Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11b14
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81587-7|CAB04707.1| 185|Caenorhabditis elegans Hypothetical pr... 137 1e-32
Z71177-4|CAA94870.1| 529|Caenorhabditis elegans Hypothetical pr... 34 0.10
AC006625-4|AAK68276.1| 446|Caenorhabditis elegans Hypothetical ... 33 0.24
X70836-1|CAA50184.1| 636|Caenorhabditis elegans Cytoplasmic int... 31 0.73
U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate fi... 31 0.73
U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate fi... 31 0.73
Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical pr... 31 0.96
AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical... 31 0.96
X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic int... 30 2.2
U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate fi... 30 2.2
AF106582-4|AAC78219.1| 456|Caenorhabditis elegans Hypothetical ... 30 2.2
AC024787-1|AAF60607.2| 469|Caenorhabditis elegans Hypothetical ... 30 2.2
Z69716-3|CAA93529.1| 335|Caenorhabditis elegans Hypothetical pr... 29 2.9
U80842-1|AAB37946.2| 1000|Caenorhabditis elegans Guanylyl cyclas... 29 3.9
AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical ... 29 3.9
AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian el... 29 3.9
U21317-4|AAA62523.1| 719|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical... 28 6.8
AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyc... 28 6.8
Z81091-4|CAD56588.1| 287|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical p... 28 8.9
AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger p... 28 8.9
>Z81587-7|CAB04707.1| 185|Caenorhabditis elegans Hypothetical
protein T06G6.9 protein.
Length = 185
Score = 137 bits (331), Expect = 1e-32
Identities = 68/172 (39%), Positives = 116/172 (67%), Gaps = 4/172 (2%)
Frame = +2
Query: 173 SYSGIPEAEFVDNVDEFM-KSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQI 349
S GIP++E +++V+ ++ K ++ E +VVL+ EK+ KYK +E ++ ++ R+ ++I
Sbjct: 9 SARGIPKSELIEDVESWLTKEKLSIEEAEVVLR---EKYGKYKYVESSMLAQKVRMSEKI 65
Query: 350 PDLARTIEVIEKLKEQK---EEVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLE 520
P+ ++ +I+ L ++ E ET FLLSD V+ KA V + V +WLGANVM+EY LE
Sbjct: 66 PEFENSLSIIDTLIAKRAADESFETTFLLSDDVYTKATVQKPEKVSIWLGANVMVEYDLE 125
Query: 521 DAEKLLTTNMETAQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVKKRQAA 676
+A KLL N + Q+ ++++ ++L +++DQ TTTEVNM+ + N+ V KR+AA
Sbjct: 126 NARKLLDKNRGSVQKVVDELTNELSYIKDQITTTEVNMSHIVNFGVNKRRAA 177
>Z71177-4|CAA94870.1| 529|Caenorhabditis elegans Hypothetical
protein AC3.7 protein.
Length = 529
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 488 GANVMLEYSLEDAEKLLTTNME-TAQENLNQVEHDL-DFLRDQCTTTEVNMARVYNWDVK 661
GA V +Y LEDAEKL + E E N+ H + D LR+Q + N+ + + K
Sbjct: 412 GATVFDKYDLEDAEKLTSAIKEIIGNEEFNKKSHHIADLLRNQPIDPKANLLKHVEFSAK 471
>AC006625-4|AAK68276.1| 446|Caenorhabditis elegans Hypothetical
protein C55B7.5 protein.
Length = 446
Score = 33.1 bits (72), Expect = 0.24
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 371 EVIEKLKEQKEEVETQFLLSD---QVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLT 541
+V+E+ KE +++E L F A+V T V + +GAN E S+ AEK+L
Sbjct: 32 KVLERAKEYSKKLEAPILAKICEVGYFCGAHVVRTNQVTMEMGANYYGECSIHTAEKILD 91
Query: 542 TNMETAQENLNQVEHDLDFLR 604
+ E Q E LD +R
Sbjct: 92 RRV---SEMRRQREEGLDSIR 109
>X70836-1|CAA50184.1| 636|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 636
Score = 31.5 bits (68), Expect = 0.73
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +2
Query: 371 EVIEKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWL-GANVMLEYSLEDAEKLLTTN 547
E I K++++ V + + ++ V +S + G N LE ++D L N
Sbjct: 285 EQIRKIQDESVRVNPDLYKEELISIRTTVTNVRSRLAEVEGRNFFLERLIDD----LKNN 340
Query: 548 METAQENLNQVEHDLDF--LRDQCTTTEVNMARVYNWDVKKR 667
E ++ E D LRDQCT + M ++ + ++ R
Sbjct: 341 EEAKFFEISLAERDAQIATLRDQCTELSIQMEKLCDNEISLR 382
>U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate
filament, c protein2, isoform a protein.
Length = 1128
Score = 31.5 bits (68), Expect = 0.73
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +2
Query: 371 EVIEKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWL-GANVMLEYSLEDAEKLLTTN 547
E I K++++ V + + ++ V +S + G N LE ++D L N
Sbjct: 911 EQIRKIQDESVRVNPDLYKEELISIRTTVTNVRSRLAEVEGRNFFLERLIDD----LKNN 966
Query: 548 METAQENLNQVEHDLDF--LRDQCTTTEVNMARVYNWDVKKR 667
E ++ E D LRDQCT + M ++ + ++ R
Sbjct: 967 EEAKFFEISLAERDAQIATLRDQCTELSIQMEKLCDNEISLR 1008
>U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate
filament, c protein2, isoform b protein.
Length = 1248
Score = 31.5 bits (68), Expect = 0.73
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +2
Query: 371 EVIEKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWL-GANVMLEYSLEDAEKLLTTN 547
E I K++++ V + + ++ V +S + G N LE ++D L N
Sbjct: 911 EQIRKIQDESVRVNPDLYKEELISIRTTVTNVRSRLAEVEGRNFFLERLIDD----LKNN 966
Query: 548 METAQENLNQVEHDLDF--LRDQCTTTEVNMARVYNWDVKKR 667
E ++ E D LRDQCT + M ++ + ++ R
Sbjct: 967 EEAKFFEISLAERDAQIATLRDQCTELSIQMEKLCDNEISLR 1008
>Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical
protein T23G7.3 protein.
Length = 339
Score = 31.1 bits (67), Expect = 0.96
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +2
Query: 275 DEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKA 451
+E+ + K +R+RLR++ D T+E +E + E K+EV+ + + D+ F +A
Sbjct: 235 EEESDEEKARRKAEKKERKRLRREQRDKEETLETVETILEVKQEVKEEII--DEEFDEA 291
>AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical
protein Y41D4B.11 protein.
Length = 349
Score = 31.1 bits (67), Expect = 0.96
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 245 EGVDVVLKSLDEKHRKYKVMEYT-LATKRRRLRQQIPDLARTIEVIEKLKEQKE 403
E +D K +++ ++ K E + K + R++ AR +E +EKLKEQK+
Sbjct: 127 EEIDADYKIIEDAEKRKKEQEKREIENKIKEARKKREQEARRLEEVEKLKEQKK 180
>X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 575
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +2
Query: 488 GANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLRDQ 610
G N++LE +ED + +M + +++LN + ++ LRD+
Sbjct: 347 GRNLLLEKQIEDLNYQMEEDMRSYEQSLNDKDTSINKLRDE 387
>U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate
filament, a protein 4 protein.
Length = 558
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +2
Query: 488 GANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLRDQ 610
G N++LE +ED + +M + +++LN + ++ LRD+
Sbjct: 330 GRNLLLEKQIEDLNYQMEEDMRSYEQSLNDKDTSINKLRDE 370
>AF106582-4|AAC78219.1| 456|Caenorhabditis elegans Hypothetical
protein W05F2.6 protein.
Length = 456
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 290 KYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQ 418
K K + + L T ++L++ LAR EKLKE++ +++TQ
Sbjct: 238 KLKFLAFPLTTGFKKLQKLQDPLARIKLATEKLKERRAQLDTQ 280
>AC024787-1|AAF60607.2| 469|Caenorhabditis elegans Hypothetical
protein Y46C8AR.1 protein.
Length = 469
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -3
Query: 228 FINSSTLSTNSASGIPEYDLGFEGSTPSPSIFIYCEVYIQFLEN 97
F + S S+ +S +P+Y LGFE +T ++F EV +F +N
Sbjct: 228 FSDYSLFSSYVSSHLPDYTLGFEEATTGSNVF---EVINKFYDN 268
>Z69716-3|CAA93529.1| 335|Caenorhabditis elegans Hypothetical
protein C04B4.3 protein.
Length = 335
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +2
Query: 287 RKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKANVPPT 466
RK +E L +K+ L+ + + + K ++ E + + + D+VF+K N+
Sbjct: 220 RKINPLENQLESKKSFLQTKYSKFLTKLNKVHK--KEAEFIASIWSKDDEVFLKGNLVWG 277
Query: 467 KSVCLWLGANVMLEY 511
K L G+N+ EY
Sbjct: 278 KQTSLVPGSNIWKEY 292
>U80842-1|AAB37946.2| 1000|Caenorhabditis elegans Guanylyl cyclase
protein 15 protein.
Length = 1000
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 290 KYKVMEYTLATKRRRLRQQIPDLARTIEVIEK-LKEQKEEVETQFLLSDQVFVKANVPPT 466
K K+ T+ KR + + + + + +EK + E+ EE+E + S+ + +K +P
Sbjct: 701 KRKLKPLTIGLKRTIMDNMVSMIEKYTDKLEKDIAERNEELEAEKAKSEAL-LKMMLPEV 759
Query: 467 KSVCLWLGANVMLE 508
+ L LG+NV E
Sbjct: 760 VADSLKLGSNVSAE 773
>AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical
protein Y45F10D.9 protein.
Length = 492
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 308 YTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFL-LSDQV 439
Y A + LRQ+ DL + +E + +KE+ EE+ +F L D+V
Sbjct: 191 YKSADELASLRQKCGDLEKQVEKLSGVKEEFEEMSEKFKELEDEV 235
>AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian
elks/cast/erc/rab6 interactingprotein homolog protein 1
protein.
Length = 836
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 542 TNMETAQENLNQVEHDLDFLRDQCTTTE 625
T M+TA+E N++ L L+DQ T E
Sbjct: 363 TRMQTAEETANEMRGHLQLLKDQLTNRE 390
>U21317-4|AAA62523.1| 719|Caenorhabditis elegans Hypothetical
protein B0495.2 protein.
Length = 719
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 158 PSNPKSYSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDE 280
P+ PK YS D+ D KSP AE D V++ LD+
Sbjct: 246 PAGPKKYSKFESDPESDHDDTKPKSPGKAEDDDDVIEVLDD 286
>Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 272 LDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKA 451
++EK + + E + KRR +++ + +E E+ +E +E+ E Q S + FVKA
Sbjct: 130 VEEKSEESEEEEEKIKKKRRGKKEKKEKVVEEVEEEEEHEETEEQEEEQ---SGEKFVKA 186
Query: 452 N 454
N
Sbjct: 187 N 187
>AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 272 LDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKA 451
++EK + + E + KRR +++ + +E E+ +E +E+ E Q S + FVKA
Sbjct: 130 VEEKSEESEEEEEKIKKKRRGKKEKKEKVVEEVEEEEEHEETEEQEEEQ---SGEKFVKA 186
Query: 452 N 454
N
Sbjct: 187 N 187
>AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl
cyclase protein 21 protein.
Length = 1119
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 290 KYKVMEYTLATKRRRLRQQIPDLARTIEVIEK-LKEQKEEVETQFLLSDQVFVKANVPPT 466
K K+ T+ KR + + + + + +EK + E+ EE+E + S+ + +K +P
Sbjct: 762 KRKLKPLTIGLKRTIMDNMVSMIEKYTDKLEKDIAERNEELEGEKAKSEAL-LKMMLPEV 820
Query: 467 KSVCLWLGANVMLE 508
+ L LG+NV E
Sbjct: 821 VADSLKLGSNVSAE 834
>Z81091-4|CAD56588.1| 287|Caenorhabditis elegans Hypothetical
protein F55H12.5 protein.
Length = 287
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = -3
Query: 279 SSRLFKTTSTPSALIGDFINSSTLSTNSASGIPEYDLGFEGSTPSPSIFIY 127
S+R KTT DFINS T S + +G+ E+ E SP+ F Y
Sbjct: 25 STRKKKTTMLSPKKFCDFINSKTNSKSFEAGVAEFYK--ETYLESPTFFNY 73
>Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical
protein F58E6.1b protein.
Length = 764
Score = 27.9 bits (59), Expect = 8.9
Identities = 28/109 (25%), Positives = 48/109 (44%)
Frame = +2
Query: 278 EKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKANV 457
E ++ +K +L + + +Q+P + RT+++ E + E+ E Q L+SD + V A
Sbjct: 175 EAYQGFKECADSLLSGKIAQNEQLPFIQRTLQICENVILNFED-EKQHLMSDVLLVWAMK 233
Query: 458 PPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLR 604
S+ L Y D L+ E E L Q LD+L+
Sbjct: 234 QQKLSIATL--HTQQLHYKELD---LINLQFEYFGELLQQTLSGLDYLK 277
>Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical
protein F58E6.1a protein.
Length = 966
Score = 27.9 bits (59), Expect = 8.9
Identities = 28/109 (25%), Positives = 48/109 (44%)
Frame = +2
Query: 278 EKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKANV 457
E ++ +K +L + + +Q+P + RT+++ E + E+ E Q L+SD + V A
Sbjct: 175 EAYQGFKECADSLLSGKIAQNEQLPFIQRTLQICENVILNFED-EKQHLMSDVLLVWAMK 233
Query: 458 PPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLR 604
S+ L Y D L+ E E L Q LD+L+
Sbjct: 234 QQKLSIATL--HTQQLHYKELD---LINLQFEYFGELLQQTLSGLDYLK 277
>Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +2
Query: 287 RKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQ 418
RK++ + + + R ++QI D AR IE+ + QK+++++Q
Sbjct: 326 RKWEEYQKKIREEDDREKRQIQDKARAIELRNQQVYQKQQIQSQ 369
>Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +2
Query: 287 RKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQ 418
RK++ + + + R ++QI D AR IE+ + QK+++++Q
Sbjct: 326 RKWEEYQKKIREEDDREKRQIQDKARAIELRNQQVYQKQQIQSQ 369
>AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger
protein STAT-B protein.
Length = 810
Score = 27.9 bits (59), Expect = 8.9
Identities = 28/109 (25%), Positives = 48/109 (44%)
Frame = +2
Query: 278 EKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKANV 457
E ++ +K +L + + +Q+P + RT+++ E + E+ E Q L+SD + V A
Sbjct: 221 EAYQGFKECADSLLSGKIAQNEQLPFIQRTLQICENVILNFED-EKQHLMSDVLLVWAMK 279
Query: 458 PPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLR 604
S+ L Y D L+ E E L Q LD+L+
Sbjct: 280 QQKLSIATL--HTQQLHYKELD---LINLQFEYFGELLQQTLSGLDYLK 323
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,567,948
Number of Sequences: 27780
Number of extensions: 299644
Number of successful extensions: 1140
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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