 280
IP + + +VD+ +SP+ VDV K +DE
Sbjct: 320 IPSEQQIISVDKATESPVQEVAVDVNEKPVDE 351
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 380 EKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLW 484
E+++ +E VE LLS + FVK + P K + L+
Sbjct: 186 EQIERLREVVELP-LLSPERFVKLGIDPPKGIMLY 219
>SPCC24B10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 199
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +2
Query: 380 EKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETA 559
++ + KE+ + Q D +K +PP K V W + ++ AE L N E +
Sbjct: 39 DRFRGTKEDEKKQIADKDMAAMKVVIPPKKRVSKWKDIQLFEKF----AEPSL--NREDS 92
Query: 560 QENLNQVEHDL 592
+ +N++ L
Sbjct: 93 LKMINEIRKSL 103
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +2
Query: 410 ETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYS 514
E Q L + VK PP + +W+G +++ S
Sbjct: 316 EIQALAPSSMKVKIVAPPERKYSVWIGGSILASLS 350
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 25.4 bits (53), Expect = 9.5
Identities = 21/98 (21%), Positives = 46/98 (46%)
Frame = +2
Query: 263 LKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVF 442
++ L E + K + +R + Q+ +++ ++ +EKL E+K+E + S Q F
Sbjct: 171 IQDLKELYEKSEHGAKNWERERETFQNQVSQMSKQLDSLEKLCERKDEE----IRSSQAF 226
Query: 443 VKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMET 556
N+ + N+ L+ L+ ++ L TN+ +
Sbjct: 227 ---NMTLREENDTLAAQNLDLQTQLDRLQRELDTNIRS 261
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.4 bits (53), Expect = 9.5
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 203 VDNVDEFMKSPINAEG-VDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVI 379
+D++D K+ A+ ++ L S R +M T RRR Q + DL + ++I
Sbjct: 736 MDDLDVIFKAKPTADADIEQALLSKQRISRAKTMM--TPFVLRRRKNQVLNDLPKKTQII 793
Query: 380 EKLKEQKEEVE 412
E K + ++E
Sbjct: 794 EHCKLSENQLE 804
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 155 EPSNPKSYSGIPEAEF 202
EPSN K YS IP EF
Sbjct: 181 EPSNMKDYSEIPVEEF 196
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,897,796
Number of Sequences: 5004
Number of extensions: 56921
Number of successful extensions: 212
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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