Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11b14
(800 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y17394-1|CAA76761.1| 197|Homo sapiens prefoldin subunit 3 protein. 213 8e-55
BT019604-1|AAV38411.1| 197|Homo sapiens von Hippel-Lindau bindi... 213 8e-55
BC046094-1|AAH46094.1| 197|Homo sapiens von Hippel-Lindau bindi... 213 8e-55
AL356738-8|CAI41469.1| 197|Homo sapiens von Hippel-Lindau bindi... 211 2e-54
U56833-1|AAC50617.1| 166|Homo sapiens VHL binding protein-1 pro... 198 2e-50
U96759-1|AAC23907.1| 160|Homo sapiens von Hippel-Lindau binding... 190 4e-48
CR541932-1|CAG46730.1| 160|Homo sapiens VBP1 protein. 190 4e-48
BC125086-1|AAI25087.1| 634|Homo sapiens CCDC41 protein protein. 30 8.5
BC040136-1|AAH40136.2| 572|Homo sapiens chromosome 1 open readi... 30 8.5
BC035617-1|AAH35617.1| 642|Homo sapiens NDC80 homolog, kinetoch... 30 8.5
BC017262-1|AAH17262.1| 144|Homo sapiens C1orf2 protein protein. 30 8.5
BC011621-1|AAH11621.1| 728|Homo sapiens hook homolog 1 (Drosoph... 30 8.5
BC008854-1|AAH08854.1| 242|Homo sapiens C1orf2 protein protein. 30 8.5
AL713999-25|CAI95092.1| 572|Homo sapiens chromosome 1 open read... 30 8.5
AL035416-6|CAI22779.1| 728|Homo sapiens hook homolog 1 (Drosoph... 30 8.5
AF044923-1|AAC09298.1| 728|Homo sapiens hook1 protein protein. 30 8.5
AF017790-1|AAB80726.1| 642|Homo sapiens retinoblastoma-associat... 30 8.5
AB040901-1|BAA95992.1| 985|Homo sapiens KIAA1468 protein protein. 30 8.5
>Y17394-1|CAA76761.1| 197|Homo sapiens prefoldin subunit 3 protein.
Length = 197
Score = 213 bits (519), Expect = 8e-55
Identities = 100/179 (55%), Positives = 138/179 (77%), Gaps = 3/179 (1%)
Frame = +2
Query: 140 EGDGVEPSNPKSYSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLA 319
+G+ + + + GIPEA FV++VD FMK P N E D VLK LDE+++KYK ME LA
Sbjct: 10 KGEMATGNGRRLHLGIPEAVFVEDVDSFMKQPGN-ETADTVLKKLDEQYQKYKFMELNLA 68
Query: 320 TKRRRLRQQIPDLARTIEVIEKLKEQKEE---VETQFLLSDQVFVKANVPPTKSVCLWLG 490
K+RRL+ QIP++ +T+E+++ ++++KE +ET+FLL+D ++ KA+VPPT VCLWLG
Sbjct: 69 QKKRRLKGQIPEIKQTLEILKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLG 128
Query: 491 ANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVKKR 667
ANVMLEY +++A+ LL N+ TA +NL+ +E DLDFLRDQ TTTEVNMARVYNWDVK+R
Sbjct: 129 ANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 187
>BT019604-1|AAV38411.1| 197|Homo sapiens von Hippel-Lindau binding
protein 1 protein.
Length = 197
Score = 213 bits (519), Expect = 8e-55
Identities = 100/179 (55%), Positives = 138/179 (77%), Gaps = 3/179 (1%)
Frame = +2
Query: 140 EGDGVEPSNPKSYSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLA 319
+G+ + + + GIPEA FV++VD FMK P N E D VLK LDE+++KYK ME LA
Sbjct: 10 KGEMATGNGRRLHLGIPEAVFVEDVDSFMKQPGN-ETADTVLKKLDEQYQKYKFMELNLA 68
Query: 320 TKRRRLRQQIPDLARTIEVIEKLKEQKEE---VETQFLLSDQVFVKANVPPTKSVCLWLG 490
K+RRL+ QIP++ +T+E+++ ++++KE +ET+FLL+D ++ KA+VPPT VCLWLG
Sbjct: 69 QKKRRLKGQIPEIKQTLEILKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLG 128
Query: 491 ANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVKKR 667
ANVMLEY +++A+ LL N+ TA +NL+ +E DLDFLRDQ TTTEVNMARVYNWDVK+R
Sbjct: 129 ANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 187
>BC046094-1|AAH46094.1| 197|Homo sapiens von Hippel-Lindau binding
protein 1 protein.
Length = 197
Score = 213 bits (519), Expect = 8e-55
Identities = 100/179 (55%), Positives = 138/179 (77%), Gaps = 3/179 (1%)
Frame = +2
Query: 140 EGDGVEPSNPKSYSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLA 319
+G+ + + + GIPEA FV++VD FMK P N E D VLK LDE+++KYK ME LA
Sbjct: 10 KGEMATGNGRRLHLGIPEAVFVEDVDSFMKQPGN-ETADTVLKKLDEQYQKYKFMELNLA 68
Query: 320 TKRRRLRQQIPDLARTIEVIEKLKEQKEE---VETQFLLSDQVFVKANVPPTKSVCLWLG 490
K+RRL+ QIP++ +T+E+++ ++++KE +ET+FLL+D ++ KA+VPPT VCLWLG
Sbjct: 69 QKKRRLKGQIPEIKQTLEILKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLG 128
Query: 491 ANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVKKR 667
ANVMLEY +++A+ LL N+ TA +NL+ +E DLDFLRDQ TTTEVNMARVYNWDVK+R
Sbjct: 129 ANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 187
>AL356738-8|CAI41469.1| 197|Homo sapiens von Hippel-Lindau binding
protein 1 protein.
Length = 197
Score = 211 bits (516), Expect = 2e-54
Identities = 99/179 (55%), Positives = 138/179 (77%), Gaps = 3/179 (1%)
Frame = +2
Query: 140 EGDGVEPSNPKSYSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLA 319
+G+ + + + GIPEA FV++VD FMK P N E D VLK LDE+++KYK ME LA
Sbjct: 10 KGEMATGNGRRLHLGIPEAVFVEDVDSFMKQPGN-ETADTVLKKLDEQYQKYKFMELNLA 68
Query: 320 TKRRRLRQQIPDLARTIEVIEKLKEQKEE---VETQFLLSDQVFVKANVPPTKSVCLWLG 490
K+RRL+ QIP++ +T+E+++ ++++KE +ET+FLL+D ++ KA+VPPT +CLWLG
Sbjct: 69 QKKRRLKGQIPEIKQTLEILKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKMCLWLG 128
Query: 491 ANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVKKR 667
ANVMLEY +++A+ LL N+ TA +NL+ +E DLDFLRDQ TTTEVNMARVYNWDVK+R
Sbjct: 129 ANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 187
>U56833-1|AAC50617.1| 166|Homo sapiens VHL binding protein-1
protein.
Length = 166
Score = 198 bits (483), Expect = 2e-50
Identities = 92/157 (58%), Positives = 125/157 (79%), Gaps = 3/157 (1%)
Frame = +2
Query: 206 DNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEK 385
++VD FMK P N E D VLK LDE+++KYK ME LA K+RRL+ QIP++ +T+E+++
Sbjct: 1 EDVDSFMKQPGN-ETADTVLKKLDEQYQKYKFMELNLAQKKRRLKGQIPEIKQTLEILKY 59
Query: 386 LKEQKEE---VETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMET 556
++++KE +ET+FLL+D ++ KA+VPPT VCLWLGANVMLEY +++A+ LL N+ T
Sbjct: 60 MQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLST 119
Query: 557 AQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVKKR 667
A +NL+ +E DLDFLRDQ TTTEVNMARVYNWDVK+R
Sbjct: 120 ATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 156
>U96759-1|AAC23907.1| 160|Homo sapiens von Hippel-Lindau binding
protein protein.
Length = 160
Score = 190 bits (464), Expect = 4e-48
Identities = 89/151 (58%), Positives = 120/151 (79%), Gaps = 3/151 (1%)
Frame = +2
Query: 224 MKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKE 403
MK P N E D VLK LDE+++KYK ME LA K+RRL+ QIP++ +T+E+++ ++++KE
Sbjct: 1 MKQPGN-ETADTVLKKLDEQYQKYKFMELNLAQKKRRLKGQIPEIKQTLEILKYMQKKKE 59
Query: 404 E---VETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLN 574
+ET+FLL+D ++ KA+VPPT VCLWLGANVMLEY +++A+ LL N+ TA +NL+
Sbjct: 60 STNSMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLSTATKNLD 119
Query: 575 QVEHDLDFLRDQCTTTEVNMARVYNWDVKKR 667
+E DLDFLRDQ TTTEVNMARVYNWDVK+R
Sbjct: 120 SLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 150
>CR541932-1|CAG46730.1| 160|Homo sapiens VBP1 protein.
Length = 160
Score = 190 bits (464), Expect = 4e-48
Identities = 89/151 (58%), Positives = 120/151 (79%), Gaps = 3/151 (1%)
Frame = +2
Query: 224 MKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKE 403
MK P N E D VLK LDE+++KYK ME LA K+RRL+ QIP++ +T+E+++ ++++KE
Sbjct: 1 MKQPGN-ETADTVLKKLDEQYQKYKFMELNLAQKKRRLKGQIPEIKQTLEILKYMQKKKE 59
Query: 404 E---VETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLN 574
+ET+FLL+D ++ KA+VPPT VCLWLGANVMLEY +++A+ LL N+ TA +NL+
Sbjct: 60 STNSMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLSTATKNLD 119
Query: 575 QVEHDLDFLRDQCTTTEVNMARVYNWDVKKR 667
+E DLDFLRDQ TTTEVNMARVYNWDVK+R
Sbjct: 120 SLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 150
>BC125086-1|AAI25087.1| 634|Homo sapiens CCDC41 protein protein.
Length = 634
Score = 30.3 bits (65), Expect = 8.5
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +2
Query: 275 DEKHR--KYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVK 448
+EK+ K K+ +A K+R+ + L R E +E L+ +KEE+ET+ +QV +
Sbjct: 542 EEKYNQAKEKLQRAAIAQKKRKSLHE-NKLKRLQEKVEVLEAKKEELETE----NQVLNR 596
Query: 449 ANVP 460
NVP
Sbjct: 597 QNVP 600
>BC040136-1|AAH40136.2| 572|Homo sapiens chromosome 1 open reading
frame 2 protein.
Length = 572
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = -3
Query: 444 TNT*SLRRNCVSTSSFCSFNFSITSIVRAKSGICCRNRLLLVANVYSITL 295
T T S++R+C S + F + FS+ + + IC + ++ ++S+ L
Sbjct: 59 TTTESIKRSCPSWAGFSNLLFSVCGLTICAAIICTLSAIVCCIQIFSLDL 108
>BC035617-1|AAH35617.1| 642|Homo sapiens NDC80 homolog, kinetochore
complex component (S. cerevisiae) protein.
Length = 642
Score = 30.3 bits (65), Expect = 8.5
Identities = 20/82 (24%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Frame = +2
Query: 191 EAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRR----LRQQIPDL 358
E E ++ ++S +N +G+ + LD R+Y+++ T +RR+ L++ + +
Sbjct: 531 ELESLEKHKHLLESTVN-QGLSEAMNELDAVQREYQLVVQTTTEERRKVGNNLQRLLEMV 589
Query: 359 ARTIEVIEK-LKEQKEEVETQF 421
A + +EK L+EQ +V+ ++
Sbjct: 590 ATHVGSVEKHLEEQIAKVDREY 611
>BC017262-1|AAH17262.1| 144|Homo sapiens C1orf2 protein protein.
Length = 144
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = -3
Query: 444 TNT*SLRRNCVSTSSFCSFNFSITSIVRAKSGICCRNRLLLVANVYSITL 295
T T S++R+C S + F + FS+ + + IC + ++ ++S+ L
Sbjct: 59 TTTESIKRSCPSWAGFSNLLFSVCGLTICAAIICTLSAIVCCIQIFSLDL 108
>BC011621-1|AAH11621.1| 728|Homo sapiens hook homolog 1
(Drosophila) protein.
Length = 728
Score = 30.3 bits (65), Expect = 8.5
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +2
Query: 245 EGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEK-LKEQKEEVE 412
E ++ + + L++KHRK +E T++R +++I +L + IE ++K L+EQ + E
Sbjct: 487 ERIEELQEQLEQKHRKMNELE----TEQRLSKERIRELQQQIEDLQKSLQEQGSKSE 539
>BC008854-1|AAH08854.1| 242|Homo sapiens C1orf2 protein protein.
Length = 242
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = -3
Query: 444 TNT*SLRRNCVSTSSFCSFNFSITSIVRAKSGICCRNRLLLVANVYSITL 295
T T S++R+C S + F + FS+ + + IC + ++ ++S+ L
Sbjct: 59 TTTESIKRSCPSWAGFSNLLFSVCGLTICAAIICTLSAIVCCIQIFSLDL 108
>AL713999-25|CAI95092.1| 572|Homo sapiens chromosome 1 open reading
frame 2 protein.
Length = 572
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = -3
Query: 444 TNT*SLRRNCVSTSSFCSFNFSITSIVRAKSGICCRNRLLLVANVYSITL 295
T T S++R+C S + F + FS+ + + IC + ++ ++S+ L
Sbjct: 59 TTTESIKRSCPSWAGFSNLLFSVCGLTICAAIICTLSAIVCCIQIFSLDL 108
>AL035416-6|CAI22779.1| 728|Homo sapiens hook homolog 1
(Drosophila) protein.
Length = 728
Score = 30.3 bits (65), Expect = 8.5
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +2
Query: 245 EGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEK-LKEQKEEVE 412
E ++ + + L++KHRK +E T++R +++I +L + IE ++K L+EQ + E
Sbjct: 487 ERIEELQEQLEQKHRKMNELE----TEQRLSKERIRELQQQIEDLQKSLQEQGSKSE 539
>AF044923-1|AAC09298.1| 728|Homo sapiens hook1 protein protein.
Length = 728
Score = 30.3 bits (65), Expect = 8.5
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +2
Query: 245 EGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEK-LKEQKEEVE 412
E ++ + + L++KHRK +E T++R +++I +L + IE ++K L+EQ + E
Sbjct: 487 ERIEELQEQLEQKHRKMNELE----TEQRLSKERIRELQQQIEDLQKSLQEQGSKSE 539
>AF017790-1|AAB80726.1| 642|Homo sapiens retinoblastoma-associated
protein HEC protein.
Length = 642
Score = 30.3 bits (65), Expect = 8.5
Identities = 20/82 (24%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Frame = +2
Query: 191 EAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRR----LRQQIPDL 358
E E ++ ++S +N +G+ + LD R+Y+++ T +RR+ L++ + +
Sbjct: 531 ELESLEKHKHLLESTVN-QGLSEAMNELDAVQREYQLVVQTTTEERRKVGNNLQRLLEMV 589
Query: 359 ARTIEVIEK-LKEQKEEVETQF 421
A + +EK L+EQ +V+ ++
Sbjct: 590 ATHVGSVEKHLEEQIAKVDREY 611
>AB040901-1|BAA95992.1| 985|Homo sapiens KIAA1468 protein protein.
Length = 985
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 449 ANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLRDQ 610
+N+PPT N ML LED LL + + E + +++ ++DFL+++
Sbjct: 76 SNLPPTLETPQ-PAENSMLVQKLEDKISLLNSEKWSLMEQIRRLKSEMDFLKNE 128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,440,825
Number of Sequences: 237096
Number of extensions: 1824928
Number of successful extensions: 4854
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4843
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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